RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 C2CD5Q86YS7 1000 aa23.5■■□□□ 1.35
LMO1-203ENST00000524379 ANKRD44Q8N8A2 993 aa23.5■■□□□ 1.35
LMO1-203ENST00000524379 SRGNP10124 158 aa23.49■■□□□ 1.35
LMO1-203ENST00000524379 PDE6BP35913 854 aa23.49■■□□□ 1.35
LMO1-203ENST00000524379 CTSWP56202 376 aa23.49■■□□□ 1.35
LMO1-203ENST00000524379 NLRP3Q96P20 1036 aa23.49■■□□□ 1.35
LMO1-203ENST00000524379 CRBNQ96SW2 442 aa23.49■■□□□ 1.35
LMO1-203ENST00000524379 CENPBP07199 599 aaPredicted RBP23.48■■□□□ 1.35
LMO1-203ENST00000524379 TGFB2P61812 414 aa23.48■■□□□ 1.35
LMO1-203ENST00000524379 TTLL11Q8NHH1 800 aa23.48■■□□□ 1.35
LMO1-203ENST00000524379 CCDC85AQ96PX6 553 aaPredicted RBP23.48■■□□□ 1.35
LMO1-203ENST00000524379 LRRFIP2Q9Y608 721 aaKnown RBP23.48■■□□□ 1.35
LMO1-203ENST00000524379 CSF1RP07333 972 aa23.47■■□□□ 1.35
LMO1-203ENST00000524379 UBTFL1P0CB47 393 aaPredicted RBP23.47■■□□□ 1.35
LMO1-203ENST00000524379 BICC1Q9H694 974 aaKnown RBP23.47■■□□□ 1.35
LMO1-203ENST00000524379 BRCA1P38398 1863 aaKnown RBP23.47■■□□□ 1.35
LMO1-203ENST00000524379 MYH3P11055 1940 aa23.47■■□□□ 1.35
LMO1-203ENST00000524379 GNAI3P08754 354 aa23.46■■□□□ 1.35
LMO1-203ENST00000524379 HOXA10P31260 410 aaPredicted RBP23.46■■□□□ 1.35
LMO1-203ENST00000524379 RABL6Q3YEC7 729 aaPredicted RBP23.46■■□□□ 1.35
LMO1-203ENST00000524379 SLC51AQ86UW1 340 aa23.46■■□□□ 1.35
LMO1-203ENST00000524379 C1orf115Q9H7X2 142 aa23.46■■□□□ 1.35
LMO1-203ENST00000524379 IRX6P78412 446 aaPredicted RBP23.45■■□□□ 1.34
LMO1-203ENST00000524379 LMBR1LQ6UX01 489 aa23.45■■□□□ 1.34
LMO1-203ENST00000524379 GREM2Q9H772 168 aa23.45■■□□□ 1.34
LMO1-203ENST00000524379 ZBTB40Q9NUA8 1239 aa23.45■■□□□ 1.34
LMO1-203ENST00000524379 WWC3Q9ULE0 1092 aa23.45■■□□□ 1.34
LMO1-203ENST00000524379 DDX19BQ9UMR2 479 aa23.45■■□□□ 1.34
LMO1-203ENST00000524379 TAF1P21675 1872 aa23.45■■□□□ 1.34
LMO1-203ENST00000524379 H0YIN7 160 aa23.44■■□□□ 1.34
LMO1-203ENST00000524379 FAM161AQ3B820 660 aa23.44■■□□□ 1.34
LMO1-203ENST00000524379 SEC31BQ9NQW1 1179 aa23.44■■□□□ 1.34
LMO1-203ENST00000524379 RTL9Q8NET4 1388 aa23.43■■□□□ 1.34
LMO1-203ENST00000524379 MASTLQ96GX5 879 aa23.43■■□□□ 1.34
LMO1-203ENST00000524379 GNAI2P04899 355 aa23.42■■□□□ 1.34
LMO1-203ENST00000524379 NPR1P16066 1061 aa23.42■■□□□ 1.34
LMO1-203ENST00000524379 STYK1Q6J9G0 422 aa23.42■■□□□ 1.34
LMO1-203ENST00000524379 PDZRN3Q9UPQ7 1066 aa23.42■■□□□ 1.34
LMO1-203ENST00000524379 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
LMO1-203ENST00000524379 CCDC152Q4G0S7 254 aa23.41■■□□□ 1.34
LMO1-203ENST00000524379 RPGRQ92834 1020 aaKnown RBP23.41■■□□□ 1.34
LMO1-203ENST00000524379 CELF1Q92879 486 aaKnown RBP23.41■■□□□ 1.34
LMO1-203ENST00000524379 ZNF622Q969S3 477 aaKnown RBP eCLIP23.41■■□□□ 1.34
LMO1-203ENST00000524379 SLX4Q8IY92 1834 aa23.4■■□□□ 1.34
LMO1-203ENST00000524379 EXOC6Q8TAG9 804 aa23.4■■□□□ 1.34
LMO1-203ENST00000524379 CRAMP1Q96RY5 1269 aa23.4■■□□□ 1.34
LMO1-203ENST00000524379 RFX5P48382 616 aaPredicted RBP23.39■■□□□ 1.33
LMO1-203ENST00000524379 ITGA6P23229 1130 aa23.38■■□□□ 1.33
LMO1-203ENST00000524379 MTX1Q13505 466 aa23.38■■□□□ 1.33
LMO1-203ENST00000524379 RBM17Q96I25 401 aaKnown RBP23.38■■□□□ 1.33
LMO1-203ENST00000524379 CACNA1SQ13698 1873 aa23.38■■□□□ 1.33
LMO1-203ENST00000524379 GRAPQ13588 217 aa23.37■■□□□ 1.33
LMO1-203ENST00000524379 PRPF40BQ6NWY9 871 aaKnown RBP23.37■■□□□ 1.33
LMO1-203ENST00000524379 OLFM4Q6UX06 510 aa23.37■■□□□ 1.33
LMO1-203ENST00000524379 DDX46Q7L014 1031 aaKnown RBP23.37■■□□□ 1.33
LMO1-203ENST00000524379 GRAPLQ8TC17 118 aaPredicted RBP23.37■■□□□ 1.33
LMO1-203ENST00000524379 PIM2Q9P1W9 311 aa23.37■■□□□ 1.33
LMO1-203ENST00000524379 CHMP3Q9Y3E7 222 aa23.37■■□□□ 1.33
LMO1-203ENST00000524379 PNMA6EA0A0J9YXQ4 647 aa23.36■■□□□ 1.33
LMO1-203ENST00000524379 CEP85Q6P2H3 762 aa23.36■■□□□ 1.33
LMO1-203ENST00000524379 SIRT2Q8IXJ6 389 aa23.36■■□□□ 1.33
LMO1-203ENST00000524379 C7orf43Q8WVR3 580 aa23.36■■□□□ 1.33
LMO1-203ENST00000524379 CNKSR1Q969H4 720 aa23.36■■□□□ 1.33
LMO1-203ENST00000524379 ZNF594Q96JF6 807 aaPredicted RBP23.36■■□□□ 1.33
LMO1-203ENST00000524379 TTLL6Q8N841 843 aa23.35■■□□□ 1.33
LMO1-203ENST00000524379 KLHDC4Q8TBB5 520 aa23.35■■□□□ 1.33
LMO1-203ENST00000524379 GPBP1L1Q9HC44 474 aaPredicted RBP23.35■■□□□ 1.33
LMO1-203ENST00000524379 SNED1Q8TER0 1413 aa23.34■■□□□ 1.33
LMO1-203ENST00000524379 HDAC5Q9UQL6 1122 aa23.34■■□□□ 1.33
LMO1-203ENST00000524379 PCDHB15Q9Y5E8 787 aa23.34■■□□□ 1.33
LMO1-203ENST00000524379 LRRC37AA6NMS7 1700 aa23.33■■□□□ 1.33
LMO1-203ENST00000524379 SPEF2Q9C093 1822 aa23.33■■□□□ 1.33
LMO1-203ENST00000524379 ALDH1B1P30837 517 aa23.33■■□□□ 1.33
LMO1-203ENST00000524379 RPS8P62241 208 aaKnown RBP23.33■■□□□ 1.33
LMO1-203ENST00000524379 ATP8B2P98198 1209 aa23.33■■□□□ 1.33
LMO1-203ENST00000524379 IFIT5Q13325 482 aaKnown RBP23.33■■□□□ 1.33
LMO1-203ENST00000524379 DALRD3Q5D0E6 543 aaKnown RBP23.33■■□□□ 1.33
LMO1-203ENST00000524379 BCS1LQ9Y276 419 aa23.33■■□□□ 1.33
LMO1-203ENST00000524379 ANKRD18BA2A2Z9 1011 aa23.32■■□□□ 1.32
LMO1-203ENST00000524379 PPEF1O14829 653 aaPredicted RBP23.32■■□□□ 1.32
LMO1-203ENST00000524379 SRGAP3O43295 1099 aa23.32■■□□□ 1.32
LMO1-203ENST00000524379 POLA2Q14181 598 aa23.32■■□□□ 1.32
LMO1-203ENST00000524379 ZNF526Q8TF50 670 aaPredicted RBP23.32■■□□□ 1.32
LMO1-203ENST00000524379 PTPN12Q05209 780 aaKnown RBP23.31■■□□□ 1.32
LMO1-203ENST00000524379 SSH3Q8TE77 659 aa23.31■■□□□ 1.32
LMO1-203ENST00000524379 PUS3Q9BZE2 481 aaKnown RBP23.31■■□□□ 1.32
LMO1-203ENST00000524379 ZNF219Q9P2Y4 722 aaPredicted RBP23.31■■□□□ 1.32
LMO1-203ENST00000524379 PA2G4Q9UQ80 394 aaKnown RBP23.31■■□□□ 1.32
LMO1-203ENST00000524379 BBOX1O75936 387 aa23.3■■□□□ 1.32
LMO1-203ENST00000524379 CCDC57Q2TAC2 916 aa23.3■■□□□ 1.32
LMO1-203ENST00000524379 ANKRD18AQ8IVF6 992 aa23.3■■□□□ 1.32
LMO1-203ENST00000524379 CDC5LQ99459 802 aaKnown RBP23.3■■□□□ 1.32
LMO1-203ENST00000524379 CHMP4BQ9H444 224 aaKnown RBP23.3■■□□□ 1.32
LMO1-203ENST00000524379 ARFGEF1Q9Y6D6 1849 aa23.3■■□□□ 1.32
LMO1-203ENST00000524379 C21orf2O43822 256 aa23.29■■□□□ 1.32
LMO1-203ENST00000524379 ATP6V0A2Q9Y487 856 aa23.29■■□□□ 1.32
LMO1-203ENST00000524379 LTBP1Q14766 1721 aa23.28■■□□□ 1.32
LMO1-203ENST00000524379 ARHGAP27Q6ZUM4 889 aa23.28■■□□□ 1.32
LMO1-203ENST00000524379 COPRSQ9NQ92 184 aa23.28■■□□□ 1.32
LMO1-203ENST00000524379 LRRC24Q50LG9 513 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms