RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 BBOX1O75936 387 aa15.2■□□□□ 0.02
CLN8-207ENST00000524258 CSF1RP07333 972 aa15.2■□□□□ 0.02
CLN8-207ENST00000524258 CCDC93Q567U6 631 aa15.2■□□□□ 0.02
CLN8-207ENST00000524258 SOGA3Q5TF21 947 aa15.2■□□□□ 0.02
CLN8-207ENST00000524258 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
CLN8-207ENST00000524258 KAZALD1Q96I82 304 aa15.2■□□□□ 0.02
CLN8-207ENST00000524258 SEC31BQ9NQW1 1179 aa15.2■□□□□ 0.02
CLN8-207ENST00000524258 ATP6V0A2Q9Y487 856 aa15.2■□□□□ 0.02
CLN8-207ENST00000524258 SBF1O95248 1867 aa15.2■□□□□ 0.02
CLN8-207ENST00000524258 PPEF1O14829 653 aaPredicted RBP15.19■□□□□ 0.02
CLN8-207ENST00000524258 CTSWP56202 376 aa15.19■□□□□ 0.02
CLN8-207ENST00000524258 FOXO4P98177 505 aa15.19■□□□□ 0.02
CLN8-207ENST00000524258 EPHA10Q5JZY3 1008 aa15.19■□□□□ 0.02
CLN8-207ENST00000524258 CC2D2BQ6DHV5 1058 aa15.19■□□□□ 0.02
CLN8-207ENST00000524258 DDX46Q7L014 1031 aaKnown RBP15.19■□□□□ 0.02
CLN8-207ENST00000524258 SP8Q8IXZ3 490 aa15.19■□□□□ 0.02
CLN8-207ENST00000524258 SRCIN1Q9C0H9 1055 aa15.19■□□□□ 0.02
CLN8-207ENST00000524258 RTL9Q8NET4 1388 aa15.19■□□□□ 0.02
CLN8-207ENST00000524258 TAF1P21675 1872 aa15.18■□□□□ 0.02
CLN8-207ENST00000524258 GRM8O00222 908 aa15.18■□□□□ 0.02
CLN8-207ENST00000524258 LMNB1P20700 586 aa15.18■□□□□ 0.02
CLN8-207ENST00000524258 FKBP4Q02790 459 aaKnown RBP eCLIP15.18■□□□□ 0.02
CLN8-207ENST00000524258 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
CLN8-207ENST00000524258 RTKN2Q8IZC4 609 aa15.18■□□□□ 0.02
CLN8-207ENST00000524258 ARHGAP45Q92619 1136 aa15.18■□□□□ 0.02
CLN8-207ENST00000524258 PSMD1Q99460 953 aa15.18■□□□□ 0.02
CLN8-207ENST00000524258 TNNQ9UQP3 1299 aa15.18■□□□□ 0.02
CLN8-207ENST00000524258 CACNA1SQ13698 1873 aa15.17■□□□□ 0.02
CLN8-207ENST00000524258 HSP90B1P14625 803 aaKnown RBP15.17■□□□□ 0.02
CLN8-207ENST00000524258 RPS8P62241 208 aaKnown RBP15.17■□□□□ 0.02
CLN8-207ENST00000524258 RTFDC1Q9BY42 306 aaPredicted RBP15.17■□□□□ 0.02
CLN8-207ENST00000524258 USP44Q9H0E7 712 aa15.17■□□□□ 0.02
CLN8-207ENST00000524258 TAOK3Q9H2K8 898 aa15.17■□□□□ 0.02
CLN8-207ENST00000524258 RNF181Q9P0P0 153 aa15.17■□□□□ 0.02
CLN8-207ENST00000524258 NBPF7P0C2Y1 421 aaPredicted RBP15.16■□□□□ 0.02
CLN8-207ENST00000524258 CCDC152Q4G0S7 254 aa15.16■□□□□ 0.02
CLN8-207ENST00000524258 CCDC85AQ96PX6 553 aaPredicted RBP15.16■□□□□ 0.02
CLN8-207ENST00000524258 GREM2Q9H772 168 aa15.16■□□□□ 0.02
CLN8-207ENST00000524258 GRIPAP1Q4V328 841 aa15.15■□□□□ 0.02
CLN8-207ENST00000524258 TMC4Q7Z404 712 aa15.15■□□□□ 0.02
CLN8-207ENST00000524258 SUCLG2Q96I99 432 aa15.15■□□□□ 0.02
CLN8-207ENST00000524258 API5Q9BZZ5 524 aaKnown RBP15.15■□□□□ 0.02
CLN8-207ENST00000524258 ZNF277Q9NRM2 450 aaPredicted RBP15.15■□□□□ 0.02
CLN8-207ENST00000524258 COL4A5P29400 1685 aa15.15■□□□□ 0.02
CLN8-207ENST00000524258 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
CLN8-207ENST00000524258 TRIM27P14373 513 aa15.14■□□□□ 0.01
CLN8-207ENST00000524258 DUOX1Q9NRD9 1551 aa15.14■□□□□ 0.01
CLN8-207ENST00000524258 LRRC37AA6NMS7 1700 aa15.14■□□□□ 0.01
CLN8-207ENST00000524258 ZC3H4Q9UPT8 1303 aaKnown RBP15.14■□□□□ 0.01
CLN8-207ENST00000524258 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
CLN8-207ENST00000524258 INTS3Q68E01 1043 aaKnown RBP15.13■□□□□ 0.01
CLN8-207ENST00000524258 ANKRD44Q8N8A2 993 aa15.13■□□□□ 0.01
CLN8-207ENST00000524258 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
CLN8-207ENST00000524258 IARSP41252 1262 aaKnown RBP15.12■□□□□ 0.01
CLN8-207ENST00000524258 GPSM2P81274 684 aa15.12■□□□□ 0.01
CLN8-207ENST00000524258 RABL6Q3YEC7 729 aaPredicted RBP15.12■□□□□ 0.01
CLN8-207ENST00000524258 LMBR1LQ6UX01 489 aa15.12■□□□□ 0.01
CLN8-207ENST00000524258 ATF7IPQ6VMQ6 1270 aa15.12■□□□□ 0.01
CLN8-207ENST00000524258 PODXL2Q9NZ53 605 aa15.12■□□□□ 0.01
CLN8-207ENST00000524258 LTBP1Q14766 1721 aa15.12■□□□□ 0.01
CLN8-207ENST00000524258 ITGA6P23229 1130 aa15.11■□□□□ 0.01
CLN8-207ENST00000524258 CCT4P50991 539 aaKnown RBP15.11■□□□□ 0.01
CLN8-207ENST00000524258 MPNDQ8N594 471 aa15.11■□□□□ 0.01
CLN8-207ENST00000524258 BSDC1Q9NW68 430 aaPredicted RBP15.11■□□□□ 0.01
CLN8-207ENST00000524258 POLLQ9UGP5 575 aa15.11■□□□□ 0.01
CLN8-207ENST00000524258 CCDC88AQ3V6T2 1871 aa15.1■□□□□ 0.01
CLN8-207ENST00000524258 MYH3P11055 1940 aa15.1■□□□□ 0.01
CLN8-207ENST00000524258 DICER1Q9UPY3 1922 aaKnown RBP15.1■□□□□ 0.01
CLN8-207ENST00000524258 WTIPA6NIX2 430 aaPredicted RBP15.1■□□□□ 0.01
CLN8-207ENST00000524258 FZD9O00144 591 aa15.1■□□□□ 0.01
CLN8-207ENST00000524258 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
CLN8-207ENST00000524258 CDC5LQ99459 802 aaKnown RBP15.1■□□□□ 0.01
CLN8-207ENST00000524258 VPS33BQ9H267 617 aa15.1■□□□□ 0.01
CLN8-207ENST00000524258 MINPP1Q9UNW1 487 aa15.1■□□□□ 0.01
CLN8-207ENST00000524258 GLTPD2A6NH11 291 aa15.09■□□□□ 0.01
CLN8-207ENST00000524258 POTECB2RU33 542 aa15.09■□□□□ 0.01
CLN8-207ENST00000524258 IPO8O15397 1037 aaKnown RBP15.09■□□□□ 0.01
CLN8-207ENST00000524258 RLBP1P12271 317 aa15.09■□□□□ 0.01
CLN8-207ENST00000524258 DPP8Q6V1X1 898 aaPredicted RBP15.09■□□□□ 0.01
CLN8-207ENST00000524258 BICC1Q9H694 974 aaKnown RBP15.09■□□□□ 0.01
CLN8-207ENST00000524258 KIF3CO14782 793 aa15.08■□□□□ 0
CLN8-207ENST00000524258 KIAA2012Q0VF49 1180 aa15.08■□□□□ 0
CLN8-207ENST00000524258 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0
CLN8-207ENST00000524258 TBC1D16Q8TBP0 767 aa15.08■□□□□ 0
CLN8-207ENST00000524258 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0
CLN8-207ENST00000524258 MEIS3Q99687 375 aa15.08■□□□□ 0
CLN8-207ENST00000524258 AOC3Q16853 763 aa15.07■□□□□ 0
CLN8-207ENST00000524258 CLUAP1Q96AJ1 413 aa15.07■□□□□ 0
CLN8-207ENST00000524258 NMRK2Q9NPI5 230 aa15.07■□□□□ 0
CLN8-207ENST00000524258 NSFL1CQ9UNZ2 370 aaKnown RBP15.07■□□□□ 0
CLN8-207ENST00000524258 ZNF541Q9H0D2 1346 aa15.07■□□□□ 0
CLN8-207ENST00000524258 ANKRD18BA2A2Z9 1011 aa15.06■□□□□ 0
CLN8-207ENST00000524258 RFX5P48382 616 aaPredicted RBP15.06■□□□□ 0
CLN8-207ENST00000524258 IFIT5Q13325 482 aaKnown RBP15.06■□□□□ 0
CLN8-207ENST00000524258 TMEM57Q8N5G2 664 aa15.06■□□□□ 0
CLN8-207ENST00000524258 SUPT20HQ8NEM7 779 aa15.06■□□□□ 0
CLN8-207ENST00000524258 ZNF526Q8TF50 670 aaPredicted RBP15.06■□□□□ 0
CLN8-207ENST00000524258 ZNF594Q96JF6 807 aaPredicted RBP15.06■□□□□ 0
CLN8-207ENST00000524258 GPR101Q96P66 508 aaPredicted RBP15.06■□□□□ 0
CLN8-207ENST00000524258 TIAM2Q8IVF5 1701 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms