RNA–Protein interactions for RNA: ENST00000523908.5

CLINT1-207, Transcript of clathrin interactor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLINT1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-207ENST00000523908 FOXD4L6Q3SYB3 417 aaPredicted RBP23.27■■□□□ 1.32
CLINT1-207ENST00000523908 FOXD4L3Q6VB84 417 aaPredicted RBP23.27■■□□□ 1.32
CLINT1-207ENST00000523908 PLBD2Q8NHP8 589 aa23.27■■□□□ 1.32
CLINT1-207ENST00000523908 CYP27B1O15528 508 aa23.27■■□□□ 1.32
CLINT1-207ENST00000523908 LARP6Q9BRS8 491 aaKnown RBP23.27■■□□□ 1.32
CLINT1-207ENST00000523908 DBNLQ9UJU6 430 aaKnown RBP23.27■■□□□ 1.32
CLINT1-207ENST00000523908 PAPPAQ13219 1627 aa23.26■■□□□ 1.31
CLINT1-207ENST00000523908 FIBPO43427 364 aa23.26■■□□□ 1.31
CLINT1-207ENST00000523908 FUCA2Q9BTY2 467 aa23.26■■□□□ 1.31
CLINT1-207ENST00000523908 USP16Q9Y5T5 823 aa23.26■■□□□ 1.31
CLINT1-207ENST00000523908 HAUS7Q99871 368 aa23.25■■□□□ 1.31
CLINT1-207ENST00000523908 U3KPZ7 1027 aaPredicted RBP23.25■■□□□ 1.31
CLINT1-207ENST00000523908 STRCP1A6NGW2 1772 aa23.24■■□□□ 1.31
CLINT1-207ENST00000523908 DNM1Q05193 864 aaKnown RBP23.24■■□□□ 1.31
CLINT1-207ENST00000523908 KLHDC4Q8TBB5 520 aa23.24■■□□□ 1.31
CLINT1-207ENST00000523908 GPR108Q9NPR9 543 aa23.24■■□□□ 1.31
CLINT1-207ENST00000523908 SPEF2Q9C093 1822 aa23.24■■□□□ 1.31
CLINT1-207ENST00000523908 CSB-PGBD3P0DP91 1061 aa23.24■■□□□ 1.31
CLINT1-207ENST00000523908 KRT85P78386 507 aa23.24■■□□□ 1.31
CLINT1-207ENST00000523908 TOB2Q14106 344 aaPredicted RBP23.24■■□□□ 1.31
CLINT1-207ENST00000523908 ZNF589Q86UQ0 364 aaPredicted RBP23.24■■□□□ 1.31
CLINT1-207ENST00000523908 PALLDQ8WX93 1383 aa23.23■■□□□ 1.31
CLINT1-207ENST00000523908 TJP1Q07157 1748 aa23.23■■□□□ 1.31
CLINT1-207ENST00000523908 LARP1BQ659C4 914 aaKnown RBP23.23■■□□□ 1.31
CLINT1-207ENST00000523908 TFCP2Q12800 502 aa23.22■■□□□ 1.31
CLINT1-207ENST00000523908 VPS37CA5D8V6 355 aaPredicted RBP23.22■■□□□ 1.31
CLINT1-207ENST00000523908 CABP4P57796 275 aa23.22■■□□□ 1.31
CLINT1-207ENST00000523908 UBE3BQ7Z3V4 1068 aa23.22■■□□□ 1.31
CLINT1-207ENST00000523908 NECAB1Q8N987 351 aa23.22■■□□□ 1.31
CLINT1-207ENST00000523908 SPATA31A3Q5VYP0 1347 aa23.22■■□□□ 1.31
CLINT1-207ENST00000523908 SH3TC1Q8TE82 1336 aa23.22■■□□□ 1.31
CLINT1-207ENST00000523908 ZNF609O15014 1411 aa23.22■■□□□ 1.31
CLINT1-207ENST00000523908 RRP9O43818 475 aaKnown RBP23.21■■□□□ 1.31
CLINT1-207ENST00000523908 CADPS2Q86UW7 1296 aa23.21■■□□□ 1.31
CLINT1-207ENST00000523908 A0A087WZG4 1122 aa23.2■■□□□ 1.3
CLINT1-207ENST00000523908 H7C1W4 665 aa23.2■■□□□ 1.3
CLINT1-207ENST00000523908 SCAND2PQ9GZW5 306 aaPredicted RBP23.2■■□□□ 1.3
CLINT1-207ENST00000523908 MCMDC2Q4G0Z9 681 aa23.19■■□□□ 1.3
CLINT1-207ENST00000523908 KCPQ6ZWJ8 1503 aa23.18■■□□□ 1.3
CLINT1-207ENST00000523908 PTMAP06454 111 aaKnown RBP23.18■■□□□ 1.3
CLINT1-207ENST00000523908 KBTBD3Q8NAB2 608 aa23.18■■□□□ 1.3
CLINT1-207ENST00000523908 GTF3C6Q969F1 213 aa23.18■■□□□ 1.3
CLINT1-207ENST00000523908 NEK1Q96PY6 1258 aa23.18■■□□□ 1.3
CLINT1-207ENST00000523908 CDC37L1Q7L3B6 337 aa23.17■■□□□ 1.3
CLINT1-207ENST00000523908 PCDH11XQ9BZA7 1347 aa23.17■■□□□ 1.3
CLINT1-207ENST00000523908 PCDH11YQ9BZA8 1340 aa23.17■■□□□ 1.3
CLINT1-207ENST00000523908 HMGB1P09429 215 aaKnown RBP23.17■■□□□ 1.3
CLINT1-207ENST00000523908 FOXO4P98177 505 aa23.17■■□□□ 1.3
CLINT1-207ENST00000523908 KDM4AO75164 1064 aa23.16■■□□□ 1.3
CLINT1-207ENST00000523908 HCLS1P14317 486 aaPredicted RBP23.16■■□□□ 1.3
CLINT1-207ENST00000523908 TTC6Q86TZ1 520 aa23.16■■□□□ 1.3
CLINT1-207ENST00000523908 DBNDD2Q9BQY9 259 aa23.16■■□□□ 1.3
CLINT1-207ENST00000523908 ATG3Q9NT62 314 aa23.16■■□□□ 1.3
CLINT1-207ENST00000523908 TAF6LQ9Y6J9 622 aa23.16■■□□□ 1.3
CLINT1-207ENST00000523908 ERVV-2B6SEH9 535 aa23.16■■□□□ 1.3
CLINT1-207ENST00000523908 KIAA2012Q0VF49 1180 aa23.16■■□□□ 1.3
CLINT1-207ENST00000523908 HELLSQ9NRZ9 838 aa23.16■■□□□ 1.3
CLINT1-207ENST00000523908 TNS2Q63HR2 1409 aa23.15■■□□□ 1.3
CLINT1-207ENST00000523908 DDX54Q8TDD1 881 aaKnown RBP23.15■■□□□ 1.3
CLINT1-207ENST00000523908 LLPHQ9BRT6 129 aaKnown RBP23.15■■□□□ 1.3
CLINT1-207ENST00000523908 CCDC192P0DO97 292 aa23.15■■□□□ 1.3
CLINT1-207ENST00000523908 EDC3Q96F86 508 aaKnown RBP23.15■■□□□ 1.3
CLINT1-207ENST00000523908 CWC25Q9NXE8 425 aaPredicted RBP23.15■■□□□ 1.3
CLINT1-207ENST00000523908 USP25Q9UHP3 1055 aa23.15■■□□□ 1.3
CLINT1-207ENST00000523908 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.15■■□□□ 1.35e-11■■■■□ 20.5
CLINT1-207ENST00000523908 IL15P40933 162 aaPredicted RBP23.14■■□□□ 1.3
CLINT1-207ENST00000523908 LMBR1LQ6UX01 489 aa23.14■■□□□ 1.3
CLINT1-207ENST00000523908 DSCC1Q9BVC3 393 aa23.14■■□□□ 1.3
CLINT1-207ENST00000523908 ADCY5O95622 1261 aa23.14■■□□□ 1.29
CLINT1-207ENST00000523908 COL9A3Q14050 684 aaPredicted RBP23.14■■□□□ 1.29
CLINT1-207ENST00000523908 NKX1-1Q15270 411 aaPredicted RBP23.14■■□□□ 1.29
CLINT1-207ENST00000523908 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.14■■□□□ 1.29
CLINT1-207ENST00000523908 ATP5J2-PTCD1G3V325 749 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 PTCD1O75127 700 aaKnown RBP23.13■■□□□ 1.29
CLINT1-207ENST00000523908 CIAO1O76071 339 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 ATG9AQ7Z3C6 839 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 NBPF26B4DH59 902 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 NBPF14Q5TI25 921 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 NBPF10Q6P3W6 841 aaKnown RBP23.13■■□□□ 1.29
CLINT1-207ENST00000523908 GIMAP6Q6P9H5 292 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 NBPF15Q8N660 670 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 CCDC191Q8NCU4 936 aa23.13■■□□□ 1.29
CLINT1-207ENST00000523908 DDX19AQ9NUU7 478 aaKnown RBP23.13■■□□□ 1.29
CLINT1-207ENST00000523908 TPM3P06753 285 aa23.12■■□□□ 1.29
CLINT1-207ENST00000523908 RBM43Q6ZSC3 357 aaKnown RBP23.12■■□□□ 1.29
CLINT1-207ENST00000523908 LAMA4Q16363 1823 aa23.12■■□□□ 1.29
CLINT1-207ENST00000523908 CYP21A2P08686 494 aa23.11■■□□□ 1.29
CLINT1-207ENST00000523908 DNAJC2Q99543 621 aaKnown RBP23.11■■□□□ 1.29
CLINT1-207ENST00000523908 NUP62CLQ9H1M0 184 aa23.11■■□□□ 1.29
CLINT1-207ENST00000523908 ZSCAN16Q9H4T2 348 aaPredicted RBP23.11■■□□□ 1.29
CLINT1-207ENST00000523908 SHANK3Q9BYB0 1731 aa23.11■■□□□ 1.29
CLINT1-207ENST00000523908 MAP3K11Q16584 847 aa23.11■■□□□ 1.29
CLINT1-207ENST00000523908 SMARCC2Q8TAQ2 1214 aa23.11■■□□□ 1.29
CLINT1-207ENST00000523908 CABLES1Q8TDN4 633 aa23.11■■□□□ 1.29
CLINT1-207ENST00000523908 DDX17Q92841 729 aaKnown RBP23.11■■□□□ 1.29
CLINT1-207ENST00000523908 CHMP4CQ96CF2 233 aa23.11■■□□□ 1.29
CLINT1-207ENST00000523908 FBXO3Q9UK99 471 aa23.11■■□□□ 1.29
CLINT1-207ENST00000523908 TCEANC2Q96MN5 208 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms