RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 ARHGEF15O94989 841 aa10.08□□□□□ -0.8
CPNE3-207ENST00000523588 MAP3K6O95382 1288 aa10.08□□□□□ -0.8
CPNE3-207ENST00000523588 AAMPQ13685 434 aa10.08□□□□□ -0.8
CPNE3-207ENST00000523588 GALNT6Q8NCL4 622 aa10.08□□□□□ -0.8
CPNE3-207ENST00000523588 TNFRSF25Q93038 417 aa10.08□□□□□ -0.8
CPNE3-207ENST00000523588 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
CPNE3-207ENST00000523588 ADARB2-AS1A8MUL3 147 aa10.07□□□□□ -0.8
CPNE3-207ENST00000523588 SHISA8B8ZZ34 492 aa10.07□□□□□ -0.8
CPNE3-207ENST00000523588 SVOPQ8N4V2 548 aa10.07□□□□□ -0.8
CPNE3-207ENST00000523588 EDARADDQ8WWZ3 215 aa10.07□□□□□ -0.8
CPNE3-207ENST00000523588 FNDC3AQ9Y2H6 1198 aaKnown RBP10.07□□□□□ -0.8
CPNE3-207ENST00000523588 RARAP10276 462 aa10.06□□□□□ -0.8
CPNE3-207ENST00000523588 NLRP13Q86W25 1043 aa10.06□□□□□ -0.8
CPNE3-207ENST00000523588 A6NHS1 94 aa10.05□□□□□ -0.8
CPNE3-207ENST00000523588 RPLP1P05386 114 aaKnown RBP10.05□□□□□ -0.8
CPNE3-207ENST00000523588 XKR5Q6UX68 686 aa10.05□□□□□ -0.8
CPNE3-207ENST00000523588 GJD3Q8N144 294 aa10.05□□□□□ -0.8
CPNE3-207ENST00000523588 ELOA3CA0A087WX78 387 aaPredicted RBP10.04□□□□□ -0.8
CPNE3-207ENST00000523588 ELOA3DA6NLF2 546 aaPredicted RBP10.04□□□□□ -0.8
CPNE3-207ENST00000523588 MMP20O60882 483 aa10.04□□□□□ -0.8
CPNE3-207ENST00000523588 PCSK2P16519 638 aa10.04□□□□□ -0.8
CPNE3-207ENST00000523588 MAP3K10Q02779 954 aa10.04□□□□□ -0.8
CPNE3-207ENST00000523588 ELOA3BQ3SY89 546 aa10.04□□□□□ -0.8
CPNE3-207ENST00000523588 PDE12Q6L8Q7 609 aaKnown RBP10.04□□□□□ -0.8
CPNE3-207ENST00000523588 ELOA3Q8NG57 546 aa10.04□□□□□ -0.8
CPNE3-207ENST00000523588 ZBTB42B2RXF5 422 aa10.03□□□□□ -0.8
CPNE3-207ENST00000523588 USP5P45974 858 aa10.03□□□□□ -0.8
CPNE3-207ENST00000523588 C8orf34Q49A92 452 aa10.03□□□□□ -0.8
CPNE3-207ENST00000523588 DHX32Q7L7V1 743 aaKnown RBP10.03□□□□□ -0.8
CPNE3-207ENST00000523588 BTBD6Q96KE9 485 aa10.03□□□□□ -0.8
CPNE3-207ENST00000523588 ELP3Q9H9T3 547 aa10.03□□□□□ -0.8
CPNE3-207ENST00000523588 DNAJB12Q9NXW2 375 aaKnown RBP10.03□□□□□ -0.8
CPNE3-207ENST00000523588 TLR7Q9NYK1 1049 aaKnown RBP10.03□□□□□ -0.8
CPNE3-207ENST00000523588 BIN2Q9UBW5 565 aaPredicted RBP10.03□□□□□ -0.8
CPNE3-207ENST00000523588 BRPF3Q9ULD4 1205 aa10.03□□□□□ -0.8
CPNE3-207ENST00000523588 ADH7P40394 386 aa10.02□□□□□ -0.81
CPNE3-207ENST00000523588 TMEM63CQ9P1W3 806 aa10.02□□□□□ -0.81
CPNE3-207ENST00000523588 NDUFB5O43674 189 aa10.01□□□□□ -0.81
CPNE3-207ENST00000523588 HOXB4P17483 251 aaPredicted RBP10.01□□□□□ -0.81
CPNE3-207ENST00000523588 ZNF438Q7Z4V0 828 aa10.01□□□□□ -0.81
CPNE3-207ENST00000523588 TRPM4Q8TD43 1214 aa10.01□□□□□ -0.81
CPNE3-207ENST00000523588 UBE2OQ9C0C9 1292 aaKnown RBP10.01□□□□□ -0.81
CPNE3-207ENST00000523588 IGFLR1Q9H665 355 aa10.01□□□□□ -0.81
CPNE3-207ENST00000523588 IGHA2P01877 340 aa10□□□□□ -0.81
CPNE3-207ENST00000523588 HOXD8P13378 290 aaPredicted RBP10□□□□□ -0.81
CPNE3-207ENST00000523588 OR13H1Q8NG92 308 aa10□□□□□ -0.81
CPNE3-207ENST00000523588 CITED4Q96RK1 184 aa10□□□□□ -0.81
CPNE3-207ENST00000523588 FAM129BQ96TA1 746 aa10□□□□□ -0.81
CPNE3-207ENST00000523588 ENAMQ9NRM1 1142 aa10□□□□□ -0.81
CPNE3-207ENST00000523588 ABI2Q9NYB9 513 aaPredicted RBP10□□□□□ -0.81
CPNE3-207ENST00000523588 SLC6A14Q9UN76 642 aa10□□□□□ -0.81
CPNE3-207ENST00000523588 ADAMTS8Q9UP79 889 aa10□□□□□ -0.81
CPNE3-207ENST00000523588 STARD13Q9Y3M8 1113 aa10□□□□□ -0.81
CPNE3-207ENST00000523588 SOX18P35713 384 aa9.99□□□□□ -0.81
CPNE3-207ENST00000523588 NRLP54845 237 aa9.99□□□□□ -0.81
CPNE3-207ENST00000523588 GPLD1P80108 840 aa9.99□□□□□ -0.81
CPNE3-207ENST00000523588 EHHADHQ08426 723 aa9.99□□□□□ -0.81
CPNE3-207ENST00000523588 TBC1D8BQ0IIM8 1120 aa9.99□□□□□ -0.81
CPNE3-207ENST00000523588 CHSY3Q70JA7 882 aa9.99□□□□□ -0.81
CPNE3-207ENST00000523588 SND1Q7KZF4 910 aaKnown RBP eCLIP9.99□□□□□ -0.81
CPNE3-207ENST00000523588 RBCK1Q9BYM8 510 aa9.99□□□□□ -0.81
CPNE3-207ENST00000523588 CNTN3Q9P232 1028 aa9.99□□□□□ -0.81
CPNE3-207ENST00000523588 PSAPP07602 524 aa9.98□□□□□ -0.81
CPNE3-207ENST00000523588 ALAS2P22557 587 aa9.98□□□□□ -0.81
CPNE3-207ENST00000523588 TTC39BQ5VTQ0 682 aaPredicted RBP9.98□□□□□ -0.81
CPNE3-207ENST00000523588 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
CPNE3-207ENST00000523588 NEDD1Q8NHV4 660 aa9.98□□□□□ -0.81
CPNE3-207ENST00000523588 STK17AQ9UEE5 414 aa9.98□□□□□ -0.81
CPNE3-207ENST00000523588 DCTN4Q9UJW0 460 aa9.98□□□□□ -0.81
CPNE3-207ENST00000523588 NAGPAQ9UK23 515 aa9.98□□□□□ -0.81
CPNE3-207ENST00000523588 CYP2E1P05181 493 aaPredicted RBP9.97□□□□□ -0.81
CPNE3-207ENST00000523588 MLLT1Q03111 559 aaPredicted RBP9.97□□□□□ -0.81
CPNE3-207ENST00000523588 PLAURQ03405 335 aa9.97□□□□□ -0.81
CPNE3-207ENST00000523588 PCSK7Q16549 785 aa9.97□□□□□ -0.81
CPNE3-207ENST00000523588 CHRDQ9H2X0 955 aa9.97□□□□□ -0.81
CPNE3-207ENST00000523588 TNFRSF21O75509 655 aa9.96□□□□□ -0.82
CPNE3-207ENST00000523588 COL13A1Q5TAT6 717 aaPredicted RBP9.96□□□□□ -0.82
CPNE3-207ENST00000523588 C1orf127Q8N9H9 656 aa9.96□□□□□ -0.82
CPNE3-207ENST00000523588 AMPD1P23109 780 aa9.95□□□□□ -0.82
CPNE3-207ENST00000523588 PDE3BQ13370 1112 aa9.95□□□□□ -0.82
CPNE3-207ENST00000523588 C20orf204Q6ZNR8 217 aa9.95□□□□□ -0.82
CPNE3-207ENST00000523588 HFE2Q6ZVN8 426 aa9.95□□□□□ -0.82
CPNE3-207ENST00000523588 FAM35AQ86V20 835 aa9.95□□□□□ -0.82
CPNE3-207ENST00000523588 GZF1Q9H116 711 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-207ENST00000523588 FOXD3Q9UJU5 478 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-207ENST00000523588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.95□□□□□ -0.82
CPNE3-207ENST00000523588 LOC102724428A0A0B4J2F2 783 aa9.94□□□□□ -0.82
CPNE3-207ENST00000523588 GPR182O15218 404 aa9.94□□□□□ -0.82
CPNE3-207ENST00000523588 ALBP02768 609 aa9.94□□□□□ -0.82
CPNE3-207ENST00000523588 MAPK1P28482 360 aa9.94□□□□□ -0.82
CPNE3-207ENST00000523588 DGKGP49619 791 aa9.94□□□□□ -0.82
CPNE3-207ENST00000523588 SIK1P57059 783 aa9.94□□□□□ -0.82
CPNE3-207ENST00000523588 SNRPNP63162 240 aaKnown RBP9.94□□□□□ -0.82
CPNE3-207ENST00000523588 KANK3Q6NY19 840 aa9.94□□□□□ -0.82
CPNE3-207ENST00000523588 TMC7Q7Z402 723 aa9.94□□□□□ -0.82
CPNE3-207ENST00000523588 NSUN5Q96P11 429 aaKnown RBP9.94□□□□□ -0.82
CPNE3-207ENST00000523588 FAM181BA6NEQ2 426 aa9.93□□□□□ -0.82
CPNE3-207ENST00000523588 J3QW42 95 aa9.93□□□□□ -0.82
CPNE3-207ENST00000523588 KIF4AO95239 1232 aa9.93□□□□□ -0.82
CPNE3-207ENST00000523588 CPB1P15086 417 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms