RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 CXCL9Q07325 125 aa16.4■□□□□ 0.22
TOP1MT-217ENST00000523417 AOC3Q16853 763 aa16.4■□□□□ 0.22
TOP1MT-217ENST00000523417 SLC51AQ86UW1 340 aa16.4■□□□□ 0.22
TOP1MT-217ENST00000523417 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
TOP1MT-217ENST00000523417 ADAMTSL1Q8N6G6 1762 aa16.39■□□□□ 0.21
TOP1MT-217ENST00000523417 HSPA1AP0DMV8 641 aaKnown RBP16.39■□□□□ 0.21
TOP1MT-217ENST00000523417 HSPA1BP0DMV9 641 aaKnown RBP16.39■□□□□ 0.21
TOP1MT-217ENST00000523417 CCDC27Q2M243 656 aa16.39■□□□□ 0.21
TOP1MT-217ENST00000523417 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
TOP1MT-217ENST00000523417 FAM89AQ96GI7 184 aa16.39■□□□□ 0.21
TOP1MT-217ENST00000523417 PGAP2Q9UHJ9 254 aa16.39■□□□□ 0.21
TOP1MT-217ENST00000523417 RASSF10A6NK89 507 aa16.38■□□□□ 0.21
TOP1MT-217ENST00000523417 HSP90B1P14625 803 aaKnown RBP16.38■□□□□ 0.21
TOP1MT-217ENST00000523417 ZBTB38Q8NAP3 1195 aaPredicted RBP16.38■□□□□ 0.21
TOP1MT-217ENST00000523417 GPRC5DQ9NZD1 345 aa16.38■□□□□ 0.21
TOP1MT-217ENST00000523417 MKRN1Q9UHC7 482 aaKnown RBP16.38■□□□□ 0.21
TOP1MT-217ENST00000523417 CDHR2Q9BYE9 1310 aa16.38■□□□□ 0.21
TOP1MT-217ENST00000523417 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
TOP1MT-217ENST00000523417 TNIP1Q15025 636 aa16.37■□□□□ 0.21
TOP1MT-217ENST00000523417 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
TOP1MT-217ENST00000523417 ADARB2Q9NS39 739 aaKnown RBP16.37■□□□□ 0.21
TOP1MT-217ENST00000523417 VEGFBP49765 207 aa16.36■□□□□ 0.21
TOP1MT-217ENST00000523417 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
TOP1MT-217ENST00000523417 CIAPIN1Q6FI81 312 aa16.36■□□□□ 0.21
TOP1MT-217ENST00000523417 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
TOP1MT-217ENST00000523417 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
TOP1MT-217ENST00000523417 CCDC191Q8NCU4 936 aa16.36■□□□□ 0.21
TOP1MT-217ENST00000523417 ZC3H15Q8WU90 426 aaKnown RBP16.36■□□□□ 0.21
TOP1MT-217ENST00000523417 PHAXQ9H814 394 aaKnown RBP16.36■□□□□ 0.21
TOP1MT-217ENST00000523417 IRS4O14654 1257 aaPredicted RBP16.35■□□□□ 0.21
TOP1MT-217ENST00000523417 RPS8P62241 208 aaKnown RBP16.35■□□□□ 0.21
TOP1MT-217ENST00000523417 GOLGA2Q08379 1002 aa16.35■□□□□ 0.21
TOP1MT-217ENST00000523417 DEFB115Q30KQ5 88 aa16.35■□□□□ 0.21
TOP1MT-217ENST00000523417 CELF1Q92879 486 aaKnown RBP16.35■□□□□ 0.21
TOP1MT-217ENST00000523417 ANKRD36CQ5JPF3 1778 aa16.35■□□□□ 0.21
TOP1MT-217ENST00000523417 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
TOP1MT-217ENST00000523417 PCCAP05165 728 aaPredicted RBP16.34■□□□□ 0.21
TOP1MT-217ENST00000523417 DPF2Q92785 391 aa16.34■□□□□ 0.21
TOP1MT-217ENST00000523417 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
TOP1MT-217ENST00000523417 PODXL2Q9NZ53 605 aa16.34■□□□□ 0.21
TOP1MT-217ENST00000523417 DDX58O95786 925 aaKnown RBP16.33■□□□□ 0.2
TOP1MT-217ENST00000523417 GMPSP49915 693 aaPredicted RBP16.33■□□□□ 0.2
TOP1MT-217ENST00000523417 WASHC4Q2M389 1173 aa16.33■□□□□ 0.2
TOP1MT-217ENST00000523417 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
TOP1MT-217ENST00000523417 WBP1LQ9NX94 342 aa16.33■□□□□ 0.2
TOP1MT-217ENST00000523417 POLLQ9UGP5 575 aa16.33■□□□□ 0.2
TOP1MT-217ENST00000523417 NSFL1CQ9UNZ2 370 aaKnown RBP16.33■□□□□ 0.2
TOP1MT-217ENST00000523417 YDJCA8MPS7 323 aa16.32■□□□□ 0.2
TOP1MT-217ENST00000523417 IL16Q14005 1332 aa16.32■□□□□ 0.2
TOP1MT-217ENST00000523417 LTBP1Q14766 1721 aa16.32■□□□□ 0.2
TOP1MT-217ENST00000523417 CCDC184Q52MB2 194 aa16.32■□□□□ 0.2
TOP1MT-217ENST00000523417 CST9Q5W186 159 aa16.32■□□□□ 0.2
TOP1MT-217ENST00000523417 WWC1Q8IX03 1113 aa16.32■□□□□ 0.2
TOP1MT-217ENST00000523417 PDE8AO60658 829 aa16.31■□□□□ 0.2
TOP1MT-217ENST00000523417 GPSM2P81274 684 aa16.31■□□□□ 0.2
TOP1MT-217ENST00000523417 KSR2Q6VAB6 950 aa16.31■□□□□ 0.2
TOP1MT-217ENST00000523417 TNS4Q8IZW8 715 aa16.31■□□□□ 0.2
TOP1MT-217ENST00000523417 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
TOP1MT-217ENST00000523417 EYA3Q99504 573 aa16.31■□□□□ 0.2
TOP1MT-217ENST00000523417 MYD88Q99836 296 aa16.31■□□□□ 0.2
TOP1MT-217ENST00000523417 PRDM10Q9NQV6 1147 aa16.31■□□□□ 0.2
TOP1MT-217ENST00000523417 CWC25Q9NXE8 425 aaPredicted RBP16.31■□□□□ 0.2
TOP1MT-217ENST00000523417 PCNTO95613 3336 aa16.3■□□□□ 0.2
TOP1MT-217ENST00000523417 RAD17O75943 681 aa16.3■□□□□ 0.2
TOP1MT-217ENST00000523417 ZEB1P37275 1124 aaPredicted RBP16.3■□□□□ 0.2
TOP1MT-217ENST00000523417 HIRAP54198 1017 aaPredicted RBP16.3■□□□□ 0.2
TOP1MT-217ENST00000523417 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
TOP1MT-217ENST00000523417 WDR33Q9C0J8 1336 aaKnown RBP16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 H7C1D1 291 aa16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 FOXN1O15353 648 aa16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 RPS12P25398 132 aaKnown RBP16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 CCDC152Q4G0S7 254 aa16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 TBC1D16Q8TBP0 767 aa16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 ZNF428Q96B54 188 aa16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 HHIPL1Q96JK4 782 aa16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 TLL2Q9Y6L7 1015 aa16.29■□□□□ 0.2
TOP1MT-217ENST00000523417 LAMB2P55268 1798 aa16.28■□□□□ 0.2
TOP1MT-217ENST00000523417 C6orf229H3BNL8 230 aa16.28■□□□□ 0.2
TOP1MT-217ENST00000523417 CTCFP49711 727 aaPredicted RBP16.28■□□□□ 0.2
TOP1MT-217ENST00000523417 MAP2K1Q02750 393 aaPredicted RBP16.28■□□□□ 0.2
TOP1MT-217ENST00000523417 CDC37L1Q7L3B6 337 aa16.28■□□□□ 0.2
TOP1MT-217ENST00000523417 SEC31BQ9NQW1 1179 aa16.28■□□□□ 0.2
TOP1MT-217ENST00000523417 MAP3K2Q9Y2U5 619 aa16.28■□□□□ 0.2
TOP1MT-217ENST00000523417 DUOX1Q9NRD9 1551 aa16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 PI4KAP2A4QPH2 592 aa16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 PSMD14O00487 310 aa16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 IGKV5-2P06315 115 aa16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 VIL1P09327 827 aaKnown RBP16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 ECE1P42892 770 aa16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 FMR1Q06787 632 aaKnown RBP eCLIP16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 PI4KAP1Q8N8J0 262 aa16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 ZC3H12CQ9C0D7 883 aaKnown RBP16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.2
TOP1MT-217ENST00000523417 LRRC37AA6NMS7 1700 aa16.26■□□□□ 0.19
TOP1MT-217ENST00000523417 DDX60Q8IY21 1712 aaKnown RBP16.26■□□□□ 0.19
TOP1MT-217ENST00000523417 TRAF5O00463 557 aa16.26■□□□□ 0.19
TOP1MT-217ENST00000523417 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
TOP1MT-217ENST00000523417 STK31Q9BXU1 1019 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms