RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 PHKG2P15735 406 aa15.3■□□□□ 0.04
PCDHGB1-201ENST00000523390 NCOA7Q8NI08 942 aa15.3■□□□□ 0.04
PCDHGB1-201ENST00000523390 IGSF1Q8N6C5 1336 aa15.3■□□□□ 0.04
PCDHGB1-201ENST00000523390 ZNF594Q96JF6 807 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 PANK2Q9BZ23 570 aa15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 ORC3Q9UBD5 711 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 ABCA9Q8IUA7 1624 aa15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 CYP7A1P22680 504 aa15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 ZNF444Q8N0Y2 327 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 CRACR2BQ8N4Y2 399 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 TMOD2Q9NZR1 351 aa15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 HCLS1P14317 486 aaPredicted RBP15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 USP44Q9H0E7 712 aa15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 SPHKAPQ2M3C7 1700 aa15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 GCKRQ14397 625 aa15.29■□□□□ 0.04
PCDHGB1-201ENST00000523390 USP26Q9BXU7 913 aa15.28■□□□□ 0.04
PCDHGB1-201ENST00000523390 ZNF287Q9HBT7 754 aa15.28■□□□□ 0.04
PCDHGB1-201ENST00000523390 R3HCC1Q9Y3T6 440 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-201ENST00000523390 MFSD6Q6ZSS7 791 aa15.28■□□□□ 0.04
PCDHGB1-201ENST00000523390 SERPINC1P01008 464 aa15.28■□□□□ 0.04
PCDHGB1-201ENST00000523390 KRT18P05783 430 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-201ENST00000523390 FAM98CQ17RN3 349 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-201ENST00000523390 ZNF622Q969S3 477 aaKnown RBP eCLIP15.28■□□□□ 0.04
PCDHGB1-201ENST00000523390 RTCBQ9Y3I0 505 aaKnown RBP15.28■□□□□ 0.04
PCDHGB1-201ENST00000523390 KLF18A0A0U1RQI7 1052 aa15.27■□□□□ 0.04
PCDHGB1-201ENST00000523390 CEP57L1Q8IYX8 460 aa15.27■□□□□ 0.04
PCDHGB1-201ENST00000523390 SNX21Q969T3 373 aa15.27■□□□□ 0.04
PCDHGB1-201ENST00000523390 EYA2O00167 538 aa15.27■□□□□ 0.04
PCDHGB1-201ENST00000523390 CPA1P15085 419 aa15.27■□□□□ 0.03
PCDHGB1-201ENST00000523390 MCM5P33992 734 aa15.27■□□□□ 0.03
PCDHGB1-201ENST00000523390 IARSP41252 1262 aaKnown RBP15.27■□□□□ 0.03
PCDHGB1-201ENST00000523390 CCDC191Q8NCU4 936 aa15.27■□□□□ 0.03
PCDHGB1-201ENST00000523390 ZHX3Q9H4I2 956 aa15.27■□□□□ 0.03
PCDHGB1-201ENST00000523390 GNPATO15228 680 aa15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 SSBP05455 408 aaKnown RBP eCLIP15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 CKAP2LQ8IYA6 745 aa15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 A0A1B0GUL7 405 aa15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 TPTE2Q6XPS3 522 aa15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 CHST3Q7LGC8 479 aa15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 LDHCP07864 332 aa15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 ZGPATQ8N5A5 531 aaKnown RBP15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 TSPY2A6NKD2 308 aa15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 METAP2P50579 478 aaKnown RBP eCLIP15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 RBM27Q9P2N5 1060 aaKnown RBP15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 NDUFB9Q9Y6M9 179 aa15.26■□□□□ 0.03
PCDHGB1-201ENST00000523390 ST5P78524 1137 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 FILIP1LQ4L180 1135 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 CREB3L3Q68CJ9 461 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 Q6ZUG5 572 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 SLC4A4Q9Y6R1 1079 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 RTL1A6NKG5 1358 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 SH3TC1Q8TE82 1336 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 TTLL5Q6EMB2 1281 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 FILIP1Q7Z7B0 1213 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 CATIPQ7Z7H3 387 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 AK2P54819 239 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 SSRP1Q08945 709 aaKnown RBP15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 TNNI3KQ59H18 835 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 CCDC183Q5T5S1 534 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 FPGT-TNNI3KV9GXZ4 949 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 E9PCH4 1651 aa15.25■□□□□ 0.03
PCDHGB1-201ENST00000523390 RNF113AO15541 343 aaKnown RBP15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 CDCA7Q9BWT1 371 aaPredicted RBP15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 ITGA6P23229 1130 aa15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 CCAR1Q8IX12 1150 aaKnown RBP15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 BAG3O95817 575 aa15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 EPS15P42566 896 aa15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 PROSER3Q2NL68 480 aa15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 XRCC6P12956 609 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 NAA16Q6N069 864 aaPredicted RBP15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 MIGA1Q8NAN2 632 aa15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 SLC26A6Q9BXS9 759 aa15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 NSFL1CQ9UNZ2 370 aaKnown RBP15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 JAG2Q9Y219 1238 aa15.24■□□□□ 0.03
PCDHGB1-201ENST00000523390 OFD1O75665 1012 aa15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 TTLL7Q6ZT98 887 aa15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 CEP152O94986 1710 aa15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 ZSCAN22P10073 491 aaPredicted RBP15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 SPTY2D1Q68D10 685 aaPredicted RBP15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 CCDC129Q6ZRS4 1044 aa15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 CCDC171Q6TFL3 1326 aa15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 A0A0U1RQG5 324 aaPredicted RBP15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 FSIP1Q8NA03 581 aa15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 CRNKL1Q9BZJ0 848 aaKnown RBP15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 GLI2P10070 1586 aa15.23■□□□□ 0.03
PCDHGB1-201ENST00000523390 ESPNB1AK53 854 aa15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 NAP1L1P55209 391 aaKnown RBP15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 CCDC96Q2M329 555 aa15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 SLF2Q8IX21 1173 aa15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 MAGEC2Q9UBF1 373 aaPredicted RBP15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 STX8Q9UNK0 236 aa15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 ERVV-2B6SEH9 535 aa15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 F8W031 263 aaPredicted RBP15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 PDE4BQ07343 736 aa15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 CCDC24Q8N4L8 307 aa15.22■□□□□ 0.03
PCDHGB1-201ENST00000523390 FAM227BQ96M60 508 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms