RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
GM2A-202ENST00000523004 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
GM2A-202ENST00000523004 ABT1Q9ULW3 272 aaKnown RBP10.31□□□□□ -0.76
GM2A-202ENST00000523004 SH3TC1Q8TE82 1336 aa10.31□□□□□ -0.76
GM2A-202ENST00000523004 TRAF5O00463 557 aa10.3□□□□□ -0.76
GM2A-202ENST00000523004 LBX1P52954 281 aa10.3□□□□□ -0.76
GM2A-202ENST00000523004 GRAPQ13588 217 aa10.3□□□□□ -0.76
GM2A-202ENST00000523004 DPP8Q6V1X1 898 aaPredicted RBP10.3□□□□□ -0.76
GM2A-202ENST00000523004 DDX46Q7L014 1031 aaKnown RBP10.3□□□□□ -0.76
GM2A-202ENST00000523004 MPNDQ8N594 471 aa10.3□□□□□ -0.76
GM2A-202ENST00000523004 GRAPLQ8TC17 118 aaPredicted RBP10.3□□□□□ -0.76
GM2A-202ENST00000523004 ADARB2Q9NS39 739 aaKnown RBP10.3□□□□□ -0.76
GM2A-202ENST00000523004 TRIM35Q9UPQ4 493 aa10.3□□□□□ -0.76
GM2A-202ENST00000523004 MYBBP1AQ9BQG0 1328 aaKnown RBP10.3□□□□□ -0.76
GM2A-202ENST00000523004 HSPA8P11142 646 aaKnown RBP10.29□□□□□ -0.76
GM2A-202ENST00000523004 GMPSP49915 693 aaPredicted RBP10.29□□□□□ -0.76
GM2A-202ENST00000523004 NEUROD2Q15784 382 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 CIAPIN1Q6FI81 312 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 TMC4Q7Z404 712 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 CCDC146Q8IYE0 955 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 PLBD2Q8NHP8 589 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 CAPNS2Q96L46 248 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 CHPF2Q9P2E5 772 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 PGAP2Q9UHJ9 254 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 CDHR2Q9BYE9 1310 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 THSD7BQ9C0I4 1608 aa10.29□□□□□ -0.76
GM2A-202ENST00000523004 LRRC37AA6NMS7 1700 aa10.28□□□□□ -0.76
GM2A-202ENST00000523004 DDX60Q8IY21 1712 aaKnown RBP10.28□□□□□ -0.76
GM2A-202ENST00000523004 DUOX1Q9NRD9 1551 aa10.28□□□□□ -0.76
GM2A-202ENST00000523004 HOXB7P09629 217 aa10.28□□□□□ -0.76
GM2A-202ENST00000523004 ECE1P42892 770 aa10.28□□□□□ -0.76
GM2A-202ENST00000523004 TNIP1Q15025 636 aa10.28□□□□□ -0.76
GM2A-202ENST00000523004 ANKRD13DQ6ZTN6 518 aa10.28□□□□□ -0.76
GM2A-202ENST00000523004 RUNDC1Q96C34 613 aa10.28□□□□□ -0.76
GM2A-202ENST00000523004 ISCA1Q9BUE6 129 aa10.28□□□□□ -0.76
GM2A-202ENST00000523004 DBF4Q9UBU7 674 aaPredicted RBP10.28□□□□□ -0.76
GM2A-202ENST00000523004 LAS1LQ9Y4W2 734 aaKnown RBP10.28□□□□□ -0.76
GM2A-202ENST00000523004 TLL2Q9Y6L7 1015 aa10.28□□□□□ -0.76
GM2A-202ENST00000523004 YDJCA8MPS7 323 aa10.27□□□□□ -0.77
GM2A-202ENST00000523004 RAD17O75943 681 aa10.27□□□□□ -0.77
GM2A-202ENST00000523004 HIRAP54198 1017 aaPredicted RBP10.27□□□□□ -0.77
GM2A-202ENST00000523004 DDX10Q13206 875 aaKnown RBP10.27□□□□□ -0.77
GM2A-202ENST00000523004 SF3B3Q15393 1217 aaKnown RBP10.27□□□□□ -0.77
GM2A-202ENST00000523004 HDGFL1Q5TGJ6 251 aa10.27□□□□□ -0.77
GM2A-202ENST00000523004 CYP4F22Q6NT55 531 aa10.27□□□□□ -0.77
GM2A-202ENST00000523004 SAPCD2Q86UD0 394 aa10.27□□□□□ -0.77
GM2A-202ENST00000523004 ZC3H15Q8WU90 426 aaKnown RBP10.27□□□□□ -0.77
GM2A-202ENST00000523004 GPR101Q96P66 508 aaPredicted RBP10.27□□□□□ -0.77
GM2A-202ENST00000523004 POLR2AP24928 1970 aaKnown RBP10.26□□□□□ -0.77
GM2A-202ENST00000523004 CELF2O95319 508 aaKnown RBP10.26□□□□□ -0.77
GM2A-202ENST00000523004 MAP2K2P36507 400 aa10.26□□□□□ -0.77
GM2A-202ENST00000523004 TRIM28Q13263 835 aaKnown RBP10.26□□□□□ -0.77
GM2A-202ENST00000523004 WDR43Q15061 677 aaKnown RBP eCLIP10.26□□□□□ -0.77
GM2A-202ENST00000523004 PAXIP1Q6ZW49 1069 aaPredicted RBP10.26□□□□□ -0.77
GM2A-202ENST00000523004 ZNF428Q96B54 188 aa10.26□□□□□ -0.77
GM2A-202ENST00000523004 FAM89AQ96GI7 184 aa10.26□□□□□ -0.77
GM2A-202ENST00000523004 HHIPL1Q96JK4 782 aa10.26□□□□□ -0.77
GM2A-202ENST00000523004 CFAP44Q96MT7 982 aa10.26□□□□□ -0.77
GM2A-202ENST00000523004 BCL2L13Q9BXK5 485 aa10.26□□□□□ -0.77
GM2A-202ENST00000523004 GLIS2Q9BZE0 524 aaPredicted RBP10.26□□□□□ -0.77
GM2A-202ENST00000523004 HYPKQ9NX55 129 aa10.26□□□□□ -0.77
GM2A-202ENST00000523004 CNOT7Q9UIV1 285 aaKnown RBP10.26□□□□□ -0.77
GM2A-202ENST00000523004 ADAMTS8Q9UP79 889 aa10.26□□□□□ -0.77
GM2A-202ENST00000523004 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
GM2A-202ENST00000523004 WASHC4Q2M389 1173 aa10.25□□□□□ -0.77
GM2A-202ENST00000523004 DUSP27Q5VZP5 1158 aa10.25□□□□□ -0.77
GM2A-202ENST00000523004 TRPM4Q8TD43 1214 aa10.25□□□□□ -0.77
GM2A-202ENST00000523004 DPF2Q92785 391 aa10.25□□□□□ -0.77
GM2A-202ENST00000523004 CELF1Q92879 486 aaKnown RBP10.25□□□□□ -0.77
GM2A-202ENST00000523004 BEGAINQ9BUH8 593 aa10.25□□□□□ -0.77
GM2A-202ENST00000523004 SHTN1A0MZ66 631 aa10.24□□□□□ -0.77
GM2A-202ENST00000523004 H7C1D1 291 aa10.24□□□□□ -0.77
GM2A-202ENST00000523004 ZNF853P0CG23 659 aa10.24□□□□□ -0.77
GM2A-202ENST00000523004 GRM1Q13255 1194 aa10.24□□□□□ -0.77
GM2A-202ENST00000523004 CDC37L1Q7L3B6 337 aa10.24□□□□□ -0.77
GM2A-202ENST00000523004 MICALL2Q8IY33 904 aa10.24□□□□□ -0.77
GM2A-202ENST00000523004 MBIPQ9NS73 344 aa10.24□□□□□ -0.77
GM2A-202ENST00000523004 POLLQ9UGP5 575 aa10.24□□□□□ -0.77
GM2A-202ENST00000523004 NSFL1CQ9UNZ2 370 aaKnown RBP10.24□□□□□ -0.77
GM2A-202ENST00000523004 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
GM2A-202ENST00000523004 COL4A1P02462 1669 aa10.24□□□□□ -0.77
GM2A-202ENST00000523004 PSMD14O00487 310 aa10.23□□□□□ -0.77
GM2A-202ENST00000523004 IRS4O14654 1257 aaPredicted RBP10.23□□□□□ -0.77
GM2A-202ENST00000523004 AOC2O75106 756 aa10.23□□□□□ -0.77
GM2A-202ENST00000523004 RPS8P62241 208 aaKnown RBP10.23□□□□□ -0.77
GM2A-202ENST00000523004 GPSM2P81274 684 aa10.23□□□□□ -0.77
GM2A-202ENST00000523004 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
GM2A-202ENST00000523004 ABHD8Q96I13 439 aa10.23□□□□□ -0.77
GM2A-202ENST00000523004 DBNDD1Q9H9R9 158 aa10.23□□□□□ -0.77
GM2A-202ENST00000523004 SCN9AQ15858 1988 aa10.23□□□□□ -0.77
GM2A-202ENST00000523004 CASP8AP2Q9UKL3 1982 aa10.23□□□□□ -0.77
GM2A-202ENST00000523004 C6orf229H3BNL8 230 aa10.22□□□□□ -0.77
GM2A-202ENST00000523004 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
GM2A-202ENST00000523004 CA12O43570 354 aa10.22□□□□□ -0.77
GM2A-202ENST00000523004 RPS12P25398 132 aaKnown RBP10.22□□□□□ -0.77
GM2A-202ENST00000523004 SAMD7Q7Z3H4 446 aa10.22□□□□□ -0.77
GM2A-202ENST00000523004 USP48Q86UV5 1035 aa10.22□□□□□ -0.77
GM2A-202ENST00000523004 ZBTB38Q8NAP3 1195 aaPredicted RBP10.22□□□□□ -0.77
GM2A-202ENST00000523004 TBC1D16Q8TBP0 767 aa10.22□□□□□ -0.77
GM2A-202ENST00000523004 PHAXQ9H814 394 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms