RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 MX1P20591 662 aa18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 HSP90AB4PQ58FF6 505 aa18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 TLR7Q9NYK1 1049 aaKnown RBP18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 TFCP2L1Q9NZI6 479 aa18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 CASZ1Q86V15 1759 aa18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 PDE8AO60658 829 aa18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 TFCP2Q12800 502 aa18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 CCDC57Q2TAC2 916 aa18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 TTC22Q5TAA0 569 aa18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 ATG9AQ7Z3C6 839 aa18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 EAF2Q96CJ1 260 aaPredicted RBP18.57■□□□□ 0.56
CSGALNACT1-211ENST00000522854 TAF1P21675 1872 aa18.56■□□□□ 0.56
CSGALNACT1-211ENST00000522854 COL4A1P02462 1669 aa18.56■□□□□ 0.56
CSGALNACT1-211ENST00000522854 ITGA6P23229 1130 aa18.56■□□□□ 0.56
CSGALNACT1-211ENST00000522854 SETDB2Q96T68 719 aa18.56■□□□□ 0.56
CSGALNACT1-211ENST00000522854 CCDC8Q9H0W5 538 aaPredicted RBP18.56■□□□□ 0.56
CSGALNACT1-211ENST00000522854 ABCC12Q96J65 1359 aa18.56■□□□□ 0.56
CSGALNACT1-211ENST00000522854 DEFB132Q7Z7B7 95 aa18.55■□□□□ 0.56
CSGALNACT1-211ENST00000522854 AACSQ86V21 672 aa18.55■□□□□ 0.56
CSGALNACT1-211ENST00000522854 GYS1P13807 737 aa18.55■□□□□ 0.56
CSGALNACT1-211ENST00000522854 IFIT5Q13325 482 aaKnown RBP18.55■□□□□ 0.56
CSGALNACT1-211ENST00000522854 NFIXQ14938 502 aa18.55■□□□□ 0.56
CSGALNACT1-211ENST00000522854 BMP2KLQ5H9B9 411 aa18.55■□□□□ 0.56
CSGALNACT1-211ENST00000522854 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
CSGALNACT1-211ENST00000522854 SEC31BQ9NQW1 1179 aa18.55■□□□□ 0.56
CSGALNACT1-211ENST00000522854 COL24A1Q17RW2 1714 aa18.54■□□□□ 0.56
CSGALNACT1-211ENST00000522854 MAP4K4O95819 1239 aaPredicted RBP18.54■□□□□ 0.56
CSGALNACT1-211ENST00000522854 SSFA2P28290 1259 aa18.54■□□□□ 0.56
CSGALNACT1-211ENST00000522854 ERC1Q8IUD2 1116 aa18.54■□□□□ 0.56
CSGALNACT1-211ENST00000522854 CLASRPQ8N2M8 674 aaKnown RBP18.54■□□□□ 0.56
CSGALNACT1-211ENST00000522854 MSH5O43196 834 aa18.53■□□□□ 0.56
CSGALNACT1-211ENST00000522854 GTF2E1P29083 439 aaPredicted RBP18.53■□□□□ 0.56
CSGALNACT1-211ENST00000522854 NBPF5PQ86XG9 351 aaPredicted RBP18.53■□□□□ 0.56
CSGALNACT1-211ENST00000522854 LAMB2P55268 1798 aa18.53■□□□□ 0.56
CSGALNACT1-211ENST00000522854 ADRA2BP18089 450 aa18.53■□□□□ 0.56
CSGALNACT1-211ENST00000522854 COL23A1Q86Y22 540 aaPredicted RBP18.53■□□□□ 0.56
CSGALNACT1-211ENST00000522854 CAMKK2Q96RR4 588 aa18.53■□□□□ 0.56
CSGALNACT1-211ENST00000522854 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
CSGALNACT1-211ENST00000522854 SPEF2Q9C093 1822 aa18.53■□□□□ 0.56
CSGALNACT1-211ENST00000522854 EYA2O00167 538 aa18.52■□□□□ 0.56
CSGALNACT1-211ENST00000522854 SDSP20132 328 aa18.52■□□□□ 0.56
CSGALNACT1-211ENST00000522854 TAF7LQ5H9L4 462 aa18.52■□□□□ 0.56
CSGALNACT1-211ENST00000522854 IFIT2P09913 472 aaKnown RBP18.51■□□□□ 0.55
CSGALNACT1-211ENST00000522854 OSBPL3Q9H4L5 887 aa18.51■□□□□ 0.55
CSGALNACT1-211ENST00000522854 ANKRD18BA2A2Z9 1011 aa18.51■□□□□ 0.55
CSGALNACT1-211ENST00000522854 PI4K2BQ8TCG2 481 aa18.51■□□□□ 0.55
CSGALNACT1-211ENST00000522854 TNNI3KQ59H18 835 aa18.5■□□□□ 0.55
CSGALNACT1-211ENST00000522854 STAP2Q9UGK3 403 aa18.5■□□□□ 0.55
CSGALNACT1-211ENST00000522854 FPGT-TNNI3KV9GXZ4 949 aa18.5■□□□□ 0.55
CSGALNACT1-211ENST00000522854 TIMM10P62072 90 aa18.5■□□□□ 0.55
CSGALNACT1-211ENST00000522854 LDHAL6AQ6ZMR3 332 aa18.5■□□□□ 0.55
CSGALNACT1-211ENST00000522854 RGPD3A6NKT7 1758 aaPredicted RBP18.49■□□□□ 0.55
CSGALNACT1-211ENST00000522854 RGPD4Q7Z3J3 1758 aa18.49■□□□□ 0.55
CSGALNACT1-211ENST00000522854 TNRC6CQ9HCJ0 1690 aaKnown RBP18.49■□□□□ 0.55
CSGALNACT1-211ENST00000522854 NPHP1O15259 732 aa18.49■□□□□ 0.55
CSGALNACT1-211ENST00000522854 DBNLQ9UJU6 430 aaKnown RBP18.49■□□□□ 0.55
CSGALNACT1-211ENST00000522854 PNPLA7Q6ZV29 1317 aa18.49■□□□□ 0.55
CSGALNACT1-211ENST00000522854 IL15P40933 162 aaPredicted RBP18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 RGL2O15211 777 aa18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 DDR1Q08345 913 aa18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 MSL1Q68DK7 614 aa18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 TPTE2Q6XPS3 522 aa18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 TBC1D9Q6ZT07 1266 aa18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 RILPL2Q969X0 211 aa18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
CSGALNACT1-211ENST00000522854 RIC1Q4ADV7 1423 aa18.47■□□□□ 0.55
CSGALNACT1-211ENST00000522854 CCDC152Q4G0S7 254 aa18.47■□□□□ 0.55
CSGALNACT1-211ENST00000522854 HELBQ8NG08 1087 aaPredicted RBP18.47■□□□□ 0.55
CSGALNACT1-211ENST00000522854 NEUROD6Q96NK8 337 aa18.47■□□□□ 0.55
CSGALNACT1-211ENST00000522854 CNNM1Q9NRU3 951 aa18.47■□□□□ 0.55
CSGALNACT1-211ENST00000522854 RIPOR2Q9Y4F9 1068 aa18.47■□□□□ 0.55
CSGALNACT1-211ENST00000522854 NDUFB9Q9Y6M9 179 aa18.47■□□□□ 0.55
CSGALNACT1-211ENST00000522854 CIAO1O76071 339 aa18.46■□□□□ 0.55
CSGALNACT1-211ENST00000522854 SLC51AQ86UW1 340 aa18.46■□□□□ 0.55
CSGALNACT1-211ENST00000522854 NYXQ9GZU5 481 aa18.46■□□□□ 0.55
CSGALNACT1-211ENST00000522854 SNAP23O00161 211 aa18.46■□□□□ 0.55
CSGALNACT1-211ENST00000522854 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.55
CSGALNACT1-211ENST00000522854 PDGFDQ9GZP0 370 aaPredicted RBP18.46■□□□□ 0.55
CSGALNACT1-211ENST00000522854 ECHDC1Q9NTX5 307 aa18.46■□□□□ 0.55
CSGALNACT1-211ENST00000522854 TM4SF1P30408 202 aa18.45■□□□□ 0.54
CSGALNACT1-211ENST00000522854 SF3B2Q13435 895 aaKnown RBP18.45■□□□□ 0.54
CSGALNACT1-211ENST00000522854 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
CSGALNACT1-211ENST00000522854 CNBD1Q8NA66 436 aa18.45■□□□□ 0.54
CSGALNACT1-211ENST00000522854 AK9Q5TCS8 1911 aa18.45■□□□□ 0.54
CSGALNACT1-211ENST00000522854 SERPINB2P05120 415 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 METTL24Q5JXM2 366 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 SLC10A5Q5PT55 438 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 BOLA2Q9H3K6 86 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 CEP126Q9P2H0 1117 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 A0A1B0GUL7 405 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 ZNF609O15014 1411 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 LRP5O75197 1615 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 TAF5LO75529 589 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 ADORA1P30542 326 aa18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 CELF1Q92879 486 aaKnown RBP18.44■□□□□ 0.54
CSGALNACT1-211ENST00000522854 TTC41PQ6P2S7 1318 aa18.43■□□□□ 0.54
CSGALNACT1-211ENST00000522854 POLRMTO00411 1230 aaKnown RBP18.43■□□□□ 0.54
CSGALNACT1-211ENST00000522854 CDC45O75419 566 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms