RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.35
RAB11FIP1-204ENST00000522774 PPP1R9BQ96SB3 815 aa12.9□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ZBTB3Q9H5J0 574 aa12.9□□□□□ -0.35
RAB11FIP1-204ENST00000522774 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TJP1Q07157 1748 aa12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 JCADQ9P266 1359 aa12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 IL2RBP14784 551 aa12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 GJB2P29033 226 aa12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TRIM44Q96DX7 344 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 DNAJC2Q99543 621 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TPCN1Q9ULQ1 816 aa12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 CNPY2Q9Y2B0 182 aa12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 PAPPAQ13219 1627 aa12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 NKX1-1Q15270 411 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ABCA3Q99758 1704 aa12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ESPNB1AK53 854 aa12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TAF5LO75529 589 aa12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 CARD10Q9BWT7 1032 aa12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 CWC25Q9NXE8 425 aaPredicted RBP12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 F13A1P00488 732 aa12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ATG9AQ7Z3C6 839 aa12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ZNF609O15014 1411 aa12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 STRCQ7RTU9 1775 aa12.88□□□□□ -0.35
RAB11FIP1-204ENST00000522774 CLCN1P35523 988 aa12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 CCDC129Q6ZRS4 1044 aa12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 SEC62Q99442 399 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ANO8Q9HCE9 1232 aaPredicted RBP12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 MTMR6Q9Y217 621 aa12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 PSMA5P28066 241 aa12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TMEM87AQ8NBN3 555 aa12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 HAUS7Q99871 368 aa12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TNS2Q63HR2 1409 aa12.87□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TOGARAM1Q9Y4F4 1720 aa12.86□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
RAB11FIP1-204ENST00000522774 RNF20Q5VTR2 975 aa12.86□□□□□ -0.35
RAB11FIP1-204ENST00000522774 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ANP32BQ92688 251 aaKnown RBP12.86□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ZNF594Q96JF6 807 aaPredicted RBP12.86□□□□□ -0.35
RAB11FIP1-204ENST00000522774 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TIMM10P62072 90 aa12.85□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
RAB11FIP1-204ENST00000522774 SLFNL1Q499Z3 407 aa12.85□□□□□ -0.35
RAB11FIP1-204ENST00000522774 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
RAB11FIP1-204ENST00000522774 USPL1Q5W0Q7 1092 aa12.85□□□□□ -0.35
RAB11FIP1-204ENST00000522774 NEUROD6Q96NK8 337 aa12.85□□□□□ -0.35
RAB11FIP1-204ENST00000522774 CCDC191Q8NCU4 936 aa12.85□□□□□ -0.35
RAB11FIP1-204ENST00000522774 FIBPO43427 364 aa12.85□□□□□ -0.35
RAB11FIP1-204ENST00000522774 EVA1CP58658 441 aa12.85□□□□□ -0.35
RAB11FIP1-204ENST00000522774 RFX7Q2KHR2 1363 aa12.84□□□□□ -0.35
RAB11FIP1-204ENST00000522774 TSGA10IPQ3SY00 556 aa12.84□□□□□ -0.35
RAB11FIP1-204ENST00000522774 RNF214Q8ND24 703 aa12.84□□□□□ -0.35
RAB11FIP1-204ENST00000522774 HMG20BQ9P0W2 317 aa12.84□□□□□ -0.35
RAB11FIP1-204ENST00000522774 ZNF330Q9Y3S2 320 aaPredicted RBP12.84□□□□□ -0.35
RAB11FIP1-204ENST00000522774 VPS37CA5D8V6 355 aaPredicted RBP12.84□□□□□ -0.35
RAB11FIP1-204ENST00000522774 DNM1Q05193 864 aaKnown RBP12.84□□□□□ -0.35
RAB11FIP1-204ENST00000522774 PUS3Q9BZE2 481 aaKnown RBP12.84□□□□□ -0.35
RAB11FIP1-204ENST00000522774 KBTBD3Q8NAB2 608 aa12.83□□□□□ -0.36
RAB11FIP1-204ENST00000522774 SYAP1Q96A49 352 aaPredicted RBP12.83□□□□□ -0.36
RAB11FIP1-204ENST00000522774 GOLIM4O00461 696 aa12.83□□□□□ -0.36
RAB11FIP1-204ENST00000522774 IL15P40933 162 aaPredicted RBP12.83□□□□□ -0.36
RAB11FIP1-204ENST00000522774 MCMDC2Q4G0Z9 681 aa12.83□□□□□ -0.36
RAB11FIP1-204ENST00000522774 PDLIM2Q96JY6 352 aa12.83□□□□□ -0.36
RAB11FIP1-204ENST00000522774 EYA2O00167 538 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 STK3Q13188 491 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 ALDH8A1Q9H2A2 487 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 TSPY26PQ9H489 355 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 TMOD3Q9NYL9 352 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 ASAP1Q9ULH1 1129 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 CYP21A2P08686 494 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 ANKRD1Q15327 319 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 PAG1Q9NWQ8 432 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 ATP6V1DQ9Y5K8 247 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 UBE2HP62256 183 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 CDC37L1Q7L3B6 337 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 DNAJC10Q8IXB1 793 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 GPR108Q9NPR9 543 aa12.82□□□□□ -0.36
RAB11FIP1-204ENST00000522774 LARP1BQ659C4 914 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP1-204ENST00000522774 PIGBQ92521 554 aa12.81□□□□□ -0.36
RAB11FIP1-204ENST00000522774 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP1-204ENST00000522774 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
RAB11FIP1-204ENST00000522774 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
RAB11FIP1-204ENST00000522774 FERMT3Q86UX7 667 aa12.81□□□□□ -0.36
RAB11FIP1-204ENST00000522774 NEK1Q96PY6 1258 aa12.81□□□□□ -0.36
RAB11FIP1-204ENST00000522774 SH3TC1Q8TE82 1336 aa12.81□□□□□ -0.36
RAB11FIP1-204ENST00000522774 TCIRG1Q13488 830 aa12.8□□□□□ -0.36
RAB11FIP1-204ENST00000522774 KRT32Q14532 448 aa12.8□□□□□ -0.36
RAB11FIP1-204ENST00000522774 STOX1Q6ZVD7 989 aa12.8□□□□□ -0.36
RAB11FIP1-204ENST00000522774 CCDC85AQ96PX6 553 aaPredicted RBP12.8□□□□□ -0.36
RAB11FIP1-204ENST00000522774 CCDC183Q5T5S1 534 aa12.8□□□□□ -0.36
RAB11FIP1-204ENST00000522774 FAM173BQ6P4H8 233 aa12.8□□□□□ -0.36
RAB11FIP1-204ENST00000522774 FAM89AQ96GI7 184 aa12.8□□□□□ -0.36
RAB11FIP1-204ENST00000522774 LRRC2Q9BYS8 371 aa12.8□□□□□ -0.36
RAB11FIP1-204ENST00000522774 NHSL1Q5SYE7 1610 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms