RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 WDR4P57081 412 aaKnown RBP8.83□□□□□ -1
PABPC1-220ENST00000522658 PDE4DQ08499 809 aa8.83□□□□□ -1
PABPC1-220ENST00000522658 QPCTQ16769 361 aa8.83□□□□□ -1
PABPC1-220ENST00000522658 HDGFL2Q7Z4V5 671 aaPredicted RBP8.83□□□□□ -1
PABPC1-220ENST00000522658 ARHGEF25Q86VW2 580 aa8.83□□□□□ -1
PABPC1-220ENST00000522658 ZNF784Q8NCA9 323 aaPredicted RBP8.83□□□□□ -1
PABPC1-220ENST00000522658 ARXQ96QS3 562 aa8.83□□□□□ -1
PABPC1-220ENST00000522658 NHSQ6T4R5 1651 aa8.83□□□□□ -1
PABPC1-220ENST00000522658 H3BM21 787 aa8.82□□□□□ -1
PABPC1-220ENST00000522658 IL2RBP14784 551 aa8.82□□□□□ -1
PABPC1-220ENST00000522658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.82□□□□□ -1
PABPC1-220ENST00000522658 SYT17Q9BSW7 474 aa8.82□□□□□ -1
PABPC1-220ENST00000522658 GIGYF1O75420 1035 aaPredicted RBP8.81□□□□□ -1
PABPC1-220ENST00000522658 GMPRP36959 345 aa8.81□□□□□ -1
PABPC1-220ENST00000522658 GRM5P41594 1212 aa8.81□□□□□ -1
PABPC1-220ENST00000522658 CSPP1Q1MSJ5 1256 aa8.81□□□□□ -1
PABPC1-220ENST00000522658 TMC1Q8TDI8 760 aa8.81□□□□□ -1
PABPC1-220ENST00000522658 SYTL4Q96C24 671 aaPredicted RBP8.81□□□□□ -1
PABPC1-220ENST00000522658 NFAT5O94916 1531 aa8.8□□□□□ -1
PABPC1-220ENST00000522658 VEGFBP49765 207 aa8.8□□□□□ -1
PABPC1-220ENST00000522658 IRF7Q92985 503 aa8.8□□□□□ -1
PABPC1-220ENST00000522658 PDGFDQ9GZP0 370 aaPredicted RBP8.8□□□□□ -1
PABPC1-220ENST00000522658 COL18A1P39060 1754 aa8.8□□□□□ -1
PABPC1-220ENST00000522658 ERBB4Q15303 1308 aa8.8□□□□□ -1
PABPC1-220ENST00000522658 RGPD5Q99666 1765 aa8.79□□□□□ -1
PABPC1-220ENST00000522658 NR3C2P08235 984 aa8.79□□□□□ -1
PABPC1-220ENST00000522658 NR5A1Q13285 461 aa8.79□□□□□ -1
PABPC1-220ENST00000522658 PTF1AQ7RTS3 328 aa8.79□□□□□ -1
PABPC1-220ENST00000522658 SH3RF1Q7Z6J0 888 aa8.79□□□□□ -1
PABPC1-220ENST00000522658 ANKRD24Q8TF21 1146 aa8.79□□□□□ -1
PABPC1-220ENST00000522658 PURBQ96QR8 312 aaKnown RBP8.79□□□□□ -1
PABPC1-220ENST00000522658 C1QTNF2Q9BXJ5 285 aa8.79□□□□□ -1
PABPC1-220ENST00000522658 TFCP2L1Q9NZI6 479 aa8.79□□□□□ -1
PABPC1-220ENST00000522658 MAP3K5Q99683 1374 aa8.78□□□□□ -1
PABPC1-220ENST00000522658 HMGB2P26583 209 aaKnown RBP8.78□□□□□ -1
PABPC1-220ENST00000522658 C1QTNF8P60827 252 aa8.78□□□□□ -1
PABPC1-220ENST00000522658 NEUROD1Q13562 356 aa8.78□□□□□ -1
PABPC1-220ENST00000522658 BPHLQ86WA6 291 aaPredicted RBP8.78□□□□□ -1
PABPC1-220ENST00000522658 DDX54Q8TDD1 881 aaKnown RBP8.78□□□□□ -1
PABPC1-220ENST00000522658 ITPKCQ96DU7 683 aa8.78□□□□□ -1
PABPC1-220ENST00000522658 ZFAND3Q9H8U3 227 aa8.78□□□□□ -1
PABPC1-220ENST00000522658 TERF2IPQ9NYB0 399 aa8.78□□□□□ -1
PABPC1-220ENST00000522658 CHD4Q14839 1912 aa8.78□□□□□ -1
PABPC1-220ENST00000522658 MON2Q7Z3U7 1717 aa8.77□□□□□ -1
PABPC1-220ENST00000522658 LTN1O94822 1766 aa8.77□□□□□ -1.01
PABPC1-220ENST00000522658 ZIC2O95409 532 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-220ENST00000522658 SCARF1Q14162 830 aa8.77□□□□□ -1.01
PABPC1-220ENST00000522658 SLC27A3Q5K4L6 730 aa8.77□□□□□ -1.01
PABPC1-220ENST00000522658 L3MBTL2Q969R5 705 aa8.77□□□□□ -1.01
PABPC1-220ENST00000522658 LTV1Q96GA3 475 aaPredicted RBP8.77□□□□□ -1.01
PABPC1-220ENST00000522658 FAM208AQ9UK61 1670 aaKnown RBP8.77□□□□□ -1.01
PABPC1-220ENST00000522658 EDC4Q6P2E9 1401 aaKnown RBP8.77□□□□□ -1.01
PABPC1-220ENST00000522658 SMG6Q86US8 1419 aaKnown RBP8.77□□□□□ -1.01
PABPC1-220ENST00000522658 BTAF1O14981 1849 aa8.77□□□□□ -1.01
PABPC1-220ENST00000522658 ARID5BQ14865 1188 aa8.76□□□□□ -1.01
PABPC1-220ENST00000522658 RTL5Q5HYW3 569 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-220ENST00000522658 SH3BP5LQ7L8J4 393 aa8.76□□□□□ -1.01
PABPC1-220ENST00000522658 NME9Q86XW9 330 aa8.76□□□□□ -1.01
PABPC1-220ENST00000522658 CARD11Q9BXL7 1154 aa8.76□□□□□ -1.01
PABPC1-220ENST00000522658 SLC24A3Q9HC58 644 aa8.76□□□□□ -1.01
PABPC1-220ENST00000522658 PAPPAQ13219 1627 aa8.76□□□□□ -1.01
PABPC1-220ENST00000522658 SOBPA7XYQ1 873 aa8.75□□□□□ -1.01
PABPC1-220ENST00000522658 GRIN3BO60391 1043 aa8.75□□□□□ -1.01
PABPC1-220ENST00000522658 AMPHP49418 695 aa8.75□□□□□ -1.01
PABPC1-220ENST00000522658 AGERQ15109 404 aa8.75□□□□□ -1.01
PABPC1-220ENST00000522658 ZNF827Q17R98 1081 aa8.75□□□□□ -1.01
PABPC1-220ENST00000522658 ARMC2Q8NEN0 867 aa8.75□□□□□ -1.01
PABPC1-220ENST00000522658 COG3Q96JB2 828 aa8.75□□□□□ -1.01
PABPC1-220ENST00000522658 USP31Q70CQ4 1352 aa8.74□□□□□ -1.01
PABPC1-220ENST00000522658 USP47Q96K76 1375 aa8.74□□□□□ -1.01
PABPC1-220ENST00000522658 KAT6BQ8WYB5 2073 aa8.74□□□□□ -1.01
PABPC1-220ENST00000522658 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
PABPC1-220ENST00000522658 TRMT44Q8IYL2 757 aaKnown RBP8.74□□□□□ -1.01
PABPC1-220ENST00000522658 TSC1Q92574 1164 aa8.74□□□□□ -1.01
PABPC1-220ENST00000522658 CCNL1Q9UK58 526 aaPredicted RBP8.74□□□□□ -1.01
PABPC1-220ENST00000522658 MAP4K5Q9Y4K4 846 aa8.74□□□□□ -1.01
PABPC1-220ENST00000522658 USP54Q70EL1 1684 aa8.74□□□□□ -1.01
PABPC1-220ENST00000522658 SBNO2Q9Y2G9 1366 aa8.73□□□□□ -1.01
PABPC1-220ENST00000522658 CLK2P49760 499 aaKnown RBP8.73□□□□□ -1.01
PABPC1-220ENST00000522658 ZSCAN1Q8NBB4 408 aa8.73□□□□□ -1.01
PABPC1-220ENST00000522658 A0A1W2PP64 1363 aa8.73□□□□□ -1.01
PABPC1-220ENST00000522658 ANKRD36BQ8N2N9 1353 aa8.73□□□□□ -1.01
PABPC1-220ENST00000522658 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
PABPC1-220ENST00000522658 QSER1Q2KHR3 1735 aa8.72□□□□□ -1.01
PABPC1-220ENST00000522658 DOT1LQ8TEK3 1739 aa8.72□□□□□ -1.01
PABPC1-220ENST00000522658 MEIOBQ8N635 442 aa8.72□□□□□ -1.01
PABPC1-220ENST00000522658 HELBQ8NG08 1087 aaPredicted RBP8.72□□□□□ -1.01
PABPC1-220ENST00000522658 RAPGEF4Q8WZA2 1011 aa8.72□□□□□ -1.01
PABPC1-220ENST00000522658 LRRC4BQ9NT99 713 aa8.72□□□□□ -1.01
PABPC1-220ENST00000522658 PNPLA7Q6ZV29 1317 aa8.72□□□□□ -1.01
PABPC1-220ENST00000522658 SLC24A1O60721 1099 aa8.71□□□□□ -1.02
PABPC1-220ENST00000522658 ZCRB1Q8TBF4 217 aaKnown RBP8.71□□□□□ -1.02
PABPC1-220ENST00000522658 IP6K1Q92551 441 aa8.71□□□□□ -1.02
PABPC1-220ENST00000522658 RTL1A6NKG5 1358 aa8.71□□□□□ -1.02
PABPC1-220ENST00000522658 NSD3Q9BZ95 1437 aa8.71□□□□□ -1.02
PABPC1-220ENST00000522658 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-220ENST00000522658 MSL1Q68DK7 614 aa8.7□□□□□ -1.02
PABPC1-220ENST00000522658 LINC00528Q8N1L1 170 aa8.7□□□□□ -1.02
PABPC1-220ENST00000522658 FLAD1Q8NFF5 587 aa8.7□□□□□ -1.02
PABPC1-220ENST00000522658 NLGN2Q8NFZ4 835 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms