RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	TIGD1	Q96MW7	591 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	ANKRD13D	Q6ZTN6	518 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	HOOK3	Q86VS8	718 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	C6orf50	Q9HD87	102 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	BCAR3	O75815	825 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	TSPY3	P0CV98	308 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	TSPY8	P0CW00	308 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	NEK4	P51957	841 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	SMARCC2	Q8TAQ2	1214 aa		11.9	□□□□□ -0.5
TCF7-223	ENST00000522653	CFAP43	Q8NDM7	1665 aa		11.9	□□□□□ -0.51
TCF7-223	ENST00000522653	ZBED4	O75132	1171 aa		11.9	□□□□□ -0.51
TCF7-223	ENST00000522653	EIF3J	O75822	258 aa	Known RBP	11.9	□□□□□ -0.51
TCF7-223	ENST00000522653	ALDH1L1	O75891	902 aa		11.9	□□□□□ -0.51
TCF7-223	ENST00000522653	CALM1	P0DP23	149 aa		11.9	□□□□□ -0.51
TCF7-223	ENST00000522653	CALM2	P0DP24	149 aa		11.9	□□□□□ -0.51
TCF7-223	ENST00000522653	CALM3	P0DP25	149 aa		11.9	□□□□□ -0.51
TCF7-223	ENST00000522653	DENND2A	Q9ULE3	1009 aa		11.9	□□□□□ -0.51
TCF7-223	ENST00000522653	SYCE3	A1L190	88 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	CDC37L1	Q7L3B6	337 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	PPFIBP1	Q86W92	1011 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	CCDC94	Q9BW85	323 aa	Predicted RBP	11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	KIF2A	O00139	706 aa	Predicted RBP	11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	NME9	Q86XW9	330 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	TCP11L1	Q9NUJ3	509 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	KRT27	Q7Z3Y8	459 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	FLT4	P35916	1363 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	RAD50	Q92878	1312 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	STX6	O43752	255 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	NEFH	P12036	1026 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	ADAMTS12	P58397	1594 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	NAA16	Q6N069	864 aa	Predicted RBP	11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	MPND	Q8N594	471 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	BICD1	Q96G01	975 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	IMPG2	Q9BZV3	1241 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	ZFYVE16	Q7Z3T8	1539 aa		11.89	□□□□□ -0.51
TCF7-223	ENST00000522653	TBCA	O75347	108 aa	Known RBP	11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	LDHB	P07195	334 aa	Known RBP	11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	HOXD10	P28358	340 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	SNX16	P57768	344 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	PIK3C2G	O75747	1445 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	SSRP1	Q08945	709 aa	Known RBP	11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	RAPGEF6	Q8TEU7	1601 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	NLRP5	P59047	1200 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	FAM98C	Q17RN3	349 aa	Known RBP	11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	HS1BP3	Q53T59	392 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	FKBP15	Q5T1M5	1219 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	DDX12P	Q92771	950 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	ORC3	Q9UBD5	711 aa	Predicted RBP	11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	UGGT2	Q9NYU1	1516 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	FBXO3	Q9UK99	471 aa		11.88	□□□□□ -0.51
TCF7-223	ENST00000522653	KIF21A	Q7Z4S6	1674 aa		11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	PANK2	Q9BZ23	570 aa		11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	SEPT11	Q9NVA2	429 aa	Known RBP	11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	BIRC2	Q13490	618 aa		11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	MFSD6	Q6ZSS7	791 aa		11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	ERLIN1	O75477	346 aa		11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	IL15	P40933	162 aa	Predicted RBP	11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	FOSB	P53539	338 aa		11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	KMT5B	Q4FZB7	885 aa		11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	FIBP	O43427	364 aa		11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	TRAPPC8	Q9Y2L5	1435 aa		11.87	□□□□□ -0.51
TCF7-223	ENST00000522653	KLHL40	Q2TBA0	621 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	CDAN1	Q8IWY9	1227 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	SLC8A3	P57103	927 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	DLGAP5	Q15398	846 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	USHBP1	Q8N6Y0	703 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	CCDC191	Q8NCU4	936 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	ESR2	Q92731	530 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	NOB1	Q9ULX3	412 aa	Known RBP	11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	COMMD10	Q9Y6G5	202 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	TMCO3	Q6UWJ1	677 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	TAF4B	Q92750	862 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	BABAM1	Q9NWV8	329 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	SUPT20HL1	Q3ZLR7	823 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	WDR66	Q8TBY9	1149 aa		11.86	□□□□□ -0.51
TCF7-223	ENST00000522653	TMPO	P42166	694 aa	Known RBP	11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	SPDYE3	A6NKU9	549 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	PATL2	C9JE40	543 aa	Known RBP	11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	IFIT3	O14879	490 aa	Known RBP	11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	FAM114A1	Q8IWE2	563 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	SYCP3	Q8IZU3	236 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	GC	P02774	474 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	OSBP	P22059	807 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	FMNL3	Q8IVF7	1028 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	STK11IP	Q8N1F8	1099 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	PDILT	Q8N807	584 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	MAGI2	Q86UL8	1455 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	KIAA0754	O94854	1291 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	SLU7	O95391	586 aa	Known RBP	11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	VIM	P08670	466 aa	Known RBP	11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	SKAP1	Q86WV1	359 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	PLCD3	Q8N3E9	789 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	TBC1D32	Q96NH3	1257 aa		11.85	□□□□□ -0.51
TCF7-223	ENST00000522653	THRAP3	Q9Y2W1	955 aa	Known RBP	11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 10 ms