RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 ABCC4O15439 1325 aa8.64□□□□□ -1.03
SPIDR-218ENST00000522222 LTBP3Q9NS15 1303 aa8.64□□□□□ -1.03
SPIDR-218ENST00000522222 LRRC37AA6NMS7 1700 aa8.64□□□□□ -1.03
SPIDR-218ENST00000522222 IGKV5-2P06315 115 aa8.64□□□□□ -1.03
SPIDR-218ENST00000522222 FKBP5Q13451 457 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-218ENST00000522222 RTL5Q5HYW3 569 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-218ENST00000522222 SOGA3Q5TF21 947 aa8.64□□□□□ -1.03
SPIDR-218ENST00000522222 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-218ENST00000522222 RBM17Q96I25 401 aaKnown RBP8.64□□□□□ -1.03
SPIDR-218ENST00000522222 NLRP3Q96P20 1036 aa8.64□□□□□ -1.03
SPIDR-218ENST00000522222 TAOK3Q9H2K8 898 aa8.64□□□□□ -1.03
SPIDR-218ENST00000522222 CWC25Q9NXE8 425 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-218ENST00000522222 IRS4O14654 1257 aaPredicted RBP8.63□□□□□ -1.03
SPIDR-218ENST00000522222 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
SPIDR-218ENST00000522222 PCCAP05165 728 aaPredicted RBP8.63□□□□□ -1.03
SPIDR-218ENST00000522222 LMNB1P20700 586 aa8.63□□□□□ -1.03
SPIDR-218ENST00000522222 ALDH1B1P30837 517 aa8.63□□□□□ -1.03
SPIDR-218ENST00000522222 ANP32AP39687 249 aaKnown RBP8.63□□□□□ -1.03
SPIDR-218ENST00000522222 RRP1P56182 461 aaKnown RBP8.63□□□□□ -1.03
SPIDR-218ENST00000522222 CWF19L2Q2TBE0 894 aaKnown RBP8.63□□□□□ -1.03
SPIDR-218ENST00000522222 B4GALNT3Q6L9W6 998 aa8.63□□□□□ -1.03
SPIDR-218ENST00000522222 ZBTB38Q8NAP3 1195 aaPredicted RBP8.63□□□□□ -1.03
SPIDR-218ENST00000522222 CCDC191Q8NCU4 936 aa8.63□□□□□ -1.03
SPIDR-218ENST00000522222 CRAMP1Q96RY5 1269 aa8.63□□□□□ -1.03
SPIDR-218ENST00000522222 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
SPIDR-218ENST00000522222 CCDC88AQ3V6T2 1871 aa8.62□□□□□ -1.03
SPIDR-218ENST00000522222 NEURL1BA8MQ27 555 aa8.62□□□□□ -1.03
SPIDR-218ENST00000522222 F6X3S4 739 aa8.62□□□□□ -1.03
SPIDR-218ENST00000522222 NEXNQ0ZGT2 675 aa8.62□□□□□ -1.03
SPIDR-218ENST00000522222 TRMT2AQ8IZ69 625 aaKnown RBP8.62□□□□□ -1.03
SPIDR-218ENST00000522222 DNAAF4Q8WXU2 420 aa8.62□□□□□ -1.03
SPIDR-218ENST00000522222 JARID2Q92833 1246 aaPredicted RBP8.62□□□□□ -1.03
SPIDR-218ENST00000522222 TAF1P21675 1872 aa8.62□□□□□ -1.03
SPIDR-218ENST00000522222 DUOX1Q9NRD9 1551 aa8.61□□□□□ -1.03
SPIDR-218ENST00000522222 CDHR2Q9BYE9 1310 aa8.61□□□□□ -1.03
SPIDR-218ENST00000522222 ZC3H4Q9UPT8 1303 aaKnown RBP8.61□□□□□ -1.03
SPIDR-218ENST00000522222 MS4A1P11836 297 aa8.61□□□□□ -1.03
SPIDR-218ENST00000522222 FKBP4Q02790 459 aaKnown RBP eCLIP8.61□□□□□ -1.03
SPIDR-218ENST00000522222 GRAPQ13588 217 aa8.61□□□□□ -1.03
SPIDR-218ENST00000522222 SF3B3Q15393 1217 aaKnown RBP8.61□□□□□ -1.03
SPIDR-218ENST00000522222 DDX46Q7L014 1031 aaKnown RBP8.61□□□□□ -1.03
SPIDR-218ENST00000522222 GRAPLQ8TC17 118 aaPredicted RBP8.61□□□□□ -1.03
SPIDR-218ENST00000522222 SSH1Q8WYL5 1049 aa8.61□□□□□ -1.03
SPIDR-218ENST00000522222 BCL2L13Q9BXK5 485 aa8.61□□□□□ -1.03
SPIDR-218ENST00000522222 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
SPIDR-218ENST00000522222 ZNF277Q9NRM2 450 aaPredicted RBP8.61□□□□□ -1.03
SPIDR-218ENST00000522222 RCAN3Q9UKA8 241 aa8.61□□□□□ -1.03
SPIDR-218ENST00000522222 COL4A5P29400 1685 aa8.61□□□□□ -1.03
SPIDR-218ENST00000522222 MYH3P11055 1940 aa8.6□□□□□ -1.03
SPIDR-218ENST00000522222 LTBP1Q14766 1721 aa8.6□□□□□ -1.03
SPIDR-218ENST00000522222 CTSWP56202 376 aa8.6□□□□□ -1.03
SPIDR-218ENST00000522222 GCKRQ14397 625 aa8.6□□□□□ -1.03
SPIDR-218ENST00000522222 CC2D2BQ6DHV5 1058 aa8.6□□□□□ -1.03
SPIDR-218ENST00000522222 UBE3BQ7Z3V4 1068 aa8.6□□□□□ -1.03
SPIDR-218ENST00000522222 RTKN2Q8IZC4 609 aa8.6□□□□□ -1.03
SPIDR-218ENST00000522222 MRPL50Q8N5N7 158 aaKnown RBP8.6□□□□□ -1.03
SPIDR-218ENST00000522222 LINS1Q8NG48 757 aa8.6□□□□□ -1.03
SPIDR-218ENST00000522222 ATP6V0A2Q9Y487 856 aa8.6□□□□□ -1.03
SPIDR-218ENST00000522222 PDE8AO60658 829 aa8.59□□□□□ -1.03
SPIDR-218ENST00000522222 HSP90B1P14625 803 aaKnown RBP8.59□□□□□ -1.03
SPIDR-218ENST00000522222 CASP7P55210 303 aa8.59□□□□□ -1.03
SPIDR-218ENST00000522222 BEND3Q5T5X7 828 aa8.59□□□□□ -1.03
SPIDR-218ENST00000522222 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-218ENST00000522222 CELF1Q92879 486 aaKnown RBP8.59□□□□□ -1.03
SPIDR-218ENST00000522222 CCDC85AQ96PX6 553 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-218ENST00000522222 PSMD1Q99460 953 aa8.59□□□□□ -1.03
SPIDR-218ENST00000522222 NMRK2Q9NPI5 230 aa8.59□□□□□ -1.03
SPIDR-218ENST00000522222 SMC4Q9NTJ3 1288 aa8.59□□□□□ -1.03
SPIDR-218ENST00000522222 SPEF2Q9C093 1822 aa8.59□□□□□ -1.03
SPIDR-218ENST00000522222 ZNF541Q9H0D2 1346 aa8.58□□□□□ -1.04
SPIDR-218ENST00000522222 WDR90Q96KV7 1748 aa8.58□□□□□ -1.04
SPIDR-218ENST00000522222 H7C1W4 665 aa8.58□□□□□ -1.04
SPIDR-218ENST00000522222 KIF3CO14782 793 aa8.58□□□□□ -1.04
SPIDR-218ENST00000522222 BBOX1O75936 387 aa8.58□□□□□ -1.04
SPIDR-218ENST00000522222 CT47B1P0C2W7 299 aaPredicted RBP8.58□□□□□ -1.04
SPIDR-218ENST00000522222 IARSP41252 1262 aaKnown RBP8.58□□□□□ -1.04
SPIDR-218ENST00000522222 CCDC152Q4G0S7 254 aa8.58□□□□□ -1.04
SPIDR-218ENST00000522222 SLC4A10Q6U841 1118 aa8.58□□□□□ -1.04
SPIDR-218ENST00000522222 SEC31BQ9NQW1 1179 aa8.58□□□□□ -1.04
SPIDR-218ENST00000522222 NOP58Q9Y2X3 529 aaKnown RBP8.58□□□□□ -1.04
SPIDR-218ENST00000522222 RTL9Q8NET4 1388 aa8.58□□□□□ -1.04
SPIDR-218ENST00000522222 PTPRCP08575 1304 aa8.57□□□□□ -1.04
SPIDR-218ENST00000522222 KDM2BQ8NHM5 1336 aa8.57□□□□□ -1.04
SPIDR-218ENST00000522222 FAM161AQ3B820 660 aa8.57□□□□□ -1.04
SPIDR-218ENST00000522222 ALDH1L2Q3SY69 923 aa8.57□□□□□ -1.04
SPIDR-218ENST00000522222 GRIPAP1Q4V328 841 aa8.57□□□□□ -1.04
SPIDR-218ENST00000522222 DPP8Q6V1X1 898 aaPredicted RBP8.57□□□□□ -1.04
SPIDR-218ENST00000522222 TMC4Q7Z404 712 aa8.57□□□□□ -1.04
SPIDR-218ENST00000522222 SP8Q8IXZ3 490 aa8.57□□□□□ -1.04
SPIDR-218ENST00000522222 PLA2G12BQ9BX93 195 aa8.57□□□□□ -1.04
SPIDR-218ENST00000522222 GREM2Q9H772 168 aa8.57□□□□□ -1.04
SPIDR-218ENST00000522222 GLTPD2A6NH11 291 aa8.56□□□□□ -1.04
SPIDR-218ENST00000522222 GRM8O00222 908 aa8.56□□□□□ -1.04
SPIDR-218ENST00000522222 PPIP5K2O43314 1243 aa8.56□□□□□ -1.04
SPIDR-218ENST00000522222 ALDH1L1O75891 902 aa8.56□□□□□ -1.04
SPIDR-218ENST00000522222 RARSP54136 660 aaKnown RBP8.56□□□□□ -1.04
SPIDR-218ENST00000522222 RPS8P62241 208 aaKnown RBP8.56□□□□□ -1.04
SPIDR-218ENST00000522222 POLA2Q14181 598 aa8.56□□□□□ -1.04
SPIDR-218ENST00000522222 AOC3Q16853 763 aa8.56□□□□□ -1.04
SPIDR-218ENST00000522222 LARGE2Q8N3Y3 721 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms