RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PARP3Q9Y6F1 533 aa16.68■□□□□ 0.26
CLK4-210ENST00000522136 FAM161AQ3B820 660 aa16.67■□□□□ 0.26
CLK4-210ENST00000522136 SLC16A10Q8TF71 515 aa16.67■□□□□ 0.26
CLK4-210ENST00000522136 RFX5P48382 616 aaPredicted RBP16.66■□□□□ 0.26
CLK4-210ENST00000522136 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
CLK4-210ENST00000522136 GREM2Q9H772 168 aa16.66■□□□□ 0.26
CLK4-210ENST00000522136 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
CLK4-210ENST00000522136 DCTPP1Q9H773 170 aa16.66■□□□□ 0.26
CLK4-210ENST00000522136 EXOC6BQ9Y2D4 811 aa16.66■□□□□ 0.26
CLK4-210ENST00000522136 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
CLK4-210ENST00000522136 NRXN2Q9P2S2 1712 aa16.65■□□□□ 0.26
CLK4-210ENST00000522136 APBB1O00213 710 aa16.65■□□□□ 0.26
CLK4-210ENST00000522136 ST5P78524 1137 aa16.65■□□□□ 0.26
CLK4-210ENST00000522136 ZNF594Q96JF6 807 aaPredicted RBP16.65■□□□□ 0.26
CLK4-210ENST00000522136 SURF6O75683 361 aaKnown RBP16.64■□□□□ 0.25
CLK4-210ENST00000522136 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.25
CLK4-210ENST00000522136 SMC5Q8IY18 1101 aa16.64■□□□□ 0.25
CLK4-210ENST00000522136 NLRP3Q96P20 1036 aa16.64■□□□□ 0.25
CLK4-210ENST00000522136 TAF1P21675 1872 aa16.64■□□□□ 0.25
CLK4-210ENST00000522136 ITGA6P23229 1130 aa16.64■□□□□ 0.25
CLK4-210ENST00000522136 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.25
CLK4-210ENST00000522136 CCDC57Q2TAC2 916 aa16.64■□□□□ 0.25
CLK4-210ENST00000522136 SIL1Q9H173 461 aa16.64■□□□□ 0.25
CLK4-210ENST00000522136 SEC31BQ9NQW1 1179 aa16.64■□□□□ 0.25
CLK4-210ENST00000522136 IFIT5Q13325 482 aaKnown RBP16.63■□□□□ 0.25
CLK4-210ENST00000522136 SF3B3Q15393 1217 aaKnown RBP16.63■□□□□ 0.25
CLK4-210ENST00000522136 SKAP1Q86WV1 359 aa16.63■□□□□ 0.25
CLK4-210ENST00000522136 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
CLK4-210ENST00000522136 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
CLK4-210ENST00000522136 GCC1Q96CN9 775 aa16.62■□□□□ 0.25
CLK4-210ENST00000522136 MTFR1LQ9H019 292 aa16.62■□□□□ 0.25
CLK4-210ENST00000522136 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
CLK4-210ENST00000522136 COL4A1P02462 1669 aa16.61■□□□□ 0.25
CLK4-210ENST00000522136 ANKRD18BA2A2Z9 1011 aa16.61■□□□□ 0.25
CLK4-210ENST00000522136 PUS3Q9BZE2 481 aaKnown RBP16.61■□□□□ 0.25
CLK4-210ENST00000522136 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
CLK4-210ENST00000522136 NOP58Q9Y2X3 529 aaKnown RBP16.61■□□□□ 0.25
CLK4-210ENST00000522136 ANKRD45Q5TZF3 282 aa16.6■□□□□ 0.25
CLK4-210ENST00000522136 PDZRN3Q9UPQ7 1066 aa16.6■□□□□ 0.25
CLK4-210ENST00000522136 SMARCA5O60264 1052 aaPredicted RBP16.6■□□□□ 0.25
CLK4-210ENST00000522136 LRRC24Q50LG9 513 aa16.6■□□□□ 0.25
CLK4-210ENST00000522136 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
CLK4-210ENST00000522136 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
CLK4-210ENST00000522136 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLK4-210ENST00000522136 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
CLK4-210ENST00000522136 RIC1Q4ADV7 1423 aa16.59■□□□□ 0.25
CLK4-210ENST00000522136 SPEF2Q9C093 1822 aa16.59■□□□□ 0.25
CLK4-210ENST00000522136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.58■□□□□ 0.25
CLK4-210ENST00000522136 RTL9Q8NET4 1388 aa16.58■□□□□ 0.25
CLK4-210ENST00000522136 NUCB1Q02818 461 aa16.58■□□□□ 0.24
CLK4-210ENST00000522136 CRY2Q49AN0 593 aa16.58■□□□□ 0.24
CLK4-210ENST00000522136 ATG9AQ7Z3C6 839 aa16.58■□□□□ 0.24
CLK4-210ENST00000522136 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
CLK4-210ENST00000522136 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
CLK4-210ENST00000522136 SASH1O94885 1247 aa16.57■□□□□ 0.24
CLK4-210ENST00000522136 CELF1Q92879 486 aaKnown RBP16.57■□□□□ 0.24
CLK4-210ENST00000522136 EYA2O00167 538 aa16.57■□□□□ 0.24
CLK4-210ENST00000522136 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
CLK4-210ENST00000522136 HSP90AB4PQ58FF6 505 aa16.57■□□□□ 0.24
CLK4-210ENST00000522136 LDHAL6AQ6ZMR3 332 aa16.57■□□□□ 0.24
CLK4-210ENST00000522136 DDX46Q7L014 1031 aaKnown RBP16.57■□□□□ 0.24
CLK4-210ENST00000522136 RHPN1Q8TCX5 695 aa16.57■□□□□ 0.24
CLK4-210ENST00000522136 RPGRQ92834 1020 aaKnown RBP16.57■□□□□ 0.24
CLK4-210ENST00000522136 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
CLK4-210ENST00000522136 POLD1P28340 1107 aa16.56■□□□□ 0.24
CLK4-210ENST00000522136 CHD1LQ86WJ1 897 aa16.56■□□□□ 0.24
CLK4-210ENST00000522136 C16orf71Q8IYS4 520 aaPredicted RBP16.56■□□□□ 0.24
CLK4-210ENST00000522136 SGIP1Q9BQI5 828 aa16.56■□□□□ 0.24
CLK4-210ENST00000522136 LRRCC1Q9C099 1032 aa16.56■□□□□ 0.24
CLK4-210ENST00000522136 PDE6BP35913 854 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 PTGER2P43116 358 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 ANKRD18AQ8IVF6 992 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 CDC5LQ99459 802 aaKnown RBP16.55■□□□□ 0.24
CLK4-210ENST00000522136 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 RIPOR2Q9Y4F9 1068 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 COL11A2P13942 1736 aaPredicted RBP16.55■□□□□ 0.24
CLK4-210ENST00000522136 SRGNP10124 158 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 IGHMBP2P38935 993 aaKnown RBP16.55■□□□□ 0.24
CLK4-210ENST00000522136 RPS8P62241 208 aaKnown RBP16.55■□□□□ 0.24
CLK4-210ENST00000522136 TFCP2Q12800 502 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 SLC51AQ86UW1 340 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 KIF1BPQ96EK5 621 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 MPHOSPH8Q99549 860 aa16.55■□□□□ 0.24
CLK4-210ENST00000522136 CIAO1O76071 339 aa16.54■□□□□ 0.24
CLK4-210ENST00000522136 PDE4AP27815 886 aa16.54■□□□□ 0.24
CLK4-210ENST00000522136 CHRNA5P30532 468 aa16.54■□□□□ 0.24
CLK4-210ENST00000522136 C2CD5Q86YS7 1000 aa16.54■□□□□ 0.24
CLK4-210ENST00000522136 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
CLK4-210ENST00000522136 C10orf71Q711Q0 1435 aa16.54■□□□□ 0.24
CLK4-210ENST00000522136 SOCS7O14512 581 aa16.53■□□□□ 0.24
CLK4-210ENST00000522136 IL15P40933 162 aaPredicted RBP16.53■□□□□ 0.24
CLK4-210ENST00000522136 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
CLK4-210ENST00000522136 LRP5O75197 1615 aa16.53■□□□□ 0.24
CLK4-210ENST00000522136 HOXA10P31260 410 aaPredicted RBP16.53■□□□□ 0.24
CLK4-210ENST00000522136 GRAPQ13588 217 aa16.53■□□□□ 0.24
CLK4-210ENST00000522136 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
CLK4-210ENST00000522136 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
CLK4-210ENST00000522136 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
CLK4-210ENST00000522136 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
CLK4-210ENST00000522136 NPR1P16066 1061 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms