RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 TSPYL4Q9UJ04 414 aa8.42□□□□□ -1.06
CTNNA1-228ENST00000521640 PDZRN3Q9UPQ7 1066 aa8.42□□□□□ -1.06
CTNNA1-228ENST00000521640 NOP58Q9Y2X3 529 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-228ENST00000521640 TNS3Q68CZ2 1445 aa8.42□□□□□ -1.06
CTNNA1-228ENST00000521640 PXDNQ92626 1479 aa8.42□□□□□ -1.06
CTNNA1-228ENST00000521640 XIRP1Q702N8 1843 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-228ENST00000521640 COL18A1P39060 1754 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 STRCQ7RTU9 1775 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 CPDO75976 1380 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 CLK2P49760 499 aaKnown RBP8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 DCTN1Q14203 1278 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 AKAP4Q5JQC9 854 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 LIAT1Q6ZQX7 453 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 ERICH6Q7L0X2 663 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 MCM10Q7L590 875 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 KRT28Q7Z3Y7 464 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 ORAI2Q96SN7 254 aa8.41□□□□□ -1.06
CTNNA1-228ENST00000521640 SIPA1L3O60292 1781 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 IBTKQ9P2D0 1353 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 CFAP99D6REC4 459 aa8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 JUNDP17535 347 aa8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 RGS3P49796 1198 aa8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 NUCB1Q02818 461 aa8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 TAF7Q15545 349 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 PLEKHO1Q53GL0 409 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 PRR7Q8TB68 274 aa8.4□□□□□ -1.06
CTNNA1-228ENST00000521640 PARP4Q9UKK3 1724 aaKnown RBP8.4□□□□□ -1.07
CTNNA1-228ENST00000521640 ATP10DQ9P241 1426 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 FOXO3O43524 673 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 LILRB3O75022 631 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 CCT4P50991 539 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 TUSC1Q2TAM9 212 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 RTL5Q5HYW3 569 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 CCDC30Q5VVM6 783 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 NBPF6Q5VWK0 638 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 RPAP2Q8IXW5 612 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 NBPF4Q96M43 638 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 STK31Q9BXU1 1019 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 ZBTB3Q9H5J0 574 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 RGPD2P0DJD1 1756 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 PKD1L3Q7Z443 1732 aa8.39□□□□□ -1.07
CTNNA1-228ENST00000521640 SLC19A1P41440 591 aa8.38□□□□□ -1.07
CTNNA1-228ENST00000521640 PRPF38BQ5VTL8 546 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-228ENST00000521640 NUTM2GQ5VZR2 741 aa8.38□□□□□ -1.07
CTNNA1-228ENST00000521640 IL17REQ8NFR9 667 aa8.38□□□□□ -1.07
CTNNA1-228ENST00000521640 UPF2Q9HAU5 1272 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-228ENST00000521640 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-228ENST00000521640 MRC1P22897 1456 aa8.38□□□□□ -1.07
CTNNA1-228ENST00000521640 SPATA31A3Q5VYP0 1347 aa8.37□□□□□ -1.07
CTNNA1-228ENST00000521640 CHD1LQ86WJ1 897 aa8.37□□□□□ -1.07
CTNNA1-228ENST00000521640 ANKRD44Q8N8A2 993 aa8.37□□□□□ -1.07
CTNNA1-228ENST00000521640 ANKRD24Q8TF21 1146 aa8.37□□□□□ -1.07
CTNNA1-228ENST00000521640 SCN11AQ9UI33 1791 aa8.37□□□□□ -1.07
CTNNA1-228ENST00000521640 NHSL1Q5SYE7 1610 aa8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 HEG1Q9ULI3 1381 aa8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 SPDYE5A6NIY4 337 aa8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 NUTM2BA6NNL0 878 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 NUTM2EB1AL46 878 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 BMP2KLQ5H9B9 411 aa8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 SKAP1Q86WV1 359 aa8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 NUTM2AQ8IVF1 878 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 ABCA3Q99758 1704 aa8.36□□□□□ -1.07
CTNNA1-228ENST00000521640 RGPD5Q99666 1765 aa8.35□□□□□ -1.07
CTNNA1-228ENST00000521640 HMMRO75330 724 aa8.35□□□□□ -1.07
CTNNA1-228ENST00000521640 C1orf141Q5JVX7 400 aa8.35□□□□□ -1.07
CTNNA1-228ENST00000521640 CCDC24Q8N4L8 307 aa8.35□□□□□ -1.07
CTNNA1-228ENST00000521640 LTV1Q96GA3 475 aaPredicted RBP8.35□□□□□ -1.07
CTNNA1-228ENST00000521640 DCTPP1Q9H773 170 aa8.35□□□□□ -1.07
CTNNA1-228ENST00000521640 SOS2Q07890 1332 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 GNAI3P08754 354 aa8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 EIF4A1P60842 406 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 TEFQ10587 303 aa8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 FLIIQ13045 1269 aa8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 KRT24Q2M2I5 525 aa8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 SPRYD7Q5W111 196 aa8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 PTCRAQ6ISU1 281 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 CEP85Q6P2H3 762 aa8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 ZNF530Q6P9A1 599 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 SIRT2Q8IXJ6 389 aa8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 TBC1D32Q96NH3 1257 aa8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
CTNNA1-228ENST00000521640 RNMTO43148 476 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-228ENST00000521640 HSP90AB1P08238 724 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-228ENST00000521640 HDGFL1Q5TGJ6 251 aa8.33□□□□□ -1.08
CTNNA1-228ENST00000521640 DESI1Q6ICB0 168 aa8.33□□□□□ -1.08
CTNNA1-228ENST00000521640 TSC1Q92574 1164 aa8.33□□□□□ -1.08
CTNNA1-228ENST00000521640 SPG7Q9UQ90 795 aa8.33□□□□□ -1.08
CTNNA1-228ENST00000521640 GNAI2P04899 355 aa8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 BECN1Q14457 450 aa8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 LYPD8Q6UX82 237 aa8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 TRIM67Q6ZTA4 783 aa8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 BRINP3Q76B58 766 aa8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 USHBP1Q8N6Y0 703 aa8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 RAPGEF4Q8WZA2 1011 aa8.32□□□□□ -1.08
CTNNA1-228ENST00000521640 LRRC59Q96AG4 307 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms