RNA–Protein interactions for RNA: ENST00000521163.5

HDAC2-210, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-210ENST00000521163 RBM17Q96I25 401 aaKnown RBP12.52□□□□□ -0.41
HDAC2-210ENST00000521163 RCAN3Q9UKA8 241 aa12.52□□□□□ -0.41
HDAC2-210ENST00000521163 UTYO14607 1347 aa12.52□□□□□ -0.41
HDAC2-210ENST00000521163 SBF1O95248 1867 aa12.52□□□□□ -0.41
HDAC2-210ENST00000521163 SNED1Q8TER0 1413 aa12.52□□□□□ -0.41
HDAC2-210ENST00000521163 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
HDAC2-210ENST00000521163 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
HDAC2-210ENST00000521163 SOGA3Q5TF21 947 aa12.51□□□□□ -0.41
HDAC2-210ENST00000521163 JARID2Q92833 1246 aaPredicted RBP12.51□□□□□ -0.41
HDAC2-210ENST00000521163 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
HDAC2-210ENST00000521163 C9orf78Q9NZ63 289 aaPredicted RBP12.51□□□□□ -0.41
HDAC2-210ENST00000521163 DDX46Q7L014 1031 aaKnown RBP12.5□□□□□ -0.41
HDAC2-210ENST00000521163 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
HDAC2-210ENST00000521163 DICER1Q9UPY3 1922 aaKnown RBP12.49□□□□□ -0.41
HDAC2-210ENST00000521163 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
HDAC2-210ENST00000521163 LTBP1Q14766 1721 aa12.49□□□□□ -0.41
HDAC2-210ENST00000521163 PPEF1O14829 653 aaPredicted RBP12.49□□□□□ -0.41
HDAC2-210ENST00000521163 GRAPQ13588 217 aa12.49□□□□□ -0.41
HDAC2-210ENST00000521163 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
HDAC2-210ENST00000521163 ZNF784Q8NCA9 323 aaPredicted RBP12.49□□□□□ -0.41
HDAC2-210ENST00000521163 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
HDAC2-210ENST00000521163 LTBP3Q9NS15 1303 aa12.48□□□□□ -0.41
HDAC2-210ENST00000521163 C21orf2O43822 256 aa12.48□□□□□ -0.41
HDAC2-210ENST00000521163 NBPF7P0C2Y1 421 aaPredicted RBP12.48□□□□□ -0.41
HDAC2-210ENST00000521163 CCDC93Q567U6 631 aa12.48□□□□□ -0.41
HDAC2-210ENST00000521163 TMC4Q7Z404 712 aa12.48□□□□□ -0.41
HDAC2-210ENST00000521163 TTLL11Q8NHH1 800 aa12.48□□□□□ -0.41
HDAC2-210ENST00000521163 USP44Q9H0E7 712 aa12.48□□□□□ -0.41
HDAC2-210ENST00000521163 TNNQ9UQP3 1299 aa12.48□□□□□ -0.41
HDAC2-210ENST00000521163 A0A1B0GUL6 1792 aa12.48□□□□□ -0.41
HDAC2-210ENST00000521163 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
HDAC2-210ENST00000521163 BBOX1O75936 387 aa12.47□□□□□ -0.41
HDAC2-210ENST00000521163 CSF1RP07333 972 aa12.47□□□□□ -0.41
HDAC2-210ENST00000521163 FOXO4P98177 505 aa12.47□□□□□ -0.41
HDAC2-210ENST00000521163 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
HDAC2-210ENST00000521163 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
HDAC2-210ENST00000521163 FTSJ3Q8IY81 847 aaKnown RBP12.47□□□□□ -0.41
HDAC2-210ENST00000521163 GREM2Q9H772 168 aa12.47□□□□□ -0.41
HDAC2-210ENST00000521163 ATP6V0A2Q9Y487 856 aa12.47□□□□□ -0.41
HDAC2-210ENST00000521163 DUOX1Q9NRD9 1551 aa12.47□□□□□ -0.41
HDAC2-210ENST00000521163 NFKBIEO00221 500 aa12.46□□□□□ -0.41
HDAC2-210ENST00000521163 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.41
HDAC2-210ENST00000521163 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
HDAC2-210ENST00000521163 EPHA10Q5JZY3 1008 aa12.46□□□□□ -0.41
HDAC2-210ENST00000521163 DZIP1LQ8IYY4 767 aaKnown RBP12.46□□□□□ -0.41
HDAC2-210ENST00000521163 TMEM57Q8N5G2 664 aa12.46□□□□□ -0.41
HDAC2-210ENST00000521163 CELF1Q92879 486 aaKnown RBP12.46□□□□□ -0.41
HDAC2-210ENST00000521163 CLUAP1Q96AJ1 413 aa12.46□□□□□ -0.41
HDAC2-210ENST00000521163 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
HDAC2-210ENST00000521163 SUCLG2Q96I99 432 aa12.46□□□□□ -0.41
HDAC2-210ENST00000521163 CDC5LQ99459 802 aaKnown RBP12.46□□□□□ -0.41
HDAC2-210ENST00000521163 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
HDAC2-210ENST00000521163 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
HDAC2-210ENST00000521163 UBTFL1P0CB47 393 aaPredicted RBP12.45□□□□□ -0.42
HDAC2-210ENST00000521163 MS4A1P11836 297 aa12.45□□□□□ -0.42
HDAC2-210ENST00000521163 RLBP1P12271 317 aa12.45□□□□□ -0.42
HDAC2-210ENST00000521163 ARHGAP27Q6ZUM4 889 aa12.45□□□□□ -0.42
HDAC2-210ENST00000521163 SP8Q8IXZ3 490 aa12.45□□□□□ -0.42
HDAC2-210ENST00000521163 RTKN2Q8IZC4 609 aa12.45□□□□□ -0.42
HDAC2-210ENST00000521163 CCDC85AQ96PX6 553 aaPredicted RBP12.45□□□□□ -0.42
HDAC2-210ENST00000521163 MEIS3Q99687 375 aa12.45□□□□□ -0.42
HDAC2-210ENST00000521163 TAOK3Q9H2K8 898 aa12.45□□□□□ -0.42
HDAC2-210ENST00000521163 ITGA6P23229 1130 aa12.44□□□□□ -0.42
HDAC2-210ENST00000521163 RPS8P62241 208 aaKnown RBP12.44□□□□□ -0.42
HDAC2-210ENST00000521163 RASSF7Q02833 373 aa12.44□□□□□ -0.42
HDAC2-210ENST00000521163 LMBR1LQ6UX01 489 aa12.44□□□□□ -0.42
HDAC2-210ENST00000521163 OLFM4Q6UX06 510 aa12.44□□□□□ -0.42
HDAC2-210ENST00000521163 SLC51AQ86UW1 340 aa12.44□□□□□ -0.42
HDAC2-210ENST00000521163 ANKRD18AQ8IVF6 992 aa12.44□□□□□ -0.42
HDAC2-210ENST00000521163 ANKRD44Q8N8A2 993 aa12.44□□□□□ -0.42
HDAC2-210ENST00000521163 PSMD1Q99460 953 aa12.44□□□□□ -0.42
HDAC2-210ENST00000521163 TMX4Q9H1E5 349 aaPredicted RBP12.44□□□□□ -0.42
HDAC2-210ENST00000521163 BICC1Q9H694 974 aaKnown RBP12.44□□□□□ -0.42
HDAC2-210ENST00000521163 HDAC5Q9UQL6 1122 aa12.44□□□□□ -0.42
HDAC2-210ENST00000521163 GNAI3P08754 354 aa12.43□□□□□ -0.42
HDAC2-210ENST00000521163 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDAC2-210ENST00000521163 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
HDAC2-210ENST00000521163 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
HDAC2-210ENST00000521163 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
HDAC2-210ENST00000521163 ANKRD18BA2A2Z9 1011 aa12.42□□□□□ -0.42
HDAC2-210ENST00000521163 LMNB1P20700 586 aa12.42□□□□□ -0.42
HDAC2-210ENST00000521163 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
HDAC2-210ENST00000521163 PANK1Q8TE04 598 aa12.42□□□□□ -0.42
HDAC2-210ENST00000521163 BSDC1Q9NW68 430 aaPredicted RBP12.42□□□□□ -0.42
HDAC2-210ENST00000521163 CHMP3Q9Y3E7 222 aa12.42□□□□□ -0.42
HDAC2-210ENST00000521163 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
HDAC2-210ENST00000521163 PRELPP51888 382 aa12.41□□□□□ -0.42
HDAC2-210ENST00000521163 PDE3AQ14432 1141 aa12.41□□□□□ -0.42
HDAC2-210ENST00000521163 CCDC57Q2TAC2 916 aa12.41□□□□□ -0.42
HDAC2-210ENST00000521163 RTFDC1Q9BY42 306 aaPredicted RBP12.41□□□□□ -0.42
HDAC2-210ENST00000521163 LRRFIP2Q9Y608 721 aaKnown RBP12.41□□□□□ -0.42
HDAC2-210ENST00000521163 PLIN1O60240 522 aa12.4□□□□□ -0.42
HDAC2-210ENST00000521163 MVPQ14764 893 aaKnown RBP12.4□□□□□ -0.42
HDAC2-210ENST00000521163 C9orf131Q5VYM1 1079 aa12.4□□□□□ -0.42
HDAC2-210ENST00000521163 DPP8Q6V1X1 898 aaPredicted RBP12.4□□□□□ -0.42
HDAC2-210ENST00000521163 MPNDQ8N594 471 aa12.4□□□□□ -0.42
HDAC2-210ENST00000521163 PODXL2Q9NZ53 605 aa12.4□□□□□ -0.42
HDAC2-210ENST00000521163 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
HDAC2-210ENST00000521163 COL4A5P29400 1685 aa12.4□□□□□ -0.42
HDAC2-210ENST00000521163 XDHP47989 1333 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms