RNA–Protein interactions for RNA: ENST00000520963.2

IGHV7-40-201, Transcript of immunoglobulin heavy variable 7-40 (pseudogene), humanhuman

BASIC

Gene IGHV7-40, Length 296 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV7-40-201ENST00000520963 NBPF5PQ86XG9 351 aaPredicted RBP9.87□□□□□ -0.83
IGHV7-40-201ENST00000520963 SYNE4Q8N205 404 aa9.87□□□□□ -0.83
IGHV7-40-201ENST00000520963 NRXN2Q9P2S2 1712 aa9.87□□□□□ -0.83
IGHV7-40-201ENST00000520963 SERPINB2P05120 415 aa9.86□□□□□ -0.83
IGHV7-40-201ENST00000520963 ERFEQ4G0M1 354 aa9.86□□□□□ -0.83
IGHV7-40-201ENST00000520963 PRR5LQ6MZQ0 368 aa9.86□□□□□ -0.83
IGHV7-40-201ENST00000520963 BICDL1Q6ZP65 573 aa9.86□□□□□ -0.83
IGHV7-40-201ENST00000520963 ABCC12Q96J65 1359 aa9.86□□□□□ -0.83
IGHV7-40-201ENST00000520963 DDX60Q8IY21 1712 aaKnown RBP9.85□□□□□ -0.83
IGHV7-40-201ENST00000520963 CIAO1O76071 339 aa9.85□□□□□ -0.83
IGHV7-40-201ENST00000520963 RTL5Q5HYW3 569 aaPredicted RBP9.85□□□□□ -0.83
IGHV7-40-201ENST00000520963 NUTM1Q86Y26 1132 aa9.85□□□□□ -0.83
IGHV7-40-201ENST00000520963 CNBD1Q8NA66 436 aa9.85□□□□□ -0.83
IGHV7-40-201ENST00000520963 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
IGHV7-40-201ENST00000520963 LRP5O75197 1615 aa9.85□□□□□ -0.83
IGHV7-40-201ENST00000520963 SURF6O75683 361 aaKnown RBP9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 HCLS1P14317 486 aaPredicted RBP9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 IFIT5Q13325 482 aaKnown RBP9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 CRY2Q49AN0 593 aa9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 CCDC152Q4G0S7 254 aa9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 ILDR2Q71H61 639 aa9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 CHD1LQ86WJ1 897 aa9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 ERC1Q8IUD2 1116 aa9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 KIF1BPQ96EK5 621 aa9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 NLRP3Q96P20 1036 aa9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 GREM2Q9H772 168 aa9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
IGHV7-40-201ENST00000520963 ANKRD18BA2A2Z9 1011 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 FAM177BA6PVY3 158 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 EYA2O00167 538 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 MMP10P09238 476 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 ITGA6P23229 1130 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 GTF2E1P29083 439 aaPredicted RBP9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 IL15P40933 162 aaPredicted RBP9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 ST5P78524 1137 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 CCDC57Q2TAC2 916 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 C3orf67Q6ZVT6 689 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 RHPN1Q8TCX5 695 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 BRIP1Q9BX63 1249 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 LRRCC1Q9C099 1032 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 PA2G4Q9UQ80 394 aaKnown RBP9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 EXOC6BQ9Y2D4 811 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 MYH3P11055 1940 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 CASZ1Q86V15 1759 aa9.83□□□□□ -0.84
IGHV7-40-201ENST00000520963 SASH1O94885 1247 aa9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 HOXA10P31260 410 aaPredicted RBP9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 G3BP1Q13283 466 aaKnown RBP eCLIP9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 C8orf34Q49A92 452 aa9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 ANKRD45Q5TZF3 282 aa9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 ATG9AQ7Z3C6 839 aa9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 GPR108Q9NPR9 543 aa9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 RIPOR2Q9Y4F9 1068 aa9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 PARP3Q9Y6F1 533 aa9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 SALL3Q9BXA9 1300 aa9.82□□□□□ -0.84
IGHV7-40-201ENST00000520963 SKAP1Q86WV1 359 aa9.81□□□□□ -0.84
IGHV7-40-201ENST00000520963 KLHDC4Q8TBB5 520 aa9.81□□□□□ -0.84
IGHV7-40-201ENST00000520963 CDC5LQ99459 802 aaKnown RBP9.81□□□□□ -0.84
IGHV7-40-201ENST00000520963 PDGFDQ9GZP0 370 aaPredicted RBP9.81□□□□□ -0.84
IGHV7-40-201ENST00000520963 MTFR1LQ9H019 292 aa9.81□□□□□ -0.84
IGHV7-40-201ENST00000520963 OSBPL3Q9H4L5 887 aa9.81□□□□□ -0.84
IGHV7-40-201ENST00000520963 CHMP3Q9Y3E7 222 aa9.81□□□□□ -0.84
IGHV7-40-201ENST00000520963 TNRC6CQ9HCJ0 1690 aaKnown RBP9.8□□□□□ -0.84
IGHV7-40-201ENST00000520963 DDRGK1Q96HY6 314 aa9.8□□□□□ -0.84
IGHV7-40-201ENST00000520963 CRAMP1Q96RY5 1269 aa9.8□□□□□ -0.84
IGHV7-40-201ENST00000520963 LNPKQ9C0E8 428 aa9.8□□□□□ -0.84
IGHV7-40-201ENST00000520963 BSDC1Q9NW68 430 aaPredicted RBP9.8□□□□□ -0.84
IGHV7-40-201ENST00000520963 PDE6BP35913 854 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 LRRC24Q50LG9 513 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 MSL1Q68DK7 614 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 LDHAL6AQ6ZMR3 332 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 CLASRPQ8N2M8 674 aaKnown RBP9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 VGLL2Q8N8G2 317 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 ZNF594Q96JF6 807 aaPredicted RBP9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 SGIP1Q9BQI5 828 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 PUS3Q9BZE2 481 aaKnown RBP9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 SEC31BQ9NQW1 1179 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 STAP2Q9UGK3 403 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 C10orf71Q711Q0 1435 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 AOX1Q06278 1338 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 MROH5Q6ZUA9 1318 aa9.79□□□□□ -0.84
IGHV7-40-201ENST00000520963 ZBTB22O15209 634 aa9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 NPHP1O15259 732 aa9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 SMARCA5O60264 1052 aaPredicted RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 SRGNP10124 158 aa9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 IGHMBP2P38935 993 aaKnown RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 RPS8P62241 208 aaKnown RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 OS9Q13438 667 aaPredicted RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 GRAPQ13588 217 aa9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 R3HDM1Q15032 1099 aaKnown RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 TAF7LQ5H9L4 462 aa9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 DDX46Q7L014 1031 aaKnown RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 TMC4Q7Z404 712 aa9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 ANKRD18AQ8IVF6 992 aa9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 GRAPLQ8TC17 118 aaPredicted RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 CELF1Q92879 486 aaKnown RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 EAF2Q96CJ1 260 aaPredicted RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 CCDC85AQ96PX6 553 aaPredicted RBP9.78□□□□□ -0.84
IGHV7-40-201ENST00000520963 SIL1Q9H173 461 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms