RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 TTLL11Q8NHH1 800 aa18.69■□□□□ 0.58
SREK1-209ENST00000520953 COL4A1P02462 1669 aa18.69■□□□□ 0.58
SREK1-209ENST00000520953 MYH3P11055 1940 aa18.68■□□□□ 0.58
SREK1-209ENST00000520953 CSF1RP07333 972 aa18.68■□□□□ 0.58
SREK1-209ENST00000520953 TM4SF1P30408 202 aa18.68■□□□□ 0.58
SREK1-209ENST00000520953 PTPN12Q05209 780 aaKnown RBP18.68■□□□□ 0.58
SREK1-209ENST00000520953 CHD1LQ86WJ1 897 aa18.68■□□□□ 0.58
SREK1-209ENST00000520953 CCDC125Q86Z20 511 aa18.68■□□□□ 0.58
SREK1-209ENST00000520953 OTUD7AQ8TE49 926 aaPredicted RBP18.68■□□□□ 0.58
SREK1-209ENST00000520953 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
SREK1-209ENST00000520953 PDE8AO60658 829 aa18.67■□□□□ 0.58
SREK1-209ENST00000520953 CASZ1Q86V15 1759 aa18.67■□□□□ 0.58
SREK1-209ENST00000520953 IL1RAPL2Q9NP60 686 aa18.66■□□□□ 0.58
SREK1-209ENST00000520953 LAMB2P55268 1798 aa18.66■□□□□ 0.58
SREK1-209ENST00000520953 TNRC6CQ9HCJ0 1690 aaKnown RBP18.66■□□□□ 0.58
SREK1-209ENST00000520953 GTF2E1P29083 439 aaPredicted RBP18.66■□□□□ 0.58
SREK1-209ENST00000520953 NOP58Q9Y2X3 529 aaKnown RBP18.66■□□□□ 0.58
SREK1-209ENST00000520953 POLRMTO00411 1230 aaKnown RBP18.65■□□□□ 0.58
SREK1-209ENST00000520953 HMGB2P26583 209 aaKnown RBP18.65■□□□□ 0.58
SREK1-209ENST00000520953 FLAD1Q8NFF5 587 aa18.65■□□□□ 0.58
SREK1-209ENST00000520953 PUS3Q9BZE2 481 aaKnown RBP18.65■□□□□ 0.58
SREK1-209ENST00000520953 SEC31BQ9NQW1 1179 aa18.65■□□□□ 0.58
SREK1-209ENST00000520953 SERPINB2P05120 415 aa18.65■□□□□ 0.58
SREK1-209ENST00000520953 PRR5LQ6MZQ0 368 aa18.65■□□□□ 0.58
SREK1-209ENST00000520953 COPRSQ9NQ92 184 aa18.65■□□□□ 0.58
SREK1-209ENST00000520953 GOLGB1Q14789 3259 aaKnown RBP18.64■□□□□ 0.58
SREK1-209ENST00000520953 SASH1O94885 1247 aa18.64■□□□□ 0.57
SREK1-209ENST00000520953 ITGA6P23229 1130 aa18.64■□□□□ 0.57
SREK1-209ENST00000520953 LRRC24Q50LG9 513 aa18.64■□□□□ 0.57
SREK1-209ENST00000520953 TPTE2Q6XPS3 522 aa18.64■□□□□ 0.57
SREK1-209ENST00000520953 TAF1P21675 1872 aa18.64■□□□□ 0.57
SREK1-209ENST00000520953 OS9Q13438 667 aaPredicted RBP18.64■□□□□ 0.57
SREK1-209ENST00000520953 QSER1Q2KHR3 1735 aa18.64■□□□□ 0.57
SREK1-209ENST00000520953 NYXQ9GZU5 481 aa18.64■□□□□ 0.57
SREK1-209ENST00000520953 MMP10P09238 476 aa18.63■□□□□ 0.57
SREK1-209ENST00000520953 CNBD1Q8NA66 436 aa18.63■□□□□ 0.57
SREK1-209ENST00000520953 RHPN1Q8TCX5 695 aa18.63■□□□□ 0.57
SREK1-209ENST00000520953 LRRCC1Q9C099 1032 aa18.63■□□□□ 0.57
SREK1-209ENST00000520953 NPHP1O15259 732 aa18.62■□□□□ 0.57
SREK1-209ENST00000520953 CCDC57Q2TAC2 916 aa18.62■□□□□ 0.57
SREK1-209ENST00000520953 SLC10A5Q5PT55 438 aa18.62■□□□□ 0.57
SREK1-209ENST00000520953 ATG9AQ7Z3C6 839 aa18.62■□□□□ 0.57
SREK1-209ENST00000520953 NLGN1Q8N2Q7 840 aa18.62■□□□□ 0.57
SREK1-209ENST00000520953 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.57
SREK1-209ENST00000520953 IFIT5Q13325 482 aaKnown RBP18.61■□□□□ 0.57
SREK1-209ENST00000520953 TSHZ3Q63HK5 1081 aa18.61■□□□□ 0.57
SREK1-209ENST00000520953 SLC51AQ86UW1 340 aa18.6■□□□□ 0.57
SREK1-209ENST00000520953 RAB11FIP3O75154 756 aa18.59■□□□□ 0.57
SREK1-209ENST00000520953 TFCP2Q12800 502 aa18.59■□□□□ 0.57
SREK1-209ENST00000520953 KIF1BPQ96EK5 621 aa18.59■□□□□ 0.57
SREK1-209ENST00000520953 SPEF2Q9C093 1822 aa18.59■□□□□ 0.57
SREK1-209ENST00000520953 ANKRD18BA2A2Z9 1011 aa18.59■□□□□ 0.57
SREK1-209ENST00000520953 EYA2O00167 538 aa18.58■□□□□ 0.57
SREK1-209ENST00000520953 SF3B3Q15393 1217 aaKnown RBP18.58■□□□□ 0.57
SREK1-209ENST00000520953 CCDC152Q4G0S7 254 aa18.58■□□□□ 0.57
SREK1-209ENST00000520953 TAF7LQ5H9L4 462 aa18.58■□□□□ 0.57
SREK1-209ENST00000520953 R3HDM1Q15032 1099 aaKnown RBP18.58■□□□□ 0.56
SREK1-209ENST00000520953 PLEKHM2Q8IWE5 1019 aa18.58■□□□□ 0.56
SREK1-209ENST00000520953 NLRP3Q96P20 1036 aa18.57■□□□□ 0.56
SREK1-209ENST00000520953 TLR7Q9NYK1 1049 aaKnown RBP18.57■□□□□ 0.56
SREK1-209ENST00000520953 NRXN2Q9P2S2 1712 aa18.57■□□□□ 0.56
SREK1-209ENST00000520953 ANKRD31Q8N7Z5 1873 aa18.57■□□□□ 0.56
SREK1-209ENST00000520953 SRCAPQ6ZRS2 3230 aa18.57■□□□□ 0.56
SREK1-209ENST00000520953 HSP90AB4PQ58FF6 505 aa18.57■□□□□ 0.56
SREK1-209ENST00000520953 CELF1Q92879 486 aaKnown RBP18.57■□□□□ 0.56
SREK1-209ENST00000520953 EAF2Q96CJ1 260 aaPredicted RBP18.57■□□□□ 0.56
SREK1-209ENST00000520953 RIC1Q4ADV7 1423 aa18.56■□□□□ 0.56
SREK1-209ENST00000520953 PSDA5PKW4 1024 aaPredicted RBP18.56■□□□□ 0.56
SREK1-209ENST00000520953 ZBTB47Q9UFB7 747 aaPredicted RBP18.56■□□□□ 0.56
SREK1-209ENST00000520953 LRP5O75197 1615 aa18.56■□□□□ 0.56
SREK1-209ENST00000520953 SALL3Q9BXA9 1300 aa18.56■□□□□ 0.56
SREK1-209ENST00000520953 ZBTB7AO95365 584 aa18.55■□□□□ 0.56
SREK1-209ENST00000520953 ST5P78524 1137 aa18.55■□□□□ 0.56
SREK1-209ENST00000520953 LDHAL6AQ6ZMR3 332 aa18.55■□□□□ 0.56
SREK1-209ENST00000520953 CCDC8Q9H0W5 538 aaPredicted RBP18.55■□□□□ 0.56
SREK1-209ENST00000520953 PARP3Q9Y6F1 533 aa18.55■□□□□ 0.56
SREK1-209ENST00000520953 RTL9Q8NET4 1388 aa18.55■□□□□ 0.56
SREK1-209ENST00000520953 RIPOR2Q9Y4F9 1068 aa18.55■□□□□ 0.56
SREK1-209ENST00000520953 HSP90B1P14625 803 aaKnown RBP18.54■□□□□ 0.56
SREK1-209ENST00000520953 AACSQ86V21 672 aa18.54■□□□□ 0.56
SREK1-209ENST00000520953 ERC1Q8IUD2 1116 aa18.54■□□□□ 0.56
SREK1-209ENST00000520953 HELBQ8NG08 1087 aaPredicted RBP18.54■□□□□ 0.56
SREK1-209ENST00000520953 CNNM1Q9NRU3 951 aa18.54■□□□□ 0.56
SREK1-209ENST00000520953 SNAP23O00161 211 aa18.54■□□□□ 0.56
SREK1-209ENST00000520953 CIAO1O76071 339 aa18.54■□□□□ 0.56
SREK1-209ENST00000520953 IL15P40933 162 aaPredicted RBP18.54■□□□□ 0.56
SREK1-209ENST00000520953 BACH2Q9BYV9 841 aa18.52■□□□□ 0.56
SREK1-209ENST00000520953 WTIPA6NIX2 430 aaPredicted RBP18.52■□□□□ 0.56
SREK1-209ENST00000520953 GSPT1P15170 499 aaKnown RBP18.52■□□□□ 0.56
SREK1-209ENST00000520953 PDE1AP54750 535 aa18.52■□□□□ 0.56
SREK1-209ENST00000520953 TNNI3KQ59H18 835 aa18.52■□□□□ 0.56
SREK1-209ENST00000520953 CLASRPQ8N2M8 674 aaKnown RBP18.52■□□□□ 0.56
SREK1-209ENST00000520953 ATF5Q9Y2D1 282 aaPredicted RBP18.52■□□□□ 0.56
SREK1-209ENST00000520953 FPGT-TNNI3KV9GXZ4 949 aa18.52■□□□□ 0.56
SREK1-209ENST00000520953 MX1P20591 662 aa18.51■□□□□ 0.55
SREK1-209ENST00000520953 TIMM10P62072 90 aa18.51■□□□□ 0.55
SREK1-209ENST00000520953 TAF5LO75529 589 aa18.51■□□□□ 0.55
SREK1-209ENST00000520953 CRY2Q49AN0 593 aa18.51■□□□□ 0.55
SREK1-209ENST00000520953 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
SREK1-209ENST00000520953 VGLL2Q8N8G2 317 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms