RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 TESK2Q96S53 571 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 INSM2Q96T92 566 aaPredicted RBP8.1□□□□□ -1.11
FAM49B-218ENST00000520887 PCDHB9Q9Y5E1 797 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 USP6P35125 1406 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 EDC4Q6P2E9 1401 aaKnown RBP8.1□□□□□ -1.11
FAM49B-218ENST00000520887 AKAP12Q02952 1782 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 DISP3Q9P2K9 1392 aa8.1□□□□□ -1.11
FAM49B-218ENST00000520887 SPATA31A3Q5VYP0 1347 aa8.09□□□□□ -1.11
FAM49B-218ENST00000520887 PXDNQ92626 1479 aa8.09□□□□□ -1.11
FAM49B-218ENST00000520887 LILRA1O75019 489 aa8.09□□□□□ -1.11
FAM49B-218ENST00000520887 ADH1AP07327 375 aa8.09□□□□□ -1.11
FAM49B-218ENST00000520887 ADD1P35611 737 aaKnown RBP8.09□□□□□ -1.11
FAM49B-218ENST00000520887 CTSOP43234 321 aaPredicted RBP8.09□□□□□ -1.11
FAM49B-218ENST00000520887 ZNF395Q9H8N7 513 aaPredicted RBP8.09□□□□□ -1.11
FAM49B-218ENST00000520887 PNPLA6Q8IY17 1366 aa8.09□□□□□ -1.12
FAM49B-218ENST00000520887 LORP23490 312 aaPredicted RBP8.08□□□□□ -1.12
FAM49B-218ENST00000520887 KCNH5Q8NCM2 988 aa8.08□□□□□ -1.12
FAM49B-218ENST00000520887 POLMQ9NP87 494 aaPredicted RBP8.08□□□□□ -1.12
FAM49B-218ENST00000520887 MON2Q7Z3U7 1717 aa8.08□□□□□ -1.12
FAM49B-218ENST00000520887 COL22A1Q8NFW1 1626 aaPredicted RBP8.07□□□□□ -1.12
FAM49B-218ENST00000520887 CGNL1Q0VF96 1302 aa8.07□□□□□ -1.12
FAM49B-218ENST00000520887 SOCS7O14512 581 aa8.07□□□□□ -1.12
FAM49B-218ENST00000520887 GIGYF1O75420 1035 aaPredicted RBP8.07□□□□□ -1.12
FAM49B-218ENST00000520887 PTGIRP43119 386 aa8.07□□□□□ -1.12
FAM49B-218ENST00000520887 DDX17Q92841 729 aaKnown RBP8.07□□□□□ -1.12
FAM49B-218ENST00000520887 COG3Q96JB2 828 aa8.07□□□□□ -1.12
FAM49B-218ENST00000520887 KNSTRNQ9Y448 316 aa8.07□□□□□ -1.12
FAM49B-218ENST00000520887 A0A1W2PP64 1363 aa8.07□□□□□ -1.12
FAM49B-218ENST00000520887 TRPM3Q9HCF6 1732 aaPredicted RBP8.06□□□□□ -1.12
FAM49B-218ENST00000520887 MED1Q15648 1581 aaPredicted RBP8.06□□□□□ -1.12
FAM49B-218ENST00000520887 MCCD1P59942 119 aaPredicted RBP8.06□□□□□ -1.12
FAM49B-218ENST00000520887 NR1H3Q13133 447 aa8.06□□□□□ -1.12
FAM49B-218ENST00000520887 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
FAM49B-218ENST00000520887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.06□□□□□ -1.12
FAM49B-218ENST00000520887 SLC12A5Q9H2X9 1139 aa8.06□□□□□ -1.12
FAM49B-218ENST00000520887 CYLDQ9NQC7 956 aa8.06□□□□□ -1.12
FAM49B-218ENST00000520887 KIF20BQ96Q89 1820 aa8.06□□□□□ -1.12
FAM49B-218ENST00000520887 TTC21BQ7Z4L5 1316 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 ALS2Q96Q42 1657 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 CPSF1Q10570 1443 aaKnown RBP8.05□□□□□ -1.12
FAM49B-218ENST00000520887 NSD3Q9BZ95 1437 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 ZBTB7CA1YPR0 619 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 APBB1O00213 710 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 ZNF772Q68DY9 489 aaPredicted RBP8.05□□□□□ -1.12
FAM49B-218ENST00000520887 CCDC155Q8N6L0 562 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 KDF1Q8NAX2 398 aaPredicted RBP8.05□□□□□ -1.12
FAM49B-218ENST00000520887 MTMR14Q8NCE2 650 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 ZNF592Q92610 1267 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 PRDM11Q9NQV5 511 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 SNRKQ9NRH2 765 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 ZNF330Q9Y3S2 320 aaPredicted RBP8.05□□□□□ -1.12
FAM49B-218ENST00000520887 NSD2O96028 1365 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 NRKQ7Z2Y5 1582 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 MYOM1P52179 1685 aa8.05□□□□□ -1.12
FAM49B-218ENST00000520887 SLC35F4A4IF30 521 aa8.04□□□□□ -1.12
FAM49B-218ENST00000520887 ADAMTS2O95450 1211 aa8.04□□□□□ -1.12
FAM49B-218ENST00000520887 RNF20Q5VTR2 975 aa8.04□□□□□ -1.12
FAM49B-218ENST00000520887 ERICH6Q7L0X2 663 aa8.04□□□□□ -1.12
FAM49B-218ENST00000520887 RNF217Q8TC41 542 aa8.04□□□□□ -1.12
FAM49B-218ENST00000520887 NGLY1Q96IV0 654 aa8.04□□□□□ -1.12
FAM49B-218ENST00000520887 C8orf37Q96NL8 207 aa8.04□□□□□ -1.12
FAM49B-218ENST00000520887 NDUFB9Q9Y6M9 179 aa8.04□□□□□ -1.12
FAM49B-218ENST00000520887 CCDC7Q96M83 1385 aa8.04□□□□□ -1.12
FAM49B-218ENST00000520887 KIF7Q2M1P5 1343 aa8.03□□□□□ -1.12
FAM49B-218ENST00000520887 PHRF1Q9P1Y6 1649 aaKnown RBP8.03□□□□□ -1.12
FAM49B-218ENST00000520887 MARF1Q9Y4F3 1742 aaKnown RBP8.03□□□□□ -1.12
FAM49B-218ENST00000520887 NUTM2GQ5VZR2 741 aa8.03□□□□□ -1.12
FAM49B-218ENST00000520887 GPR161Q8N6U8 529 aaKnown RBP8.03□□□□□ -1.12
FAM49B-218ENST00000520887 NANOS1Q8WY41 292 aaKnown RBP8.03□□□□□ -1.12
FAM49B-218ENST00000520887 CCDC9Q9Y3X0 531 aaKnown RBP8.03□□□□□ -1.12
FAM49B-218ENST00000520887 ABCA3Q99758 1704 aa8.03□□□□□ -1.12
FAM49B-218ENST00000520887 SMG6Q86US8 1419 aaKnown RBP8.03□□□□□ -1.12
FAM49B-218ENST00000520887 GPR37L1O60883 481 aa8.02□□□□□ -1.13
FAM49B-218ENST00000520887 FOXD4L5Q5VV16 416 aaPredicted RBP8.02□□□□□ -1.13
FAM49B-218ENST00000520887 COL14A1Q05707 1796 aaKnown RBP8.02□□□□□ -1.13
FAM49B-218ENST00000520887 PIK3C2AO00443 1686 aa8.02□□□□□ -1.13
FAM49B-218ENST00000520887 ATP5J2-PTCD1G3V325 749 aa8.01□□□□□ -1.13
FAM49B-218ENST00000520887 ITGA6P23229 1130 aa8.01□□□□□ -1.13
FAM49B-218ENST00000520887 EVA1CP58658 441 aa8.01□□□□□ -1.13
FAM49B-218ENST00000520887 LYSMD3Q7Z3D4 306 aa8.01□□□□□ -1.13
FAM49B-218ENST00000520887 PANK3Q9H999 370 aa8.01□□□□□ -1.13
FAM49B-218ENST00000520887 USP19O94966 1318 aa8.01□□□□□ -1.13
FAM49B-218ENST00000520887 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 USP31Q70CQ4 1352 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 SLIT3O75094 1523 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 ABCC6O95255 1503 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 USP54Q70EL1 1684 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 GCP02774 474 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 CSB-PGBD3P0DP91 1061 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 AMPHP49418 695 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 RNF144AP50876 292 aaPredicted RBP8□□□□□ -1.13
FAM49B-218ENST00000520887 ZC3H6P61129 1189 aaKnown RBP8□□□□□ -1.13
FAM49B-218ENST00000520887 ERVK-9P63128 1117 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 FLIIQ13045 1269 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 NME9Q86XW9 330 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 VWA5B2Q8N398 1253 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 USP21Q9UK80 565 aa8□□□□□ -1.13
FAM49B-218ENST00000520887 TRPC5Q9UL62 973 aaPredicted RBP8□□□□□ -1.13
FAM49B-218ENST00000520887 NWD2Q9ULI1 1742 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms