RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 SUCLG2Q96I99 432 aa21.88■■□□□ 1.09
TRAM1-203ENST00000520700 SRCAPQ6ZRS2 3230 aa21.87■■□□□ 1.09
TRAM1-203ENST00000520700 LAMB2P55268 1798 aa21.87■■□□□ 1.09
TRAM1-203ENST00000520700 DDX60Q8IY21 1712 aaKnown RBP21.87■■□□□ 1.09
TRAM1-203ENST00000520700 CHRNA5P30532 468 aa21.87■■□□□ 1.09
TRAM1-203ENST00000520700 ALDH1B1P30837 517 aa21.87■■□□□ 1.09
TRAM1-203ENST00000520700 CCDC152Q4G0S7 254 aa21.87■■□□□ 1.09
TRAM1-203ENST00000520700 KLHL34Q8N239 644 aa21.87■■□□□ 1.09
TRAM1-203ENST00000520700 CNKSR1Q969H4 720 aa21.87■■□□□ 1.09
TRAM1-203ENST00000520700 COG6Q9Y2V7 657 aa21.87■■□□□ 1.09
TRAM1-203ENST00000520700 KIAA1551Q9HCM1 1747 aa21.86■■□□□ 1.09
TRAM1-203ENST00000520700 EPHA10Q5JZY3 1008 aa21.86■■□□□ 1.09
TRAM1-203ENST00000520700 RPGRQ92834 1020 aaKnown RBP21.86■■□□□ 1.09
TRAM1-203ENST00000520700 RBM17Q96I25 401 aaKnown RBP21.86■■□□□ 1.09
TRAM1-203ENST00000520700 PIM2Q9P1W9 311 aa21.86■■□□□ 1.09
TRAM1-203ENST00000520700 TNRC6CQ9HCJ0 1690 aaKnown RBP21.85■■□□□ 1.09
TRAM1-203ENST00000520700 GNAI2P04899 355 aa21.84■■□□□ 1.09
TRAM1-203ENST00000520700 LMBR1LQ6UX01 489 aa21.84■■□□□ 1.09
TRAM1-203ENST00000520700 DDX46Q7L014 1031 aaKnown RBP21.84■■□□□ 1.09
TRAM1-203ENST00000520700 ANKRD44Q8N8A2 993 aa21.84■■□□□ 1.09
TRAM1-203ENST00000520700 ZBTB40Q9NUA8 1239 aa21.84■■□□□ 1.09
TRAM1-203ENST00000520700 BBOX1O75936 387 aa21.83■■□□□ 1.09
TRAM1-203ENST00000520700 MTX1Q13505 466 aa21.83■■□□□ 1.09
TRAM1-203ENST00000520700 TTLL6Q8N841 843 aa21.83■■□□□ 1.09
TRAM1-203ENST00000520700 ZNF622Q969S3 477 aaKnown RBP eCLIP21.83■■□□□ 1.09
TRAM1-203ENST00000520700 BICC1Q9H694 974 aaKnown RBP21.83■■□□□ 1.09
TRAM1-203ENST00000520700 LRRFIP2Q9Y608 721 aaKnown RBP21.82■■□□□ 1.08
TRAM1-203ENST00000520700 GRAPQ13588 217 aa21.81■■□□□ 1.08
TRAM1-203ENST00000520700 AAMPQ13685 434 aa21.81■■□□□ 1.08
TRAM1-203ENST00000520700 TMC4Q7Z404 712 aa21.81■■□□□ 1.08
TRAM1-203ENST00000520700 GRAPLQ8TC17 118 aaPredicted RBP21.81■■□□□ 1.08
TRAM1-203ENST00000520700 GREM2Q9H772 168 aa21.81■■□□□ 1.08
TRAM1-203ENST00000520700 DLEC1Q9Y238 1755 aa21.81■■□□□ 1.08
TRAM1-203ENST00000520700 DALRD3Q5D0E6 543 aaKnown RBP21.8■■□□□ 1.08
TRAM1-203ENST00000520700 C7orf43Q8WVR3 580 aa21.8■■□□□ 1.08
TRAM1-203ENST00000520700 COL11A2P13942 1736 aaPredicted RBP21.8■■□□□ 1.08
TRAM1-203ENST00000520700 MYH3P11055 1940 aa21.79■■□□□ 1.08
TRAM1-203ENST00000520700 RPS8P62241 208 aaKnown RBP21.79■■□□□ 1.08
TRAM1-203ENST00000520700 IFIT5Q13325 482 aaKnown RBP21.79■■□□□ 1.08
TRAM1-203ENST00000520700 CDC5LQ99459 802 aaKnown RBP21.79■■□□□ 1.08
TRAM1-203ENST00000520700 ANKRD18BA2A2Z9 1011 aa21.78■■□□□ 1.08
TRAM1-203ENST00000520700 ITGA6P23229 1130 aa21.78■■□□□ 1.08
TRAM1-203ENST00000520700 FAM161AQ3B820 660 aa21.78■■□□□ 1.08
TRAM1-203ENST00000520700 PRPF40BQ6NWY9 871 aaKnown RBP21.78■■□□□ 1.08
TRAM1-203ENST00000520700 SEC31BQ9NQW1 1179 aa21.78■■□□□ 1.08
TRAM1-203ENST00000520700 ATP8B2P98198 1209 aa21.77■■□□□ 1.08
TRAM1-203ENST00000520700 CCDC57Q2TAC2 916 aa21.77■■□□□ 1.08
TRAM1-203ENST00000520700 CC2D2BQ6DHV5 1058 aa21.77■■□□□ 1.08
TRAM1-203ENST00000520700 CELF1Q92879 486 aaKnown RBP21.77■■□□□ 1.08
TRAM1-203ENST00000520700 BRCA1P38398 1863 aaKnown RBP21.77■■□□□ 1.08
TRAM1-203ENST00000520700 GRIPAP1Q4V328 841 aa21.76■■□□□ 1.07
TRAM1-203ENST00000520700 ANKRD18AQ8IVF6 992 aa21.76■■□□□ 1.07
TRAM1-203ENST00000520700 RPAP2Q8IXW5 612 aaPredicted RBP21.76■■□□□ 1.07
TRAM1-203ENST00000520700 SP8Q8IXZ3 490 aa21.76■■□□□ 1.07
TRAM1-203ENST00000520700 CCDC85AQ96PX6 553 aaPredicted RBP21.76■■□□□ 1.07
TRAM1-203ENST00000520700 CRBNQ96SW2 442 aa21.76■■□□□ 1.07
TRAM1-203ENST00000520700 BSDC1Q9NW68 430 aaPredicted RBP21.76■■□□□ 1.07
TRAM1-203ENST00000520700 RFX5P48382 616 aaPredicted RBP21.75■■□□□ 1.07
TRAM1-203ENST00000520700 SOGA3Q5TF21 947 aa21.75■■□□□ 1.07
TRAM1-203ENST00000520700 ATP6V0A2Q9Y487 856 aa21.75■■□□□ 1.07
TRAM1-203ENST00000520700 FBXO3Q9UK99 471 aa21.74■■□□□ 1.07
TRAM1-203ENST00000520700 BCS1LQ9Y276 419 aa21.74■■□□□ 1.07
TRAM1-203ENST00000520700 CHMP3Q9Y3E7 222 aa21.74■■□□□ 1.07
TRAM1-203ENST00000520700 PPEF1O14829 653 aaPredicted RBP21.73■■□□□ 1.07
TRAM1-203ENST00000520700 IGHMBP2P38935 993 aaKnown RBP21.73■■□□□ 1.07
TRAM1-203ENST00000520700 POLA2Q14181 598 aa21.73■■□□□ 1.07
TRAM1-203ENST00000520700 CEP85Q6P2H3 762 aa21.73■■□□□ 1.07
TRAM1-203ENST00000520700 SSH3Q8TE77 659 aa21.73■■□□□ 1.07
TRAM1-203ENST00000520700 SLX4Q8IY92 1834 aa21.72■■□□□ 1.07
TRAM1-203ENST00000520700 PTPN12Q05209 780 aaKnown RBP21.72■■□□□ 1.07
TRAM1-203ENST00000520700 COPRSQ9NQ92 184 aa21.72■■□□□ 1.07
TRAM1-203ENST00000520700 SRGAP3O43295 1099 aa21.71■■□□□ 1.07
TRAM1-203ENST00000520700 C1orf115Q9H7X2 142 aa21.71■■□□□ 1.07
TRAM1-203ENST00000520700 PNMA6EA0A0J9YXQ4 647 aa21.7■■□□□ 1.06
TRAM1-203ENST00000520700 C21orf2O43822 256 aa21.7■■□□□ 1.06
TRAM1-203ENST00000520700 GRIN3BO60391 1043 aa21.7■■□□□ 1.06
TRAM1-203ENST00000520700 YBX3P16989 372 aaKnown RBP eCLIP21.7■■□□□ 1.067e-10■□□□□ 10.2
TRAM1-203ENST00000520700 RTKN2Q8IZC4 609 aa21.7■■□□□ 1.06
TRAM1-203ENST00000520700 MPHOSPH8Q99549 860 aa21.7■■□□□ 1.06
TRAM1-203ENST00000520700 TMX4Q9H1E5 349 aaPredicted RBP21.7■■□□□ 1.06
TRAM1-203ENST00000520700 CCDC93Q567U6 631 aa21.69■■□□□ 1.06
TRAM1-203ENST00000520700 TAF7LQ5H9L4 462 aa21.69■■□□□ 1.06
TRAM1-203ENST00000520700 LDHAL6AQ6ZMR3 332 aa21.69■■□□□ 1.06
TRAM1-203ENST00000520700 PODXL2Q9NZ53 605 aa21.69■■□□□ 1.06
TRAM1-203ENST00000520700 MINPP1Q9UNW1 487 aa21.69■■□□□ 1.06
TRAM1-203ENST00000520700 RIPOR2Q9Y4F9 1068 aa21.69■■□□□ 1.06
TRAM1-203ENST00000520700 SNED1Q8TER0 1413 aa21.69■■□□□ 1.06
TRAM1-203ENST00000520700 ARFGEF1Q9Y6D6 1849 aa21.69■■□□□ 1.06
TRAM1-203ENST00000520700 CIAO1O76071 339 aa21.68■■□□□ 1.06
TRAM1-203ENST00000520700 GPR162Q16538 588 aa21.68■■□□□ 1.06
TRAM1-203ENST00000520700 SIRT2Q8IXJ6 389 aa21.68■■□□□ 1.06
TRAM1-203ENST00000520700 EXOC6Q8TAG9 804 aa21.68■■□□□ 1.06
TRAM1-203ENST00000520700 ZNF594Q96JF6 807 aaPredicted RBP21.68■■□□□ 1.06
TRAM1-203ENST00000520700 COL4A1P02462 1669 aa21.68■■□□□ 1.06
TRAM1-203ENST00000520700 TAF1P21675 1872 aa21.67■■□□□ 1.06
TRAM1-203ENST00000520700 EYA2O00167 538 aa21.67■■□□□ 1.06
TRAM1-203ENST00000520700 NOP58Q9Y2X3 529 aaKnown RBP21.67■■□□□ 1.06
TRAM1-203ENST00000520700 LTBP3Q9NS15 1303 aa21.66■■□□□ 1.06
TRAM1-203ENST00000520700 HMMRO75330 724 aa21.66■■□□□ 1.06
TRAM1-203ENST00000520700 PSMD1Q99460 953 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms