RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 NLGN2Q8NFZ4 835 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
SPARC-202ENST00000520687 DIAPH3Q9NSV4 1193 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
SPARC-202ENST00000520687 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
SPARC-202ENST00000520687 TOGARAM1Q9Y4F4 1720 aa12.04□□□□□ -0.48
SPARC-202ENST00000520687 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
SPARC-202ENST00000520687 SASH1O94885 1247 aa12.04□□□□□ -0.48
SPARC-202ENST00000520687 CASP7P55210 303 aa12.04□□□□□ -0.48
SPARC-202ENST00000520687 TSHZ3Q63HK5 1081 aa12.04□□□□□ -0.48
SPARC-202ENST00000520687 NBPF10Q6P3W6 841 aaKnown RBP12.04□□□□□ -0.48
SPARC-202ENST00000520687 NBPF15Q8N660 670 aa12.04□□□□□ -0.48
SPARC-202ENST00000520687 SPRYD3Q8NCJ5 442 aa12.04□□□□□ -0.48
SPARC-202ENST00000520687 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
SPARC-202ENST00000520687 GPR108Q9NPR9 543 aa12.04□□□□□ -0.48
SPARC-202ENST00000520687 RFX7Q2KHR2 1363 aa12.03□□□□□ -0.48
SPARC-202ENST00000520687 BCL9O00512 1426 aa12.03□□□□□ -0.48
SPARC-202ENST00000520687 GOLGB1Q14789 3259 aaKnown RBP12.03□□□□□ -0.48
SPARC-202ENST00000520687 CD2BP2O95400 341 aaKnown RBP12.03□□□□□ -0.48
SPARC-202ENST00000520687 SNRKQ9NRH2 765 aa12.03□□□□□ -0.48
SPARC-202ENST00000520687 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
SPARC-202ENST00000520687 RFX5P48382 616 aaPredicted RBP12.02□□□□□ -0.49
SPARC-202ENST00000520687 NEK4P51957 841 aa12.02□□□□□ -0.49
SPARC-202ENST00000520687 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.49
SPARC-202ENST00000520687 TNPO1Q92973 898 aaKnown RBP12.02□□□□□ -0.49
SPARC-202ENST00000520687 PA2G4Q9UQ80 394 aaKnown RBP12.02□□□□□ -0.49
SPARC-202ENST00000520687 ITGB4P16144 1822 aa12.02□□□□□ -0.49
SPARC-202ENST00000520687 COL24A1Q17RW2 1714 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 EXOC5O00471 708 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 ATP5JP18859 108 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
SPARC-202ENST00000520687 CUL4AQ13619 759 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 HSP90AB3PQ58FF7 597 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 KCNB2Q92953 911 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
SPARC-202ENST00000520687 TM6SF1Q9BZW5 370 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 CIAO1O76071 339 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 TCIRG1Q13488 830 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 DDB1Q16531 1140 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 L1TD1Q5T7N2 865 aaKnown RBP12.01□□□□□ -0.49
SPARC-202ENST00000520687 KIF6Q6ZMV9 814 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 ISCA1Q9BUE6 129 aa12.01□□□□□ -0.49
SPARC-202ENST00000520687 LSG1Q9H089 658 aaKnown RBP12.01□□□□□ -0.49
SPARC-202ENST00000520687 TRAK2O60296 914 aa12□□□□□ -0.49
SPARC-202ENST00000520687 PTCD1O75127 700 aaKnown RBP12□□□□□ -0.49
SPARC-202ENST00000520687 PDIA4P13667 645 aaKnown RBP12□□□□□ -0.49
SPARC-202ENST00000520687 IL15P40933 162 aaPredicted RBP12□□□□□ -0.49
SPARC-202ENST00000520687 FOXO4P98177 505 aa12□□□□□ -0.49
SPARC-202ENST00000520687 EPHA10Q5JZY3 1008 aa12□□□□□ -0.49
SPARC-202ENST00000520687 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
SPARC-202ENST00000520687 A1BGP04217 495 aa11.99□□□□□ -0.49
SPARC-202ENST00000520687 TNNI3KQ59H18 835 aa11.99□□□□□ -0.49
SPARC-202ENST00000520687 PIGBQ92521 554 aa11.99□□□□□ -0.49
SPARC-202ENST00000520687 PLA2G12BQ9BX93 195 aa11.99□□□□□ -0.49
SPARC-202ENST00000520687 FPGT-TNNI3KV9GXZ4 949 aa11.99□□□□□ -0.49
SPARC-202ENST00000520687 ATP5J2-PTCD1G3V325 749 aa11.98□□□□□ -0.49
SPARC-202ENST00000520687 CYP2E1P05181 493 aaPredicted RBP11.98□□□□□ -0.49
SPARC-202ENST00000520687 ZKSCAN1P17029 563 aaPredicted RBP11.98□□□□□ -0.49
SPARC-202ENST00000520687 RNF20Q5VTR2 975 aa11.98□□□□□ -0.49
SPARC-202ENST00000520687 LMBR1LQ6UX01 489 aa11.98□□□□□ -0.49
SPARC-202ENST00000520687 TTLL7Q6ZT98 887 aa11.98□□□□□ -0.49
SPARC-202ENST00000520687 TMX3Q96JJ7 454 aa11.98□□□□□ -0.49
SPARC-202ENST00000520687 ARFGEF2Q9Y6D5 1785 aa11.98□□□□□ -0.49
SPARC-202ENST00000520687 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
SPARC-202ENST00000520687 HSPA1AP0DMV8 641 aaKnown RBP11.97□□□□□ -0.49
SPARC-202ENST00000520687 HSPA1BP0DMV9 641 aaKnown RBP11.97□□□□□ -0.49
SPARC-202ENST00000520687 CWC27Q6UX04 472 aaKnown RBP11.97□□□□□ -0.49
SPARC-202ENST00000520687 ZSCAN31Q96LW9 406 aaPredicted RBP11.97□□□□□ -0.49
SPARC-202ENST00000520687 CCDC8Q9H0W5 538 aaPredicted RBP11.97□□□□□ -0.49
SPARC-202ENST00000520687 SIL1Q9H173 461 aa11.97□□□□□ -0.49
SPARC-202ENST00000520687 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
SPARC-202ENST00000520687 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
SPARC-202ENST00000520687 MAP4K4O95819 1239 aaPredicted RBP11.96□□□□□ -0.49
SPARC-202ENST00000520687 PSMA5P28066 241 aa11.96□□□□□ -0.49
SPARC-202ENST00000520687 LRRFIP1Q32MZ4 808 aaKnown RBP11.96□□□□□ -0.49
SPARC-202ENST00000520687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.96□□□□□ -0.49
SPARC-202ENST00000520687 HMG20BQ9P0W2 317 aa11.96□□□□□ -0.49
SPARC-202ENST00000520687 PALD1Q9ULE6 856 aa11.96□□□□□ -0.49
SPARC-202ENST00000520687 AKAP2Q9Y2D5 859 aa11.96□□□□□ -0.49
SPARC-202ENST00000520687 SNX14Q9Y5W7 946 aa11.96□□□□□ -0.49
SPARC-202ENST00000520687 DOT1LQ8TEK3 1739 aa11.96□□□□□ -0.49
SPARC-202ENST00000520687 CCDC171Q6TFL3 1326 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 MAP3K15Q6ZN16 1313 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 CDHR2Q9BYE9 1310 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 EYA2O00167 538 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 TFCP2Q12800 502 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 VPS53Q5VIR6 699 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 GIGYF2Q6Y7W6 1299 aaKnown RBP11.96□□□□□ -0.5
SPARC-202ENST00000520687 ZBTB38Q8NAP3 1195 aaPredicted RBP11.96□□□□□ -0.5
SPARC-202ENST00000520687 RBM46Q8TBY0 533 aaKnown RBP11.96□□□□□ -0.5
SPARC-202ENST00000520687 MAP4K1Q92918 833 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 AK7Q96M32 723 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 HAUS7Q99871 368 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 FSD1Q9BTV5 496 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 ALDH8A1Q9H2A2 487 aaPredicted RBP11.96□□□□□ -0.5
SPARC-202ENST00000520687 ASAP1Q9ULH1 1129 aa11.96□□□□□ -0.5
SPARC-202ENST00000520687 AFDNP55196 1824 aaKnown RBP11.96□□□□□ -0.5
SPARC-202ENST00000520687 BAG4O95429 457 aaKnown RBP11.95□□□□□ -0.5
SPARC-202ENST00000520687 HSP90B1P14625 803 aaKnown RBP11.95□□□□□ -0.5
SPARC-202ENST00000520687 PIP4K2AP48426 406 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms