RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 LMNB1P20700 586 aa10.56□□□□□ -0.72
CTNNA1-223ENST00000520520 NUCB2P80303 420 aa10.56□□□□□ -0.72
CTNNA1-223ENST00000520520 TBC1D9Q6ZT07 1266 aa10.56□□□□□ -0.72
CTNNA1-223ENST00000520520 RPAP2Q8IXW5 612 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-223ENST00000520520 TTLL6Q8N841 843 aa10.56□□□□□ -0.72
CTNNA1-223ENST00000520520 SPRYD3Q8NCJ5 442 aa10.56□□□□□ -0.72
CTNNA1-223ENST00000520520 GRPEL1Q9HAV7 217 aa10.56□□□□□ -0.72
CTNNA1-223ENST00000520520 BCL2L12Q9HB09 334 aa10.56□□□□□ -0.72
CTNNA1-223ENST00000520520 CCDC88AQ3V6T2 1871 aa10.55□□□□□ -0.72
CTNNA1-223ENST00000520520 H0YIN7 160 aa10.55□□□□□ -0.72
CTNNA1-223ENST00000520520 ST18O60284 1047 aa10.55□□□□□ -0.72
CTNNA1-223ENST00000520520 REC8O95072 547 aa10.55□□□□□ -0.72
CTNNA1-223ENST00000520520 PRELPP51888 382 aa10.55□□□□□ -0.72
CTNNA1-223ENST00000520520 TNPO1Q92973 898 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-223ENST00000520520 TBC1D2BQ9UPU7 963 aa10.55□□□□□ -0.72
CTNNA1-223ENST00000520520 C21orf2O43822 256 aa10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 CHRM1P11229 460 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 XRCC6P12956 609 aaKnown RBP eCLIP10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 VEGFAP15692 232 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 CLCN1P35523 988 aa10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 TTC22Q5TAA0 569 aa10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 TBC1D9BQ66K14 1250 aa10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 CLEC17AQ6ZS10 378 aa10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 TNS4Q8IZW8 715 aa10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 ANKRD44Q8N8A2 993 aa10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 CWC22Q9HCG8 908 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 MRC1P22897 1456 aa10.54□□□□□ -0.72
CTNNA1-223ENST00000520520 CACNA1SQ13698 1873 aa10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 DLEC1Q9Y238 1755 aa10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 GLTPD2A6NH11 291 aa10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 NFKBIEO00221 500 aa10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 STARD3NLO95772 234 aa10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 PIP4K2AP48426 406 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 TEFQ10587 303 aa10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 GZF1Q9H116 711 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 DCTPP1Q9H773 170 aa10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 NRXN2Q9P2S2 1712 aa10.53□□□□□ -0.72
CTNNA1-223ENST00000520520 RGL2O15211 777 aa10.52□□□□□ -0.73
CTNNA1-223ENST00000520520 MCCP23508 829 aa10.52□□□□□ -0.73
CTNNA1-223ENST00000520520 CCDC173Q0VFZ6 552 aa10.52□□□□□ -0.73
CTNNA1-223ENST00000520520 ERFEQ4G0M1 354 aa10.52□□□□□ -0.73
CTNNA1-223ENST00000520520 ZNF496Q96IT1 587 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-223ENST00000520520 PHACTR3Q96KR7 559 aa10.52□□□□□ -0.73
CTNNA1-223ENST00000520520 COL11A2P13942 1736 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 A0A087WZG4 1122 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 A1BGP04217 495 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 HSPA1AP0DMV8 641 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 HSPA1BP0DMV9 641 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 MCM2P49736 904 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 CCT4P50991 539 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 EVX2Q03828 476 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 KLHL40Q2TBA0 621 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 DPY19L2Q6NUT2 758 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 VSIG10Q8N0Z9 540 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 JMYQ8N9B5 988 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 UBR2Q8IWV8 1755 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 ANKRD31Q8N7Z5 1873 aa10.51□□□□□ -0.73
CTNNA1-223ENST00000520520 FAM177BA6PVY3 158 aa10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 GNAT3A8MTJ3 354 aa10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 PDE6BP35913 854 aa10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 EIF5P55010 431 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 PRR5LQ6MZQ0 368 aa10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 ZNF790Q6PG37 636 aa10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 POTEHQ6S545 545 aa10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 CNBD1Q8NA66 436 aa10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 RNF25Q96BH1 459 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 ZC3H4Q9UPT8 1303 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 SCN7AQ01118 1682 aa10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 HEG1Q9ULI3 1381 aa10.5□□□□□ -0.73
CTNNA1-223ENST00000520520 KCNQ3O43525 872 aa10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 PYGBP11216 843 aa10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 ST5P78524 1137 aa10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 PLEKHM2Q8IWE5 1019 aa10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 TSPYL6Q8N831 410 aa10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 C8orf58Q8NAV2 365 aa10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 IL17REQ8NFR9 667 aa10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 SETDB2Q96T68 719 aa10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 KIF2CQ99661 725 aa10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 THUMPD2Q9BTF0 503 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 MKRN1Q9UHC7 482 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-223ENST00000520520 BTBD11A6QL63 1104 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 POTECB2RU33 542 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 CHL1O00533 1208 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 ERC2O15083 957 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 DDNO94850 711 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 POTEIP0CG38 1075 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 POTEJP0CG39 1038 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 GLIPR1L2Q4G1C9 344 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 CEP85Q6P2H3 762 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 DZIP3Q86Y13 1208 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 SIRT2Q8IXJ6 389 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 GAS2L2Q8NHY3 880 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 RTF1Q92541 710 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 NAP1L5Q96NT1 182 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 BRIP1Q9BX63 1249 aa10.48□□□□□ -0.73
CTNNA1-223ENST00000520520 CHMP4AQ9BY43 222 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms