RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MAP2K2P36507 400 aa6.74□□□□□ -1.33
SDCBP-207ENST00000520168 NEUROD1Q13562 356 aa6.74□□□□□ -1.33
SDCBP-207ENST00000520168 EAPPQ56P03 285 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-207ENST00000520168 ZNF530Q6P9A1 599 aaPredicted RBP6.74□□□□□ -1.33
SDCBP-207ENST00000520168 VSIG10Q8N0Z9 540 aa6.74□□□□□ -1.33
SDCBP-207ENST00000520168 CNTROBQ8N137 903 aa6.74□□□□□ -1.33
SDCBP-207ENST00000520168 ZNF622Q969S3 477 aaKnown RBP eCLIP6.74□□□□□ -1.33
SDCBP-207ENST00000520168 CFAP44Q96MT7 982 aa6.74□□□□□ -1.33
SDCBP-207ENST00000520168 SIN3AQ96ST3 1273 aa6.74□□□□□ -1.33
SDCBP-207ENST00000520168 RABGEF1Q9UJ41 708 aa6.74□□□□□ -1.33
SDCBP-207ENST00000520168 EIF4A2Q14240 407 aaKnown RBP6.73□□□□□ -1.33
SDCBP-207ENST00000520168 PRPF38BQ5VTL8 546 aaKnown RBP6.73□□□□□ -1.33
SDCBP-207ENST00000520168 STYK1Q6J9G0 422 aa6.73□□□□□ -1.33
SDCBP-207ENST00000520168 NFATC2IPQ8NCF5 419 aa6.73□□□□□ -1.33
SDCBP-207ENST00000520168 CAPNS2Q96L46 248 aa6.73□□□□□ -1.33
SDCBP-207ENST00000520168 GPR101Q96P66 508 aaPredicted RBP6.73□□□□□ -1.33
SDCBP-207ENST00000520168 IRX2Q9BZI1 471 aaPredicted RBP6.73□□□□□ -1.33
SDCBP-207ENST00000520168 CYP19A1P11511 503 aaPredicted RBP6.72□□□□□ -1.33
SDCBP-207ENST00000520168 BRPF1P55201 1214 aaPredicted RBP6.72□□□□□ -1.33
SDCBP-207ENST00000520168 ST5P78524 1137 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 CCDC93Q567U6 631 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 PRPF40BQ6NWY9 871 aaKnown RBP6.72□□□□□ -1.33
SDCBP-207ENST00000520168 PAXIP1Q6ZW49 1069 aaPredicted RBP6.72□□□□□ -1.33
SDCBP-207ENST00000520168 GPC2Q8N158 579 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 ANKK1Q8NFD2 765 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 FBXW7Q969H0 707 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 GCC1Q96CN9 775 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 MASTLQ96GX5 879 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 HHIPL1Q96JK4 782 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 MCOLN1Q9GZU1 580 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 DDX21Q9NR30 783 aaKnown RBP eCLIP6.72□□□□□ -1.33
SDCBP-207ENST00000520168 POLKQ9UBT6 870 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 PCDHGA10Q9Y5H3 936 aa6.72□□□□□ -1.33
SDCBP-207ENST00000520168 NPHP1O15259 732 aa6.71□□□□□ -1.34
SDCBP-207ENST00000520168 LMOD1P29536 600 aaPredicted RBP6.71□□□□□ -1.34
SDCBP-207ENST00000520168 FKBP4Q02790 459 aaKnown RBP eCLIP6.71□□□□□ -1.34
SDCBP-207ENST00000520168 TYW1BQ6NUM6 668 aa6.71□□□□□ -1.34
SDCBP-207ENST00000520168 LAPTM4BQ86VI4 370 aa6.71□□□□□ -1.34
SDCBP-207ENST00000520168 DNAJC10Q8IXB1 793 aa6.71□□□□□ -1.34
SDCBP-207ENST00000520168 RTKN2Q8IZC4 609 aa6.71□□□□□ -1.34
SDCBP-207ENST00000520168 CNBD1Q8NA66 436 aa6.71□□□□□ -1.34
SDCBP-207ENST00000520168 SLC52A2Q9HAB3 445 aa6.71□□□□□ -1.34
SDCBP-207ENST00000520168 EMILIN3Q9NT22 766 aa6.71□□□□□ -1.34
SDCBP-207ENST00000520168 ZBTB1Q9Y2K1 713 aa6.71□□□□□ -1.34
SDCBP-207ENST00000520168 SIPA1L3O60292 1781 aaPredicted RBP6.71□□□□□ -1.34
SDCBP-207ENST00000520168 FZD9O00144 591 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 STARD3NLO95772 234 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 SRGNP10124 158 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 EIF5P55010 431 aaKnown RBP6.7□□□□□ -1.34
SDCBP-207ENST00000520168 DGKZQ13574 1117 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 AKAP4Q5JQC9 854 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 MAP1SQ66K74 1059 aaPredicted RBP6.7□□□□□ -1.34
SDCBP-207ENST00000520168 PRR5LQ6MZQ0 368 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 NPM2Q86SE8 214 aaKnown RBP6.7□□□□□ -1.34
SDCBP-207ENST00000520168 JDP2Q8WYK2 163 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 SETDB2Q96T68 719 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 TLL2Q9Y6L7 1015 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 RNF123Q5XPI4 1314 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 ZNF541Q9H0D2 1346 aa6.7□□□□□ -1.34
SDCBP-207ENST00000520168 MKI67P46013 3256 aaKnown RBP6.69□□□□□ -1.34
SDCBP-207ENST00000520168 COL9A1P20849 921 aa6.69□□□□□ -1.34
SDCBP-207ENST00000520168 PROX2Q3B8N5 592 aa6.69□□□□□ -1.34
SDCBP-207ENST00000520168 GRIPAP1Q4V328 841 aa6.69□□□□□ -1.34
SDCBP-207ENST00000520168 CYP4F22Q6NT55 531 aa6.69□□□□□ -1.34
SDCBP-207ENST00000520168 BICDL1Q6ZP65 573 aa6.69□□□□□ -1.34
SDCBP-207ENST00000520168 NYAP1Q6ZVC0 841 aa6.69□□□□□ -1.34
SDCBP-207ENST00000520168 USP50Q70EL3 339 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-207ENST00000520168 BBXQ8WY36 941 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-207ENST00000520168 TEX13AQ9BXU3 409 aaPredicted RBP6.69□□□□□ -1.34
SDCBP-207ENST00000520168 NPR1P16066 1061 aa6.68□□□□□ -1.34
SDCBP-207ENST00000520168 IL6STP40189 918 aaPredicted RBP6.68□□□□□ -1.34
SDCBP-207ENST00000520168 IARSP41252 1262 aaKnown RBP6.68□□□□□ -1.34
SDCBP-207ENST00000520168 EIF6P56537 245 aaKnown RBP6.68□□□□□ -1.34
SDCBP-207ENST00000520168 GRM1Q13255 1194 aa6.68□□□□□ -1.34
SDCBP-207ENST00000520168 TBC1D9BQ66K14 1250 aa6.68□□□□□ -1.34
SDCBP-207ENST00000520168 TTC5Q8N0Z6 440 aa6.68□□□□□ -1.34
SDCBP-207ENST00000520168 C7orf43Q8WVR3 580 aa6.68□□□□□ -1.34
SDCBP-207ENST00000520168 PSMD1Q99460 953 aa6.68□□□□□ -1.34
SDCBP-207ENST00000520168 CARD14Q9BXL6 1004 aa6.68□□□□□ -1.34
SDCBP-207ENST00000520168 SAGE1Q9NXZ1 904 aa6.68□□□□□ -1.34
SDCBP-207ENST00000520168 CENPFP49454 3210 aa6.68□□□□□ -1.34
SDCBP-207ENST00000520168 SOWAHBA6NEL2 793 aa6.67□□□□□ -1.34
SDCBP-207ENST00000520168 CANXP27824 592 aaKnown RBP6.67□□□□□ -1.34
SDCBP-207ENST00000520168 ALDH1B1P30837 517 aa6.67□□□□□ -1.34
SDCBP-207ENST00000520168 NOGQ13253 232 aa6.67□□□□□ -1.34
SDCBP-207ENST00000520168 CC2D2BQ6DHV5 1058 aa6.67□□□□□ -1.34
SDCBP-207ENST00000520168 SAPCD2Q86UD0 394 aa6.67□□□□□ -1.34
SDCBP-207ENST00000520168 NBPF15Q8N660 670 aa6.67□□□□□ -1.34
SDCBP-207ENST00000520168 EPAS1Q99814 870 aa6.67□□□□□ -1.34
SDCBP-207ENST00000520168 KLRG2A4D1S0 409 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-207ENST00000520168 BCAMP50895 628 aa6.66□□□□□ -1.34
SDCBP-207ENST00000520168 CST9Q5W186 159 aa6.66□□□□□ -1.34
SDCBP-207ENST00000520168 CLEC4GQ6UXB4 293 aa6.66□□□□□ -1.34
SDCBP-207ENST00000520168 ZFRQ96KR1 1074 aaKnown RBP6.66□□□□□ -1.34
SDCBP-207ENST00000520168 ZNF277Q9NRM2 450 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-207ENST00000520168 KIAA1468Q9P260 1216 aa6.66□□□□□ -1.34
SDCBP-207ENST00000520168 TSKSQ9UJT2 592 aa6.66□□□□□ -1.34
SDCBP-207ENST00000520168 ZNF652Q9Y2D9 606 aa6.66□□□□□ -1.34
SDCBP-207ENST00000520168 CDHR2Q9BYE9 1310 aa6.66□□□□□ -1.34
SDCBP-207ENST00000520168 SNED1Q8TER0 1413 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms