RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 PNMA1Q8ND90 353 aa6.49□□□□□ -1.37
SDC2-204ENST00000519914 RNF217Q8TC41 542 aa6.49□□□□□ -1.37
SDC2-204ENST00000519914 MYH16Q9H6N6 1097 aa6.49□□□□□ -1.37
SDC2-204ENST00000519914 GPSM3Q9Y4H4 160 aa6.49□□□□□ -1.37
SDC2-204ENST00000519914 C3P01024 1663 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 TOPAZ1Q8N9V7 1692 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 FYB1O15117 783 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 BCAR3O75815 825 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 ADH1AP07327 375 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 GSK3AP49840 483 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 BRPF1P55201 1214 aaPredicted RBP6.48□□□□□ -1.37
SDC2-204ENST00000519914 ZNF385CQ66K41 422 aaPredicted RBP6.48□□□□□ -1.37
SDC2-204ENST00000519914 TMEM151AQ8N4L1 468 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 CLUAP1Q96AJ1 413 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 PNNQ9H307 717 aaKnown RBP6.48□□□□□ -1.37
SDC2-204ENST00000519914 CYLDQ9NQC7 956 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 USP35Q9P2H5 1018 aa6.48□□□□□ -1.37
SDC2-204ENST00000519914 EDC4Q6P2E9 1401 aaKnown RBP6.47□□□□□ -1.37
SDC2-204ENST00000519914 NRKQ7Z2Y5 1582 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 MAPK8IP3Q9UPT6 1336 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 UBR1Q8IWV7 1749 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 CDK12Q9NYV4 1490 aaPredicted RBP6.47□□□□□ -1.37
SDC2-204ENST00000519914 LILRA1O75019 489 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 GDF11O95390 407 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 RHOQP17081 205 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 RFC5P40937 340 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 PTGIRP43119 386 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 RASSF7Q02833 373 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 PRICKLE2Q7Z3G6 844 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.47□□□□□ -1.37
SDC2-204ENST00000519914 PMFBP1Q8TBY8 1022 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 PRAM1Q96QH2 718 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 ITSN1Q15811 1721 aa6.47□□□□□ -1.37
SDC2-204ENST00000519914 LRRC7Q96NW7 1537 aa6.46□□□□□ -1.38
SDC2-204ENST00000519914 NALCNQ8IZF0 1738 aa6.46□□□□□ -1.38
SDC2-204ENST00000519914 TMPOP42166 694 aaKnown RBP6.46□□□□□ -1.38
SDC2-204ENST00000519914 FAM69CQ0P6D2 419 aa6.46□□□□□ -1.38
SDC2-204ENST00000519914 FOXD4L5Q5VV16 416 aaPredicted RBP6.46□□□□□ -1.38
SDC2-204ENST00000519914 HDGFL2Q7Z4V5 671 aaPredicted RBP6.46□□□□□ -1.38
SDC2-204ENST00000519914 KDF1Q8NAX2 398 aaPredicted RBP6.46□□□□□ -1.38
SDC2-204ENST00000519914 ZNF428Q96B54 188 aa6.46□□□□□ -1.38
SDC2-204ENST00000519914 RIMS1Q86UR5 1692 aaKnown RBP6.45□□□□□ -1.38
SDC2-204ENST00000519914 PPM1GO15355 546 aaPredicted RBP6.45□□□□□ -1.38
SDC2-204ENST00000519914 IGHDP01880 384 aa6.45□□□□□ -1.38
SDC2-204ENST00000519914 SRPK2P78362 688 aaKnown RBP6.45□□□□□ -1.38
SDC2-204ENST00000519914 GLIPR1L2Q4G1C9 344 aa6.45□□□□□ -1.38
SDC2-204ENST00000519914 LYSMD3Q7Z3D4 306 aa6.45□□□□□ -1.38
SDC2-204ENST00000519914 CDK19Q9BWU1 502 aa6.45□□□□□ -1.38
SDC2-204ENST00000519914 PCDHB9Q9Y5E1 797 aa6.45□□□□□ -1.38
SDC2-204ENST00000519914 DLG5Q8TDM6 1919 aa6.44□□□□□ -1.38
SDC2-204ENST00000519914 PIK3R4Q99570 1358 aa6.44□□□□□ -1.38
SDC2-204ENST00000519914 USP54Q70EL1 1684 aa6.44□□□□□ -1.38
SDC2-204ENST00000519914 GIGYF1O75420 1035 aaPredicted RBP6.44□□□□□ -1.38
SDC2-204ENST00000519914 U2AF1L5P0DN76 240 aaPredicted RBP6.44□□□□□ -1.38
SDC2-204ENST00000519914 IRS1P35568 1242 aa6.44□□□□□ -1.38
SDC2-204ENST00000519914 MARSP56192 900 aaKnown RBP6.44□□□□□ -1.38
SDC2-204ENST00000519914 U2AF1Q01081 240 aaKnown RBP eCLIP6.44□□□□□ -1.38
SDC2-204ENST00000519914 MVPQ14764 893 aaKnown RBP6.44□□□□□ -1.38
SDC2-204ENST00000519914 ALDH1L2Q3SY69 923 aa6.44□□□□□ -1.38
SDC2-204ENST00000519914 CYB5RLQ6IPT4 315 aa6.44□□□□□ -1.38
SDC2-204ENST00000519914 CUEDC1Q9NWM3 386 aaPredicted RBP6.44□□□□□ -1.38
SDC2-204ENST00000519914 POGKQ9P215 609 aa6.44□□□□□ -1.38
SDC2-204ENST00000519914 USP19O94966 1318 aa6.44□□□□□ -1.38
SDC2-204ENST00000519914 RGPD1P0DJD0 1748 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 SLIT1O75093 1534 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 ESPNB1AK53 854 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 MEN1O00255 615 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 WASLO00401 505 aaPredicted RBP6.43□□□□□ -1.38
SDC2-204ENST00000519914 DIAPH1O60610 1272 aaKnown RBP6.43□□□□□ -1.38
SDC2-204ENST00000519914 ADAMTS2O95450 1211 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 RLBP1P12271 317 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 HDAC1Q13547 482 aaPredicted RBP6.43□□□□□ -1.38
SDC2-204ENST00000519914 SUZ12Q15022 739 aaKnown RBP6.43□□□□□ -1.38
SDC2-204ENST00000519914 ZKSCAN2Q63HK3 967 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 LYPD4Q6UWN0 246 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 PANK1Q8TE04 598 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 PCMTD1Q96MG8 357 aaPredicted RBP6.43□□□□□ -1.38
SDC2-204ENST00000519914 TRIM34Q9BYJ4 488 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 GGNBP2Q9H3C7 697 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 DIP2AQ14689 1571 aa6.43□□□□□ -1.38
SDC2-204ENST00000519914 TNRQ92752 1358 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 PLEKHG1Q9ULL1 1385 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 PTCH1Q13635 1447 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 ADAMTS13Q76LX8 1427 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.42□□□□□ -1.38
SDC2-204ENST00000519914 ARHGAP23Q9P227 1491 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 RNF225M0QZC1 329 aaPredicted RBP6.42□□□□□ -1.38
SDC2-204ENST00000519914 SLURP2P0DP57 97 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 TNNT2P45379 298 aaPredicted RBP6.42□□□□□ -1.38
SDC2-204ENST00000519914 RIPOR1Q6ZS17 1223 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 IL27Q8NEV9 243 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 RWDD1Q9H446 243 aaPredicted RBP6.42□□□□□ -1.38
SDC2-204ENST00000519914 CABP1Q9NZU7 370 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 STK26Q9P289 416 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 POLKQ9UBT6 870 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 COG6Q9Y2V7 657 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 RRP7AQ9Y3A4 280 aaKnown RBP6.42□□□□□ -1.38
SDC2-204ENST00000519914 KIF16BQ96L93 1317 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 METP08581 1390 aa6.42□□□□□ -1.38
SDC2-204ENST00000519914 TMEM2Q9UHN6 1383 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 1891 ms