RNA–Protein interactions for RNA: ENST00000519788.6

SCUBE2-206, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-206ENST00000519788 CRY2Q49AN0 593 aa10.13□□□□□ -0.79
SCUBE2-206ENST00000519788 RTL5Q5HYW3 569 aaPredicted RBP10.13□□□□□ -0.79
SCUBE2-206ENST00000519788 SLC10A5Q5PT55 438 aa10.13□□□□□ -0.79
SCUBE2-206ENST00000519788 PRPF40BQ6NWY9 871 aaKnown RBP10.13□□□□□ -0.79
SCUBE2-206ENST00000519788 CNKSR1Q969H4 720 aa10.13□□□□□ -0.79
SCUBE2-206ENST00000519788 FAM89AQ96GI7 184 aa10.13□□□□□ -0.79
SCUBE2-206ENST00000519788 LAMB2P55268 1798 aa10.13□□□□□ -0.79
SCUBE2-206ENST00000519788 SH3TC1Q8TE82 1336 aa10.12□□□□□ -0.79
SCUBE2-206ENST00000519788 IGKV5-2P06315 115 aa10.12□□□□□ -0.79
SCUBE2-206ENST00000519788 FKBP5Q13451 457 aaPredicted RBP10.12□□□□□ -0.79
SCUBE2-206ENST00000519788 JARID2Q92833 1246 aaPredicted RBP10.12□□□□□ -0.79
SCUBE2-206ENST00000519788 NLRP3Q96P20 1036 aa10.12□□□□□ -0.79
SCUBE2-206ENST00000519788 RIC1Q4ADV7 1423 aa10.12□□□□□ -0.79
SCUBE2-206ENST00000519788 DDX60Q8IY21 1712 aaKnown RBP10.12□□□□□ -0.79
SCUBE2-206ENST00000519788 RNF123Q5XPI4 1314 aa10.11□□□□□ -0.79
SCUBE2-206ENST00000519788 HOXA10P31260 410 aaPredicted RBP10.11□□□□□ -0.79
SCUBE2-206ENST00000519788 OLFM4Q6UX06 510 aa10.11□□□□□ -0.79
SCUBE2-206ENST00000519788 REM2Q8IYK8 340 aaPredicted RBP10.11□□□□□ -0.79
SCUBE2-206ENST00000519788 CCDC191Q8NCU4 936 aa10.11□□□□□ -0.79
SCUBE2-206ENST00000519788 RPGRQ92834 1020 aaKnown RBP10.11□□□□□ -0.79
SCUBE2-206ENST00000519788 CWC25Q9NXE8 425 aaPredicted RBP10.11□□□□□ -0.79
SCUBE2-206ENST00000519788 F6X3S4 739 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 ALDH1B1P30837 517 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 RASSF7Q02833 373 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 NEXNQ0ZGT2 675 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 CWF19L2Q2TBE0 894 aaKnown RBP10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 MRPL50Q8N5N7 158 aaKnown RBP10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 ZBTB38Q8NAP3 1195 aaPredicted RBP10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 C7orf43Q8WVR3 580 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 DNAAF4Q8WXU2 420 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 SSH1Q8WYL5 1049 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 RBM17Q96I25 401 aaKnown RBP10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 BCL2L13Q9BXK5 485 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 SBF1O95248 1867 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 TAF1P21675 1872 aa10.1□□□□□ -0.79
SCUBE2-206ENST00000519788 NEURL1BA8MQ27 555 aa10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 NFKBIEO00221 500 aa10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 IRS4O14654 1257 aaPredicted RBP10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 PCCAP05165 728 aaPredicted RBP10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 PRELPP51888 382 aa10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 C9orf131Q5VYM1 1079 aa10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 SLC51AQ86UW1 340 aa10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 ZNF784Q8NCA9 323 aaPredicted RBP10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 CRAMP1Q96RY5 1269 aa10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 GTF3C3Q9Y5Q9 886 aa10.09□□□□□ -0.79
SCUBE2-206ENST00000519788 FER1L6Q2WGJ9 1857 aa10.08□□□□□ -0.8
SCUBE2-206ENST00000519788 CCDC88AQ3V6T2 1871 aa10.08□□□□□ -0.8
SCUBE2-206ENST00000519788 RNF181Q9P0P0 153 aa10.08□□□□□ -0.8
SCUBE2-206ENST00000519788 ABCC4O15439 1325 aa10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 PPEF1O14829 653 aaPredicted RBP10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 GCKRQ14397 625 aa10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 CCDC93Q567U6 631 aa10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 BEND3Q5T5X7 828 aa10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 DDX46Q7L014 1031 aaKnown RBP10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 UBE3BQ7Z3V4 1068 aa10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 LINS1Q8NG48 757 aa10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 ZNF526Q8TF50 670 aaPredicted RBP10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 SMC4Q9NTJ3 1288 aa10.07□□□□□ -0.8
SCUBE2-206ENST00000519788 COL4A1P02462 1669 aa10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 H7C1W4 665 aa10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 LMNB1P20700 586 aa10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 SF3B3Q15393 1217 aaKnown RBP10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 ALDH1L2Q3SY69 923 aa10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 SOGA3Q5TF21 947 aa10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 SLC4A10Q6U841 1118 aa10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 CCDC85AQ96PX6 553 aaPredicted RBP10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 TAOK3Q9H2K8 898 aa10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 ZBED9Q6R2W3 1325 aa10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 CDHR2Q9BYE9 1310 aa10.06□□□□□ -0.8
SCUBE2-206ENST00000519788 PDE8AO60658 829 aa10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 BBOX1O75936 387 aa10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 CT47B1P0C2W7 299 aaPredicted RBP10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 HSP90B1P14625 803 aaKnown RBP10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 RARSP54136 660 aaKnown RBP10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 GRAPQ13588 217 aa10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 RTKN2Q8IZC4 609 aa10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 GRAPLQ8TC17 118 aaPredicted RBP10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 ZNF277Q9NRM2 450 aaPredicted RBP10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 ATP6V0A2Q9Y487 856 aa10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 PTPRCP08575 1304 aa10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 LTBP3Q9NS15 1303 aa10.05□□□□□ -0.8
SCUBE2-206ENST00000519788 CASP7P55210 303 aa10.04□□□□□ -0.8
SCUBE2-206ENST00000519788 FKBP4Q02790 459 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCUBE2-206ENST00000519788 CELF1Q92879 486 aaKnown RBP10.04□□□□□ -0.8
SCUBE2-206ENST00000519788 SRCIN1Q9C0H9 1055 aa10.04□□□□□ -0.8
SCUBE2-206ENST00000519788 SEC31BQ9NQW1 1179 aa10.04□□□□□ -0.8
SCUBE2-206ENST00000519788 NOB1Q9ULX3 412 aaKnown RBP10.04□□□□□ -0.8
SCUBE2-206ENST00000519788 SNED1Q8TER0 1413 aa10.04□□□□□ -0.8
SCUBE2-206ENST00000519788 TIAM2Q8IVF5 1701 aa10.04□□□□□ -0.8
SCUBE2-206ENST00000519788 MYH3P11055 1940 aa10.03□□□□□ -0.8
SCUBE2-206ENST00000519788 DICER1Q9UPY3 1922 aaKnown RBP10.03□□□□□ -0.8
SCUBE2-206ENST00000519788 CTSWP56202 376 aa10.03□□□□□ -0.8
SCUBE2-206ENST00000519788 CCDC152Q4G0S7 254 aa10.03□□□□□ -0.8
SCUBE2-206ENST00000519788 CC2D2BQ6DHV5 1058 aa10.03□□□□□ -0.8
SCUBE2-206ENST00000519788 SP8Q8IXZ3 490 aa10.03□□□□□ -0.8
SCUBE2-206ENST00000519788 TTLL11Q8NHH1 800 aa10.03□□□□□ -0.8
SCUBE2-206ENST00000519788 GRM8O00222 908 aa10.02□□□□□ -0.81
SCUBE2-206ENST00000519788 BCAR3O75815 825 aa10.02□□□□□ -0.81
SCUBE2-206ENST00000519788 ALDH1L1O75891 902 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms