RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 CTSWP56202 376 aa12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 INTS5Q6P9B9 1019 aaKnown RBP12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 ZNF34Q8IZ26 560 aa12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 EAF2Q96CJ1 260 aaPredicted RBP12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 IL17RAQ96F46 866 aa12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 ANO2Q9NQ90 1003 aa12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 RTL9Q8NET4 1388 aa12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 LRP5O75197 1615 aa12.25□□□□□ -0.45
PDGFRB-205ENST00000519575 K7ELQ4 463 aaPredicted RBP12.24□□□□□ -0.45
PDGFRB-205ENST00000519575 SGSM2O43147 1006 aa12.24□□□□□ -0.45
PDGFRB-205ENST00000519575 HSPA1LP34931 641 aa12.24□□□□□ -0.45
PDGFRB-205ENST00000519575 TFCP2Q12800 502 aa12.24□□□□□ -0.45
PDGFRB-205ENST00000519575 TAF1LQ8IZX4 1826 aa12.24□□□□□ -0.45
PDGFRB-205ENST00000519575 UTP14AQ9BVJ6 771 aaKnown RBP12.24□□□□□ -0.45
PDGFRB-205ENST00000519575 IRS4O14654 1257 aaPredicted RBP12.23□□□□□ -0.45
PDGFRB-205ENST00000519575 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
PDGFRB-205ENST00000519575 FSD1Q9BTV5 496 aa12.23□□□□□ -0.45
PDGFRB-205ENST00000519575 NYXQ9GZU5 481 aa12.23□□□□□ -0.45
PDGFRB-205ENST00000519575 ARAP2Q8WZ64 1704 aa12.23□□□□□ -0.45
PDGFRB-205ENST00000519575 CAMTA2O94983 1202 aa12.22□□□□□ -0.45
PDGFRB-205ENST00000519575 CCDC152Q4G0S7 254 aa12.22□□□□□ -0.45
PDGFRB-205ENST00000519575 CCDC158Q5M9N0 1113 aa12.22□□□□□ -0.45
PDGFRB-205ENST00000519575 RNF20Q5VTR2 975 aa12.22□□□□□ -0.45
PDGFRB-205ENST00000519575 FAM89AQ96GI7 184 aa12.22□□□□□ -0.45
PDGFRB-205ENST00000519575 SNRKQ9NRH2 765 aa12.22□□□□□ -0.45
PDGFRB-205ENST00000519575 CHMP5Q9NZZ3 219 aa12.22□□□□□ -0.45
PDGFRB-205ENST00000519575 MROH5Q6ZUA9 1318 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 ADRA2BP18089 450 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 GPTP24298 496 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 ITPK1Q13572 414 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 HLFQ16534 295 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 GORABQ5T7V8 394 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 ATG9AQ7Z3C6 839 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 HAUS7Q99871 368 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 CCDC8Q9H0W5 538 aaPredicted RBP12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 DBNLQ9UJU6 430 aaKnown RBP12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 TBC1D2BQ9UPU7 963 aa12.21□□□□□ -0.45
PDGFRB-205ENST00000519575 DDX60Q8IY21 1712 aaKnown RBP12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 RPS6KA4O75676 772 aa12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 ZFYP08048 801 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 ZKSCAN1P17029 563 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 PTMSP20962 102 aa12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 ITGA6P23229 1130 aa12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 HSPA4P34932 840 aa12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 ZNF772Q68DY9 489 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 FAM196AQ6ZSG2 479 aa12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 TTLL11Q8NHH1 800 aa12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 KLHDC4Q8TBB5 520 aa12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 KIF2CQ99661 725 aa12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 HMG20BQ9P0W2 317 aa12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 CCNL1Q9UK58 526 aaPredicted RBP12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 NIP7Q9Y221 180 aaKnown RBP eCLIP12.2□□□□□ -0.46
PDGFRB-205ENST00000519575 ZPR1O75312 459 aa12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 SLC27A3Q5K4L6 730 aa12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 LDHAL6AQ6ZMR3 332 aa12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 ZNF512BQ96KM6 892 aaPredicted RBP12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 CDC5LQ99459 802 aaKnown RBP12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 CWC22Q9HCG8 908 aaKnown RBP12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 CNNM1Q9NRU3 951 aa12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 RTCBQ9Y3I0 505 aaKnown RBP12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 C4BP0C0L5 1744 aa12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 MYH7P12883 1935 aa12.19□□□□□ -0.46
PDGFRB-205ENST00000519575 CCDC171Q6TFL3 1326 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 UBN2Q6ZU65 1347 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 A0A1B0GUL7 405 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 KCNQ2O43526 872 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 IGHMBP2P38935 993 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 KRT32Q14532 448 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 TTF1Q15361 905 aaPredicted RBP12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 METTL24Q5JXM2 366 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 ZSCAN25Q6NSZ9 544 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 CWC27Q6UX04 472 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 KBTBD3Q8NAB2 608 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 NEUROD6Q96NK8 337 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 BOLA2Q9H3K6 86 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 NARFQ9UHQ1 456 aa12.18□□□□□ -0.46
PDGFRB-205ENST00000519575 NTSR2O95665 410 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 UQCRFS1P1P0C7P4 283 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 PSMA5P28066 241 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 KCNJ4P48050 445 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 SLC4A3P48751 1232 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 PUM3Q15397 648 aaKnown RBP12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 ATP2B3Q16720 1220 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 TTC39AQ5SRH9 613 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 LINC00116Q8NCU8 138 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 MPHOSPH8Q99549 860 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 DBNDD2Q9BQY9 259 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 TM6SF1Q9BZW5 370 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 QTRT2Q9H974 415 aaKnown RBP12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 HELLSQ9NRZ9 838 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 PAG1Q9NWQ8 432 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 TLR7Q9NYK1 1049 aaKnown RBP12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 RIC1Q4ADV7 1423 aa12.17□□□□□ -0.46
PDGFRB-205ENST00000519575 MED23Q9ULK4 1368 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms