RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 TBC1D32Q96NH3 1257 aa17.84■□□□□ 0.45
CLN8-204ENST00000519254 OSBPL3Q9H4L5 887 aa17.84■□□□□ 0.45
CLN8-204ENST00000519254 COL24A1Q17RW2 1714 aa17.83■□□□□ 0.45
CLN8-204ENST00000519254 RAB11FIP3O75154 756 aa17.83■□□□□ 0.44
CLN8-204ENST00000519254 SURF6O75683 361 aaKnown RBP17.83■□□□□ 0.44
CLN8-204ENST00000519254 ERFEQ4G0M1 354 aa17.83■□□□□ 0.44
CLN8-204ENST00000519254 KLHDC4Q8TBB5 520 aa17.83■□□□□ 0.44
CLN8-204ENST00000519254 PA2G4Q9UQ80 394 aaKnown RBP17.83■□□□□ 0.44
CLN8-204ENST00000519254 CARMIL3Q8ND23 1372 aa17.82■□□□□ 0.44
CLN8-204ENST00000519254 PDE1AP54750 535 aa17.82■□□□□ 0.44
CLN8-204ENST00000519254 NYXQ9GZU5 481 aa17.82■□□□□ 0.44
CLN8-204ENST00000519254 UPF2Q9HAU5 1272 aaKnown RBP17.82■□□□□ 0.44
CLN8-204ENST00000519254 PDE8AO60658 829 aa17.81■□□□□ 0.44
CLN8-204ENST00000519254 CTSWP56202 376 aa17.81■□□□□ 0.44
CLN8-204ENST00000519254 CCDC24Q8N4L8 307 aa17.81■□□□□ 0.44
CLN8-204ENST00000519254 UPF1Q92900 1129 aaKnown RBP eCLIP17.81■□□□□ 0.44
CLN8-204ENST00000519254 PLA2G12BQ9BX93 195 aa17.81■□□□□ 0.44
CLN8-204ENST00000519254 DDX60Q8IY21 1712 aaKnown RBP17.81■□□□□ 0.44
CLN8-204ENST00000519254 MFAP1P55081 439 aaKnown RBP17.81■□□□□ 0.44
CLN8-204ENST00000519254 OS9Q13438 667 aaPredicted RBP17.81■□□□□ 0.44
CLN8-204ENST00000519254 MSL1Q68DK7 614 aa17.81■□□□□ 0.44
CLN8-204ENST00000519254 TBC1D9Q6ZT07 1266 aa17.81■□□□□ 0.44
CLN8-204ENST00000519254 SIL1Q9H173 461 aa17.81■□□□□ 0.44
CLN8-204ENST00000519254 TPTE2Q6XPS3 522 aa17.8■□□□□ 0.44
CLN8-204ENST00000519254 RHPN1Q8TCX5 695 aa17.8■□□□□ 0.44
CLN8-204ENST00000519254 MYH3P11055 1940 aa17.8■□□□□ 0.44
CLN8-204ENST00000519254 ABCC12Q96J65 1359 aa17.8■□□□□ 0.44
CLN8-204ENST00000519254 LAMB2P55268 1798 aa17.8■□□□□ 0.44
CLN8-204ENST00000519254 CDC45O75419 566 aa17.79■□□□□ 0.44
CLN8-204ENST00000519254 SDSP20132 328 aa17.79■□□□□ 0.44
CLN8-204ENST00000519254 CCDC57Q2TAC2 916 aa17.79■□□□□ 0.44
CLN8-204ENST00000519254 CNBD1Q8NA66 436 aa17.79■□□□□ 0.44
CLN8-204ENST00000519254 TTLL11Q8NHH1 800 aa17.79■□□□□ 0.44
CLN8-204ENST00000519254 IL1RAPL2Q9NP60 686 aa17.79■□□□□ 0.44
CLN8-204ENST00000519254 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
CLN8-204ENST00000519254 CSF1RP07333 972 aa17.78■□□□□ 0.44
CLN8-204ENST00000519254 HSP90B1P14625 803 aaKnown RBP17.78■□□□□ 0.44
CLN8-204ENST00000519254 MX1P20591 662 aa17.78■□□□□ 0.44
CLN8-204ENST00000519254 RFX5P48382 616 aaPredicted RBP17.78■□□□□ 0.44
CLN8-204ENST00000519254 DDR1Q08345 913 aa17.78■□□□□ 0.44
CLN8-204ENST00000519254 HSP90AB4PQ58FF6 505 aa17.78■□□□□ 0.44
CLN8-204ENST00000519254 NLGN1Q8N2Q7 840 aa17.78■□□□□ 0.44
CLN8-204ENST00000519254 KIF1BPQ96EK5 621 aa17.78■□□□□ 0.44
CLN8-204ENST00000519254 GREM2Q9H772 168 aa17.78■□□□□ 0.44
CLN8-204ENST00000519254 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
CLN8-204ENST00000519254 TM4SF1P30408 202 aa17.77■□□□□ 0.44
CLN8-204ENST00000519254 IFIT5Q13325 482 aaKnown RBP17.77■□□□□ 0.44
CLN8-204ENST00000519254 ZNF594Q96JF6 807 aaPredicted RBP17.77■□□□□ 0.44
CLN8-204ENST00000519254 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
CLN8-204ENST00000519254 SERPINB2P05120 415 aa17.76■□□□□ 0.43
CLN8-204ENST00000519254 ITGA6P23229 1130 aa17.76■□□□□ 0.43
CLN8-204ENST00000519254 PTPN12Q05209 780 aaKnown RBP17.76■□□□□ 0.43
CLN8-204ENST00000519254 G3BP1Q13283 466 aaKnown RBP eCLIP17.76■□□□□ 0.43
CLN8-204ENST00000519254 TAF7LQ5H9L4 462 aa17.76■□□□□ 0.43
CLN8-204ENST00000519254 TSHZ3Q63HK5 1081 aa17.76■□□□□ 0.43
CLN8-204ENST00000519254 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
CLN8-204ENST00000519254 PDGFDQ9GZP0 370 aaPredicted RBP17.76■□□□□ 0.43
CLN8-204ENST00000519254 POLRMTO00411 1230 aaKnown RBP17.76■□□□□ 0.43
CLN8-204ENST00000519254 COPRSQ9NQ92 184 aa17.76■□□□□ 0.43
CLN8-204ENST00000519254 CCDC152Q4G0S7 254 aa17.75■□□□□ 0.43
CLN8-204ENST00000519254 PRR5LQ6MZQ0 368 aa17.75■□□□□ 0.43
CLN8-204ENST00000519254 AK9Q5TCS8 1911 aa17.75■□□□□ 0.43
CLN8-204ENST00000519254 AOX1Q06278 1338 aa17.74■□□□□ 0.43
CLN8-204ENST00000519254 ANKRD18BA2A2Z9 1011 aa17.74■□□□□ 0.43
CLN8-204ENST00000519254 MMP10P09238 476 aa17.74■□□□□ 0.43
CLN8-204ENST00000519254 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
CLN8-204ENST00000519254 CASZ1Q86V15 1759 aa17.74■□□□□ 0.43
CLN8-204ENST00000519254 ST5P78524 1137 aa17.74■□□□□ 0.43
CLN8-204ENST00000519254 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
CLN8-204ENST00000519254 ERC1Q8IUD2 1116 aa17.74■□□□□ 0.43
CLN8-204ENST00000519254 TNRC6CQ9HCJ0 1690 aaKnown RBP17.73■□□□□ 0.43
CLN8-204ENST00000519254 SLC4A3P48751 1232 aa17.73■□□□□ 0.43
CLN8-204ENST00000519254 NLRP3Q96P20 1036 aa17.73■□□□□ 0.43
CLN8-204ENST00000519254 SEC31BQ9NQW1 1179 aa17.73■□□□□ 0.43
CLN8-204ENST00000519254 PARP3Q9Y6F1 533 aa17.73■□□□□ 0.43
CLN8-204ENST00000519254 RBM25P49756 843 aaKnown RBP17.72■□□□□ 0.43
CLN8-204ENST00000519254 ILDR2Q71H61 639 aa17.72■□□□□ 0.43
CLN8-204ENST00000519254 PUS3Q9BZE2 481 aaKnown RBP17.72■□□□□ 0.43
CLN8-204ENST00000519254 SASH1O94885 1247 aa17.71■□□□□ 0.43
CLN8-204ENST00000519254 LRRC24Q50LG9 513 aa17.71■□□□□ 0.43
CLN8-204ENST00000519254 EYA2O00167 538 aa17.71■□□□□ 0.43
CLN8-204ENST00000519254 SF3B3Q15393 1217 aaKnown RBP17.7■□□□□ 0.42
CLN8-204ENST00000519254 PI4K2BQ8TCG2 481 aa17.7■□□□□ 0.42
CLN8-204ENST00000519254 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.7■□□□□ 0.42
CLN8-204ENST00000519254 SPEF2Q9C093 1822 aa17.69■□□□□ 0.42
CLN8-204ENST00000519254 TFCP2Q12800 502 aa17.69■□□□□ 0.42
CLN8-204ENST00000519254 LDHAL6AQ6ZMR3 332 aa17.69■□□□□ 0.42
CLN8-204ENST00000519254 ATG9AQ7Z3C6 839 aa17.69■□□□□ 0.42
CLN8-204ENST00000519254 CNNM1Q9NRU3 951 aa17.69■□□□□ 0.42
CLN8-204ENST00000519254 RTL9Q8NET4 1388 aa17.69■□□□□ 0.42
CLN8-204ENST00000519254 IL15P40933 162 aaPredicted RBP17.68■□□□□ 0.42
CLN8-204ENST00000519254 R3HDM1Q15032 1099 aaKnown RBP17.68■□□□□ 0.42
CLN8-204ENST00000519254 CLASRPQ8N2M8 674 aaKnown RBP17.68■□□□□ 0.42
CLN8-204ENST00000519254 CIAO1O76071 339 aa17.68■□□□□ 0.42
CLN8-204ENST00000519254 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
CLN8-204ENST00000519254 COL4A1P02462 1669 aa17.68■□□□□ 0.42
CLN8-204ENST00000519254 TAF1P21675 1872 aa17.67■□□□□ 0.42
CLN8-204ENST00000519254 EIF5BO60841 1220 aaKnown RBP17.67■□□□□ 0.42
CLN8-204ENST00000519254 IGHMBP2P38935 993 aaKnown RBP17.67■□□□□ 0.42
CLN8-204ENST00000519254 CASC1Q6TDU7 716 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms