RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 CCDC93Q567U6 631 aa25.91■■□□□ 1.74
TNFRSF10B-204ENST00000519028 GRAPLQ8TC17 118 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF10B-204ENST00000519028 PLA2G12BQ9BX93 195 aa25.91■■□□□ 1.74
TNFRSF10B-204ENST00000519028 SLC51AQ86UW1 340 aa25.9■■□□□ 1.74
TNFRSF10B-204ENST00000519028 ARHGAP45Q92619 1136 aa25.9■■□□□ 1.74
TNFRSF10B-204ENST00000519028 GRM8O00222 908 aa25.89■■□□□ 1.74
TNFRSF10B-204ENST00000519028 CTSWP56202 376 aa25.89■■□□□ 1.74
TNFRSF10B-204ENST00000519028 CCDC152Q4G0S7 254 aa25.89■■□□□ 1.74
TNFRSF10B-204ENST00000519028 C9orf131Q5VYM1 1079 aa25.89■■□□□ 1.74
TNFRSF10B-204ENST00000519028 CC2D2BQ6DHV5 1058 aa25.89■■□□□ 1.74
TNFRSF10B-204ENST00000519028 RTKN2Q8IZC4 609 aa25.89■■□□□ 1.74
TNFRSF10B-204ENST00000519028 TTLL11Q8NHH1 800 aa25.89■■□□□ 1.74
TNFRSF10B-204ENST00000519028 CELF1Q92879 486 aaKnown RBP25.89■■□□□ 1.74
TNFRSF10B-204ENST00000519028 ATP6V0A2Q9Y487 856 aa25.89■■□□□ 1.74
TNFRSF10B-204ENST00000519028 LTBP3Q9NS15 1303 aa25.88■■□□□ 1.73
TNFRSF10B-204ENST00000519028 API5Q9BZZ5 524 aaKnown RBP25.88■■□□□ 1.73
TNFRSF10B-204ENST00000519028 SEC31BQ9NQW1 1179 aa25.88■■□□□ 1.73
TNFRSF10B-204ENST00000519028 SNED1Q8TER0 1413 aa25.88■■□□□ 1.73
TNFRSF10B-204ENST00000519028 KIF16BQ96L93 1317 aa25.88■■□□□ 1.73
TNFRSF10B-204ENST00000519028 LMNB1P20700 586 aa25.87■■□□□ 1.73
TNFRSF10B-204ENST00000519028 SP8Q8IXZ3 490 aa25.87■■□□□ 1.73
TNFRSF10B-204ENST00000519028 CCDC85AQ96PX6 553 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF10B-204ENST00000519028 TAOK3Q9H2K8 898 aa25.87■■□□□ 1.73
TNFRSF10B-204ENST00000519028 C9orf78Q9NZ63 289 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF10B-204ENST00000519028 COL4A1P02462 1669 aa25.87■■□□□ 1.73
TNFRSF10B-204ENST00000519028 CSF1RP07333 972 aa25.86■■□□□ 1.73
TNFRSF10B-204ENST00000519028 RNF181Q9P0P0 153 aa25.86■■□□□ 1.73
TNFRSF10B-204ENST00000519028 MYH3P11055 1940 aa25.86■■□□□ 1.73
TNFRSF10B-204ENST00000519028 UTYO14607 1347 aa25.86■■□□□ 1.73
TNFRSF10B-204ENST00000519028 RPS8P62241 208 aaKnown RBP25.85■■□□□ 1.73
TNFRSF10B-204ENST00000519028 FOXO4P98177 505 aa25.85■■□□□ 1.73
TNFRSF10B-204ENST00000519028 FKBP4Q02790 459 aaKnown RBP eCLIP25.85■■□□□ 1.73
TNFRSF10B-204ENST00000519028 GRIPAP1Q4V328 841 aa25.85■■□□□ 1.73
TNFRSF10B-204ENST00000519028 CCDC88AQ3V6T2 1871 aa25.85■■□□□ 1.73
TNFRSF10B-204ENST00000519028 IPO8O15397 1037 aaKnown RBP25.84■■□□□ 1.73
TNFRSF10B-204ENST00000519028 NBPF7P0C2Y1 421 aaPredicted RBP25.84■■□□□ 1.73
TNFRSF10B-204ENST00000519028 TMC4Q7Z404 712 aa25.84■■□□□ 1.73
TNFRSF10B-204ENST00000519028 GREM2Q9H772 168 aa25.84■■□□□ 1.73
TNFRSF10B-204ENST00000519028 FRAT1Q92837 279 aaPredicted RBP25.83■■□□□ 1.73
TNFRSF10B-204ENST00000519028 PSMD1Q99460 953 aa25.83■■□□□ 1.73
TNFRSF10B-204ENST00000519028 USP44Q9H0E7 712 aa25.83■■□□□ 1.73
TNFRSF10B-204ENST00000519028 CCT4P50991 539 aaKnown RBP25.82■■□□□ 1.72
TNFRSF10B-204ENST00000519028 EPHA10Q5JZY3 1008 aa25.82■■□□□ 1.72
TNFRSF10B-204ENST00000519028 ZNF784Q8NCA9 323 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF10B-204ENST00000519028 TMX4Q9H1E5 349 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF10B-204ENST00000519028 RTL9Q8NET4 1388 aa25.82■■□□□ 1.72
TNFRSF10B-204ENST00000519028 TRIM27P14373 513 aa25.81■■□□□ 1.72
TNFRSF10B-204ENST00000519028 ATF7IPQ6VMQ6 1270 aa25.81■■□□□ 1.72
TNFRSF10B-204ENST00000519028 KAZALD1Q96I82 304 aa25.81■■□□□ 1.72
TNFRSF10B-204ENST00000519028 SUCLG2Q96I99 432 aa25.8■■□□□ 1.72
TNFRSF10B-204ENST00000519028 ZNF277Q9NRM2 450 aaPredicted RBP25.8■■□□□ 1.72
TNFRSF10B-204ENST00000519028 TNNQ9UQP3 1299 aa25.8■■□□□ 1.72
TNFRSF10B-204ENST00000519028 INTS3Q68E01 1043 aaKnown RBP25.79■■□□□ 1.72
TNFRSF10B-204ENST00000519028 ITGA6P23229 1130 aa25.78■■□□□ 1.72
TNFRSF10B-204ENST00000519028 ZKSCAN2Q63HK3 967 aa25.78■■□□□ 1.72
TNFRSF10B-204ENST00000519028 LMBR1LQ6UX01 489 aa25.78■■□□□ 1.72
TNFRSF10B-204ENST00000519028 ANKRD18AQ8IVF6 992 aa25.78■■□□□ 1.72
TNFRSF10B-204ENST00000519028 MPNDQ8N594 471 aa25.78■■□□□ 1.72
TNFRSF10B-204ENST00000519028 CDC5LQ99459 802 aaKnown RBP25.78■■□□□ 1.72
TNFRSF10B-204ENST00000519028 RTFDC1Q9BY42 306 aaPredicted RBP25.78■■□□□ 1.72
TNFRSF10B-204ENST00000519028 DICER1Q9UPY3 1922 aaKnown RBP25.78■■□□□ 1.72
TNFRSF10B-204ENST00000519028 FAM161AQ3B820 660 aa25.77■■□□□ 1.72
TNFRSF10B-204ENST00000519028 YTHDC1Q96MU7 727 aaKnown RBP25.77■■□□□ 1.72
TNFRSF10B-204ENST00000519028 LRRC37AA6NMS7 1700 aa25.77■■□□□ 1.72
TNFRSF10B-204ENST00000519028 IARSP41252 1262 aaKnown RBP25.76■■□□□ 1.71
TNFRSF10B-204ENST00000519028 DPP8Q6V1X1 898 aaPredicted RBP25.76■■□□□ 1.71
TNFRSF10B-204ENST00000519028 ZC3H4Q9UPT8 1303 aaKnown RBP25.75■■□□□ 1.71
TNFRSF10B-204ENST00000519028 CLUAP1Q96AJ1 413 aa25.75■■□□□ 1.71
TNFRSF10B-204ENST00000519028 BSDC1Q9NW68 430 aaPredicted RBP25.75■■□□□ 1.71
TNFRSF10B-204ENST00000519028 NSFL1CQ9UNZ2 370 aaKnown RBP25.75■■□□□ 1.71
TNFRSF10B-204ENST00000519028 GPSM2P81274 684 aa25.74■■□□□ 1.71
TNFRSF10B-204ENST00000519028 ANKRD18BA2A2Z9 1011 aa25.73■■□□□ 1.71
TNFRSF10B-204ENST00000519028 RABL6Q3YEC7 729 aaPredicted RBP25.73■■□□□ 1.71
TNFRSF10B-204ENST00000519028 SUPT20HQ8NEM7 779 aa25.73■■□□□ 1.71
TNFRSF10B-204ENST00000519028 VPS33BQ9H267 617 aa25.73■■□□□ 1.71
TNFRSF10B-204ENST00000519028 BICC1Q9H694 974 aaKnown RBP25.73■■□□□ 1.71
TNFRSF10B-204ENST00000519028 IFIT5Q13325 482 aaKnown RBP25.72■■□□□ 1.71
TNFRSF10B-204ENST00000519028 PODXL2Q9NZ53 605 aa25.72■■□□□ 1.71
TNFRSF10B-204ENST00000519028 RCAN3Q9UKA8 241 aa25.72■■□□□ 1.71
TNFRSF10B-204ENST00000519028 CHMP3Q9Y3E7 222 aa25.72■■□□□ 1.71
TNFRSF10B-204ENST00000519028 IGHMBP2P38935 993 aaKnown RBP25.71■■□□□ 1.71
TNFRSF10B-204ENST00000519028 ANKRD44Q8N8A2 993 aa25.71■■□□□ 1.71
TNFRSF10B-204ENST00000519028 ZNF526Q8TF50 670 aaPredicted RBP25.71■■□□□ 1.71
TNFRSF10B-204ENST00000519028 POLLQ9UGP5 575 aa25.71■■□□□ 1.71
TNFRSF10B-204ENST00000519028 MINPP1Q9UNW1 487 aa25.71■■□□□ 1.71
TNFRSF10B-204ENST00000519028 TIAM2Q8IVF5 1701 aa25.71■■□□□ 1.71
TNFRSF10B-204ENST00000519028 CCDC57Q2TAC2 916 aa25.7■■□□□ 1.7
TNFRSF10B-204ENST00000519028 DUOX1Q9NRD9 1551 aa25.69■■□□□ 1.7
TNFRSF10B-204ENST00000519028 LTBP1Q14766 1721 aa25.69■■□□□ 1.7
TNFRSF10B-204ENST00000519028 UBTFL1P0CB47 393 aaPredicted RBP25.69■■□□□ 1.7
TNFRSF10B-204ENST00000519028 AOC3Q16853 763 aa25.69■■□□□ 1.7
TNFRSF10B-204ENST00000519028 TMEM57Q8N5G2 664 aa25.69■■□□□ 1.7
TNFRSF10B-204ENST00000519028 MEIS3Q99687 375 aa25.69■■□□□ 1.7
TNFRSF10B-204ENST00000519028 ANKIB1Q9P2G1 1089 aa25.69■■□□□ 1.7
TNFRSF10B-204ENST00000519028 COL4A5P29400 1685 aa25.68■■□□□ 1.7
TNFRSF10B-204ENST00000519028 SPEF2Q9C093 1822 aa25.68■■□□□ 1.7
TNFRSF10B-204ENST00000519028 GLTPD2A6NH11 291 aa25.68■■□□□ 1.7
TNFRSF10B-204ENST00000519028 FZD9O00144 591 aa25.68■■□□□ 1.7
TNFRSF10B-204ENST00000519028 PPIP5K2O43314 1243 aa25.68■■□□□ 1.7
TNFRSF10B-204ENST00000519028 LARGE2Q8N3Y3 721 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms