RNA–Protein interactions for RNA: ENST00000518951.6

TOP1MT-206, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5

Gene TOP1MT, Length 1,461 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-206ENST00000518951 TTLL11Q8NHH1 800 aa26.39■■□□□ 1.82
TOP1MT-206ENST00000518951 GNAI3P08754 354 aa26.38■■□□□ 1.81
TOP1MT-206ENST00000518951 CTSWP56202 376 aa26.38■■□□□ 1.81
TOP1MT-206ENST00000518951 CCDC85AQ96PX6 553 aaPredicted RBP26.38■■□□□ 1.81
TOP1MT-206ENST00000518951 COL4A1P02462 1669 aa26.38■■□□□ 1.81
TOP1MT-206ENST00000518951 HSP90B1P14625 803 aaKnown RBP26.37■■□□□ 1.81
TOP1MT-206ENST00000518951 BICC1Q9H694 974 aaKnown RBP26.37■■□□□ 1.81
TOP1MT-206ENST00000518951 DDX19BQ9UMR2 479 aa26.37■■□□□ 1.81
TOP1MT-206ENST00000518951 LRRFIP2Q9Y608 721 aaKnown RBP26.37■■□□□ 1.81
TOP1MT-206ENST00000518951 CSF1RP07333 972 aa26.36■■□□□ 1.81
TOP1MT-206ENST00000518951 ANKRD44Q8N8A2 993 aa26.36■■□□□ 1.81
TOP1MT-206ENST00000518951 CRBNQ96SW2 442 aa26.36■■□□□ 1.81
TOP1MT-206ENST00000518951 PDZRN3Q9UPQ7 1066 aa26.36■■□□□ 1.81
TOP1MT-206ENST00000518951 MASTLQ96GX5 879 aa26.36■■□□□ 1.81
TOP1MT-206ENST00000518951 NPR1P16066 1061 aa26.35■■□□□ 1.81
TOP1MT-206ENST00000518951 HOXA10P31260 410 aaPredicted RBP26.35■■□□□ 1.81
TOP1MT-206ENST00000518951 LMBR1LQ6UX01 489 aa26.35■■□□□ 1.81
TOP1MT-206ENST00000518951 ZNF622Q969S3 477 aaKnown RBP eCLIP26.35■■□□□ 1.816e-7■□□□□ 8.7
TOP1MT-206ENST00000518951 WWC3Q9ULE0 1092 aa26.35■■□□□ 1.81
TOP1MT-206ENST00000518951 RPGRQ92834 1020 aaKnown RBP26.34■■□□□ 1.81
TOP1MT-206ENST00000518951 GREM2Q9H772 168 aa26.34■■□□□ 1.81
TOP1MT-206ENST00000518951 C1orf115Q9H7X2 142 aa26.34■■□□□ 1.81
TOP1MT-206ENST00000518951 SEC31BQ9NQW1 1179 aa26.34■■□□□ 1.81
TOP1MT-206ENST00000518951 SLX4Q8IY92 1834 aa26.34■■□□□ 1.81
TOP1MT-206ENST00000518951 IRX6P78412 446 aaPredicted RBP26.33■■□□□ 1.81
TOP1MT-206ENST00000518951 RABL6Q3YEC7 729 aaPredicted RBP26.33■■□□□ 1.81
TOP1MT-206ENST00000518951 CCDC152Q4G0S7 254 aa26.33■■□□□ 1.81
TOP1MT-206ENST00000518951 STYK1Q6J9G0 422 aa26.33■■□□□ 1.81
TOP1MT-206ENST00000518951 ZBTB40Q9NUA8 1239 aa26.33■■□□□ 1.81
TOP1MT-206ENST00000518951 GNAI2P04899 355 aa26.32■■□□□ 1.8
TOP1MT-206ENST00000518951 FAM161AQ3B820 660 aa26.32■■□□□ 1.8
TOP1MT-206ENST00000518951 GOLGB1Q14789 3259 aaKnown RBP26.32■■□□□ 1.8
TOP1MT-206ENST00000518951 RBM17Q96I25 401 aaKnown RBP26.31■■□□□ 1.8
TOP1MT-206ENST00000518951 DDX46Q7L014 1031 aaKnown RBP26.3■■□□□ 1.8
TOP1MT-206ENST00000518951 CRAMP1Q96RY5 1269 aa26.3■■□□□ 1.8
TOP1MT-206ENST00000518951 PIM2Q9P1W9 311 aa26.3■■□□□ 1.8
TOP1MT-206ENST00000518951 RTL9Q8NET4 1388 aa26.3■■□□□ 1.8
TOP1MT-206ENST00000518951 CELF1Q92879 486 aaKnown RBP26.3■■□□□ 1.8
TOP1MT-206ENST00000518951 CHMP3Q9Y3E7 222 aa26.3■■□□□ 1.8
TOP1MT-206ENST00000518951 SPEF2Q9C093 1822 aa26.29■■□□□ 1.8
TOP1MT-206ENST00000518951 HDAC5Q9UQL6 1122 aa26.29■■□□□ 1.8
TOP1MT-206ENST00000518951 ITGA6P23229 1130 aa26.28■■□□□ 1.8
TOP1MT-206ENST00000518951 SLC51AQ86UW1 340 aa26.28■■□□□ 1.8
TOP1MT-206ENST00000518951 TTLL6Q8N841 843 aa26.28■■□□□ 1.8
TOP1MT-206ENST00000518951 CNKSR1Q969H4 720 aa26.28■■□□□ 1.8
TOP1MT-206ENST00000518951 ALDH1B1P30837 517 aa26.27■■□□□ 1.8
TOP1MT-206ENST00000518951 EXOC6Q8TAG9 804 aa26.27■■□□□ 1.8
TOP1MT-206ENST00000518951 GRAPQ13588 217 aa26.26■■□□□ 1.79
TOP1MT-206ENST00000518951 PRPF40BQ6NWY9 871 aaKnown RBP26.26■■□□□ 1.79
TOP1MT-206ENST00000518951 GRAPLQ8TC17 118 aaPredicted RBP26.26■■□□□ 1.79
TOP1MT-206ENST00000518951 CHMP4BQ9H444 224 aaKnown RBP26.25■■□□□ 1.79
TOP1MT-206ENST00000518951 ARFGEF1Q9Y6D6 1849 aa26.25■■□□□ 1.79
TOP1MT-206ENST00000518951 IFIT5Q13325 482 aaKnown RBP26.24■■□□□ 1.79
TOP1MT-206ENST00000518951 MTX1Q13505 466 aa26.24■■□□□ 1.79
TOP1MT-206ENST00000518951 DALRD3Q5D0E6 543 aaKnown RBP26.24■■□□□ 1.79
TOP1MT-206ENST00000518951 ZNF594Q96JF6 807 aaPredicted RBP26.24■■□□□ 1.79
TOP1MT-206ENST00000518951 PNMA6EA0A0J9YXQ4 647 aa26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 ANKRD18BA2A2Z9 1011 aa26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 RFX5P48382 616 aaPredicted RBP26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 RPS8P62241 208 aaKnown RBP26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 BCS1LQ9Y276 419 aa26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 CCDC57Q2TAC2 916 aa26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 CEP85Q6P2H3 762 aa26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 OLFM4Q6UX06 510 aa26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 KLHDC4Q8TBB5 520 aa26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 C7orf43Q8WVR3 580 aa26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 ZNF219Q9P2Y4 722 aaPredicted RBP26.23■■□□□ 1.79
TOP1MT-206ENST00000518951 BBOX1O75936 387 aa26.22■■□□□ 1.79
TOP1MT-206ENST00000518951 ATP8B2P98198 1209 aa26.22■■□□□ 1.79
TOP1MT-206ENST00000518951 CDC5LQ99459 802 aaKnown RBP26.22■■□□□ 1.79
TOP1MT-206ENST00000518951 PPEF1O14829 653 aaPredicted RBP26.21■■□□□ 1.79
TOP1MT-206ENST00000518951 SRGAP3O43295 1099 aa26.21■■□□□ 1.79
TOP1MT-206ENST00000518951 ANKRD18AQ8IVF6 992 aa26.21■■□□□ 1.79
TOP1MT-206ENST00000518951 C21orf2O43822 256 aa26.2■■□□□ 1.78
TOP1MT-206ENST00000518951 YBX3P16989 372 aaKnown RBP eCLIP26.2■■□□□ 1.781e-6■■□□□ 12.7
TOP1MT-206ENST00000518951 LRRC37AA6NMS7 1700 aa26.2■■□□□ 1.78
TOP1MT-206ENST00000518951 PTPN12Q05209 780 aaKnown RBP26.19■■□□□ 1.78
TOP1MT-206ENST00000518951 SIRT2Q8IXJ6 389 aa26.19■■□□□ 1.78
TOP1MT-206ENST00000518951 PELP1Q8IZL8 1130 aaKnown RBP26.18■■□□□ 1.78
TOP1MT-206ENST00000518951 PA2G4Q9UQ80 394 aaKnown RBP26.18■■□□□ 1.78
TOP1MT-206ENST00000518951 PCDHB15Q9Y5E8 787 aa26.18■■□□□ 1.78
TOP1MT-206ENST00000518951 POLA2Q14181 598 aa26.17■■□□□ 1.78
TOP1MT-206ENST00000518951 SSH3Q8TE77 659 aa26.17■■□□□ 1.78
TOP1MT-206ENST00000518951 PUS3Q9BZE2 481 aaKnown RBP26.17■■□□□ 1.78
TOP1MT-206ENST00000518951 ATP6V0A2Q9Y487 856 aa26.17■■□□□ 1.78
TOP1MT-206ENST00000518951 IGHMBP2P38935 993 aaKnown RBP26.17■■□□□ 1.78
TOP1MT-206ENST00000518951 TAF7LQ5H9L4 462 aa26.17■■□□□ 1.78
TOP1MT-206ENST00000518951 RPAP2Q8IXW5 612 aaPredicted RBP26.17■■□□□ 1.78
TOP1MT-206ENST00000518951 SP8Q8IXZ3 490 aa26.17■■□□□ 1.78
TOP1MT-206ENST00000518951 BSDC1Q9NW68 430 aaPredicted RBP26.17■■□□□ 1.78
TOP1MT-206ENST00000518951 A0A1B0GUL6 1792 aa26.16■■□□□ 1.78
TOP1MT-206ENST00000518951 SNED1Q8TER0 1413 aa26.15■■□□□ 1.78
TOP1MT-206ENST00000518951 LRRC24Q50LG9 513 aa26.15■■□□□ 1.78
TOP1MT-206ENST00000518951 LDHAL6AQ6ZMR3 332 aa26.15■■□□□ 1.78
TOP1MT-206ENST00000518951 MPHOSPH8Q99549 860 aa26.15■■□□□ 1.78
TOP1MT-206ENST00000518951 COPRSQ9NQ92 184 aa26.15■■□□□ 1.78
TOP1MT-206ENST00000518951 FER1L6Q2WGJ9 1857 aa26.15■■□□□ 1.78
TOP1MT-206ENST00000518951 TMC4Q7Z404 712 aa26.14■■□□□ 1.78
TOP1MT-206ENST00000518951 UTRNP46939 3433 aa26.14■■□□□ 1.77
TOP1MT-206ENST00000518951 GPR162Q16538 588 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms