RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 PRR23CQ6ZRP0 262 aa6.47□□□□□ -1.37
PCM1-208ENST00000518877 HFE2Q6ZVN8 426 aa6.47□□□□□ -1.37
PCM1-208ENST00000518877 SMG9Q9H0W8 520 aaKnown RBP6.47□□□□□ -1.37
PCM1-208ENST00000518877 PCMTD2Q9NV79 361 aa6.47□□□□□ -1.37
PCM1-208ENST00000518877 ZFATQ9P243 1243 aa6.47□□□□□ -1.37
PCM1-208ENST00000518877 DMGDHQ9UI17 866 aaKnown RBP6.47□□□□□ -1.37
PCM1-208ENST00000518877 SASH3O75995 380 aa6.46□□□□□ -1.38
PCM1-208ENST00000518877 MAP3K6O95382 1288 aa6.46□□□□□ -1.38
PCM1-208ENST00000518877 GRNP28799 593 aaKnown RBP6.46□□□□□ -1.38
PCM1-208ENST00000518877 INPP5BP32019 993 aa6.46□□□□□ -1.38
PCM1-208ENST00000518877 GPLD1P80108 840 aa6.46□□□□□ -1.38
PCM1-208ENST00000518877 FLIIQ13045 1269 aa6.46□□□□□ -1.38
PCM1-208ENST00000518877 DGKZQ13574 1117 aa6.46□□□□□ -1.38
PCM1-208ENST00000518877 TRPM4Q8TD43 1214 aa6.46□□□□□ -1.38
PCM1-208ENST00000518877 IFT43Q96FT9 208 aa6.46□□□□□ -1.38
PCM1-208ENST00000518877 IGFBP4P22692 258 aa6.45□□□□□ -1.38
PCM1-208ENST00000518877 VTI1AQ96AJ9 217 aa6.45□□□□□ -1.38
PCM1-208ENST00000518877 AKTIPQ9H8T0 292 aa6.45□□□□□ -1.38
PCM1-208ENST00000518877 TFIP11Q9UBB9 837 aaKnown RBP6.45□□□□□ -1.38
PCM1-208ENST00000518877 SSTR4P31391 388 aa6.44□□□□□ -1.38
PCM1-208ENST00000518877 DPYDQ12882 1025 aa6.44□□□□□ -1.38
PCM1-208ENST00000518877 TTC9Q92623 222 aa6.44□□□□□ -1.38
PCM1-208ENST00000518877 BTBD11A6QL63 1104 aa6.43□□□□□ -1.38
PCM1-208ENST00000518877 DEAF1O75398 565 aaPredicted RBP6.43□□□□□ -1.38
PCM1-208ENST00000518877 MICAL2O94851 1124 aa6.43□□□□□ -1.38
PCM1-208ENST00000518877 ALX3O95076 343 aa6.43□□□□□ -1.38
PCM1-208ENST00000518877 FSTP19883 344 aa6.43□□□□□ -1.38
PCM1-208ENST00000518877 CRTC2Q53ET0 693 aaPredicted RBP6.43□□□□□ -1.38
PCM1-208ENST00000518877 MCTP1Q6DN14 999 aa6.43□□□□□ -1.38
PCM1-208ENST00000518877 GDF6Q6KF10 455 aaPredicted RBP6.43□□□□□ -1.38
PCM1-208ENST00000518877 GLMNQ92990 594 aa6.43□□□□□ -1.38
PCM1-208ENST00000518877 MRPL18Q9H0U6 180 aaKnown RBP6.43□□□□□ -1.38
PCM1-208ENST00000518877 GOLGA2P5Q9HBQ8 144 aa6.43□□□□□ -1.38
PCM1-208ENST00000518877 MAFBQ9Y5Q3 323 aaPredicted RBP6.43□□□□□ -1.38
PCM1-208ENST00000518877 DLL1O00548 723 aa6.42□□□□□ -1.38
PCM1-208ENST00000518877 PTCD1O75127 700 aaKnown RBP6.42□□□□□ -1.38
PCM1-208ENST00000518877 NRLP54845 237 aa6.42□□□□□ -1.38
PCM1-208ENST00000518877 C11orf16Q9NQ32 467 aa6.42□□□□□ -1.38
PCM1-208ENST00000518877 USP20Q9Y2K6 914 aa6.42□□□□□ -1.38
PCM1-208ENST00000518877 USP17L15C9J2P7 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L10C9JJH3 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L13C9JLJ4 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L12C9JPN9 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L11C9JVI0 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L21D6R901 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L18D6R9N7 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L22D6RA61 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L17D6RBQ6 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L19D6RCP7 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L20D6RJB6 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 J3QW42 95 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 GHRHP01286 108 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 PSAPP07602 524 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 USP17L24Q0WX57 530 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 PTK7Q13308 1070 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 C11orf91Q3C1V1 193 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 DZIP1LQ8IYY4 767 aaKnown RBP6.41□□□□□ -1.38
PCM1-208ENST00000518877 CMTR1Q8N1G2 835 aaKnown RBP6.41□□□□□ -1.38
PCM1-208ENST00000518877 PLD4Q96BZ4 506 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 RBSNQ9H1K0 784 aa6.41□□□□□ -1.38
PCM1-208ENST00000518877 QTRT2Q9H974 415 aaKnown RBP6.41□□□□□ -1.38
PCM1-208ENST00000518877 TLR7Q9NYK1 1049 aaKnown RBP6.41□□□□□ -1.38
PCM1-208ENST00000518877 PAX4O43316 350 aa6.4□□□□□ -1.38
PCM1-208ENST00000518877 XYLBO75191 536 aa6.4□□□□□ -1.38
PCM1-208ENST00000518877 SLC51AQ86UW1 340 aa6.4□□□□□ -1.38
PCM1-208ENST00000518877 ANKMY2Q8IV38 441 aa6.4□□□□□ -1.38
PCM1-208ENST00000518877 IL22RA1Q8N6P7 574 aa6.4□□□□□ -1.38
PCM1-208ENST00000518877 DCAF11Q8TEB1 546 aa6.4□□□□□ -1.38
PCM1-208ENST00000518877 NSUN5Q96P11 429 aaKnown RBP6.4□□□□□ -1.38
PCM1-208ENST00000518877 RTCBQ9Y3I0 505 aaKnown RBP6.4□□□□□ -1.38
PCM1-208ENST00000518877 LOC102724428A0A0B4J2F2 783 aa6.39□□□□□ -1.39
PCM1-208ENST00000518877 F8W735 103 aaPredicted RBP6.39□□□□□ -1.39
PCM1-208ENST00000518877 FOXO3O43524 673 aa6.39□□□□□ -1.39
PCM1-208ENST00000518877 GLB1P16278 677 aa6.39□□□□□ -1.39
PCM1-208ENST00000518877 SIK1P57059 783 aa6.39□□□□□ -1.39
PCM1-208ENST00000518877 RGL4Q8IZJ4 473 aa6.39□□□□□ -1.39
PCM1-208ENST00000518877 AGGF1Q8N302 714 aaeCLIP6.39□□□□□ -1.396e-11■■■■■ 37.5
PCM1-208ENST00000518877 TMEM130Q8N3G9 435 aa6.39□□□□□ -1.39
PCM1-208ENST00000518877 FAM196BA6NMK8 535 aa6.38□□□□□ -1.39
PCM1-208ENST00000518877 IRAK1P51617 712 aa6.38□□□□□ -1.39
PCM1-208ENST00000518877 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
PCM1-208ENST00000518877 VRTNQ9H8Y1 702 aa6.38□□□□□ -1.39
PCM1-208ENST00000518877 SRA1Q9HD15 236 aaKnown RBP6.38□□□□□ -1.39
PCM1-208ENST00000518877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.38□□□□□ -1.39
PCM1-208ENST00000518877 COL17A1Q9UMD9 1497 aaPredicted RBP6.37□□□□□ -1.39
PCM1-208ENST00000518877 GSC2O15499 205 aa6.37□□□□□ -1.39
PCM1-208ENST00000518877 MMP20O60882 483 aa6.37□□□□□ -1.39
PCM1-208ENST00000518877 MAP4K3Q8IVH8 894 aa6.37□□□□□ -1.39
PCM1-208ENST00000518877 MYO19Q96H55 970 aa6.37□□□□□ -1.39
PCM1-208ENST00000518877 PPP1R12CQ9BZL4 782 aa6.37□□□□□ -1.39
PCM1-208ENST00000518877 RAXQ9Y2V3 346 aa6.37□□□□□ -1.39
PCM1-208ENST00000518877 OPLAHO14841 1288 aa6.36□□□□□ -1.39
PCM1-208ENST00000518877 EGFRP00533 1210 aa6.36□□□□□ -1.39
PCM1-208ENST00000518877 LMOD1P29536 600 aaPredicted RBP6.36□□□□□ -1.39
PCM1-208ENST00000518877 TXKP42681 527 aa6.36□□□□□ -1.39
PCM1-208ENST00000518877 CD97P48960 835 aa6.36□□□□□ -1.39
PCM1-208ENST00000518877 SETDB1Q15047 1291 aa6.36□□□□□ -1.39
PCM1-208ENST00000518877 KANK4Q5T7N3 995 aaPredicted RBP6.36□□□□□ -1.39
PCM1-208ENST00000518877 PROSER2Q86WR7 435 aaPredicted RBP6.36□□□□□ -1.39
PCM1-208ENST00000518877 TREML1Q86YW5 311 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms