RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TNS1Q9HBL0 1735 aaKnown RBP18.44■□□□□ 0.54
TRAPPC9-205ENST00000518839 ANKRD18BA2A2Z9 1011 aa18.44■□□□□ 0.54
TRAPPC9-205ENST00000518839 RFC4P35249 363 aa18.44■□□□□ 0.54
TRAPPC9-205ENST00000518839 TTLL11Q8NHH1 800 aa18.44■□□□□ 0.54
TRAPPC9-205ENST00000518839 NYXQ9GZU5 481 aa18.44■□□□□ 0.54
TRAPPC9-205ENST00000518839 LRRC4BQ9NT99 713 aa18.44■□□□□ 0.54
TRAPPC9-205ENST00000518839 ECHDC1Q9NTX5 307 aa18.44■□□□□ 0.54
TRAPPC9-205ENST00000518839 TXNRD1Q16881 649 aa18.43■□□□□ 0.54
TRAPPC9-205ENST00000518839 USPL1Q5W0Q7 1092 aa18.43■□□□□ 0.54
TRAPPC9-205ENST00000518839 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
TRAPPC9-205ENST00000518839 ARHGEF1Q92888 912 aaKnown RBP18.43■□□□□ 0.54
TRAPPC9-205ENST00000518839 RGS17Q9UGC6 210 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC9-205ENST00000518839 RTL9Q8NET4 1388 aa18.42■□□□□ 0.54
TRAPPC9-205ENST00000518839 SSFA2P28290 1259 aa18.42■□□□□ 0.54
TRAPPC9-205ENST00000518839 TNNI3KQ59H18 835 aa18.42■□□□□ 0.54
TRAPPC9-205ENST00000518839 PI4K2BQ8TCG2 481 aa18.42■□□□□ 0.54
TRAPPC9-205ENST00000518839 EAF2Q96CJ1 260 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC9-205ENST00000518839 SETDB2Q96T68 719 aa18.42■□□□□ 0.54
TRAPPC9-205ENST00000518839 BCL2L12Q9HB09 334 aa18.42■□□□□ 0.54
TRAPPC9-205ENST00000518839 FPGT-TNNI3KV9GXZ4 949 aa18.42■□□□□ 0.54
TRAPPC9-205ENST00000518839 CASZ1Q86V15 1759 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 SEC24BO95487 1268 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 ITGA6P23229 1130 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 TFCP2Q12800 502 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 CCDC152Q4G0S7 254 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 POTEAQ6S8J7 498 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 CNTROBQ8N137 903 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 SYNE4Q8N205 404 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 DDRGK1Q96HY6 314 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 LRP5O75197 1615 aa18.41■□□□□ 0.54
TRAPPC9-205ENST00000518839 TRIM6-TRIM34B2RNG4 842 aa18.4■□□□□ 0.54
TRAPPC9-205ENST00000518839 APBA3O96018 575 aa18.4■□□□□ 0.54
TRAPPC9-205ENST00000518839 TBC1D9BQ66K14 1250 aa18.4■□□□□ 0.54
TRAPPC9-205ENST00000518839 GREM2Q9H772 168 aa18.4■□□□□ 0.54
TRAPPC9-205ENST00000518839 CEP126Q9P2H0 1117 aa18.4■□□□□ 0.54
TRAPPC9-205ENST00000518839 SRP68Q9UHB9 627 aaKnown RBP18.4■□□□□ 0.54
TRAPPC9-205ENST00000518839 AKAP2Q9Y2D5 859 aa18.4■□□□□ 0.54
TRAPPC9-205ENST00000518839 FAM177BA6PVY3 158 aa18.39■□□□□ 0.53
TRAPPC9-205ENST00000518839 MFAP1P55081 439 aaKnown RBP18.39■□□□□ 0.53
TRAPPC9-205ENST00000518839 TSHZ3Q63HK5 1081 aa18.39■□□□□ 0.53
TRAPPC9-205ENST00000518839 ZNF594Q96JF6 807 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC9-205ENST00000518839 PHF14O94880 888 aa18.38■□□□□ 0.53
TRAPPC9-205ENST00000518839 GTF2E1P29083 439 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC9-205ENST00000518839 SLC10A5Q5PT55 438 aa18.38■□□□□ 0.53
TRAPPC9-205ENST00000518839 RILPL2Q969X0 211 aa18.38■□□□□ 0.53
TRAPPC9-205ENST00000518839 TBC1D32Q96NH3 1257 aa18.38■□□□□ 0.53
TRAPPC9-205ENST00000518839 CCDC8Q9H0W5 538 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC9-205ENST00000518839 ZNF609O15014 1411 aa18.38■□□□□ 0.53
TRAPPC9-205ENST00000518839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.37■□□□□ 0.53
TRAPPC9-205ENST00000518839 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
TRAPPC9-205ENST00000518839 LRRC24Q50LG9 513 aa18.37■□□□□ 0.53
TRAPPC9-205ENST00000518839 TPTE2Q6XPS3 522 aa18.37■□□□□ 0.53
TRAPPC9-205ENST00000518839 LDHAL6AQ6ZMR3 332 aa18.37■□□□□ 0.53
TRAPPC9-205ENST00000518839 CARMIL3Q8ND23 1372 aa18.37■□□□□ 0.53
TRAPPC9-205ENST00000518839 BICDL1Q6ZP65 573 aa18.36■□□□□ 0.53
TRAPPC9-205ENST00000518839 NBPF5PQ86XG9 351 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC9-205ENST00000518839 PROM2Q8N271 834 aa18.36■□□□□ 0.53
TRAPPC9-205ENST00000518839 FLAD1Q8NFF5 587 aa18.36■□□□□ 0.53
TRAPPC9-205ENST00000518839 CCDC85AQ96PX6 553 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC9-205ENST00000518839 C22orf23Q9BZE7 217 aa18.36■□□□□ 0.53
TRAPPC9-205ENST00000518839 CNNM1Q9NRU3 951 aa18.36■□□□□ 0.53
TRAPPC9-205ENST00000518839 MROH5Q6ZUA9 1318 aa18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 REC8O95072 547 aa18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 ATP5JP18859 108 aa18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 SF3B3Q15393 1217 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 EVI5LQ96CN4 794 aa18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 CDC5LQ99459 802 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 PUS3Q9BZE2 481 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 DBNLQ9UJU6 430 aaKnown RBP18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 RIPOR2Q9Y4F9 1068 aa18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 SPEF2Q9C093 1822 aa18.35■□□□□ 0.53
TRAPPC9-205ENST00000518839 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
TRAPPC9-205ENST00000518839 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
TRAPPC9-205ENST00000518839 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
TRAPPC9-205ENST00000518839 IPO9Q96P70 1041 aaKnown RBP18.34■□□□□ 0.53
TRAPPC9-205ENST00000518839 RIC1Q4ADV7 1423 aa18.33■□□□□ 0.53
TRAPPC9-205ENST00000518839 ABCC12Q96J65 1359 aa18.33■□□□□ 0.53
TRAPPC9-205ENST00000518839 ARAP2Q8WZ64 1704 aa18.33■□□□□ 0.52
TRAPPC9-205ENST00000518839 HIP1O00291 1037 aa18.33■□□□□ 0.52
TRAPPC9-205ENST00000518839 CHMLP26374 656 aa18.33■□□□□ 0.52
TRAPPC9-205ENST00000518839 METTL24Q5JXM2 366 aa18.33■□□□□ 0.52
TRAPPC9-205ENST00000518839 NEUROD6Q96NK8 337 aa18.33■□□□□ 0.52
TRAPPC9-205ENST00000518839 MPHOSPH8Q99549 860 aa18.33■□□□□ 0.52
TRAPPC9-205ENST00000518839 TLR7Q9NYK1 1049 aaKnown RBP18.33■□□□□ 0.52
TRAPPC9-205ENST00000518839 A0A1B0GUL7 405 aa18.32■□□□□ 0.52
TRAPPC9-205ENST00000518839 EPB41L2O43491 1005 aaKnown RBP18.32■□□□□ 0.52
TRAPPC9-205ENST00000518839 RBM25P49756 843 aaKnown RBP18.32■□□□□ 0.52
TRAPPC9-205ENST00000518839 TICAM2Q86XR7 235 aa18.32■□□□□ 0.52
TRAPPC9-205ENST00000518839 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRAPPC9-205ENST00000518839 NLRP3Q96P20 1036 aa18.32■□□□□ 0.52
TRAPPC9-205ENST00000518839 DBNDD2Q9BQY9 259 aa18.32■□□□□ 0.52
TRAPPC9-205ENST00000518839 RFX7Q2KHR2 1363 aa18.31■□□□□ 0.52
TRAPPC9-205ENST00000518839 NPHP1O15259 732 aa18.31■□□□□ 0.52
TRAPPC9-205ENST00000518839 GYS1P13807 737 aa18.31■□□□□ 0.52
TRAPPC9-205ENST00000518839 NFIXQ14938 502 aa18.31■□□□□ 0.52
TRAPPC9-205ENST00000518839 RUFY2Q8WXA3 655 aa18.31■□□□□ 0.52
TRAPPC9-205ENST00000518839 AKT1S1Q96B36 256 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms