RNA–Protein interactions for RNA: ENST00000518815.1

MTCL1-207, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best) BASIC

Gene MTCL1, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-207ENST00000518815 PHKG2P15735 406 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 AKAP17AQ02040 695 aaKnown RBP11.95□□□□□ -0.5
MTCL1-207ENST00000518815 PALD1Q9ULE6 856 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 PCDH11XQ9BZA7 1347 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 PCDH11YQ9BZA8 1340 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 PLCH1Q4KWH8 1693 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 RRP9O43818 475 aaKnown RBP11.95□□□□□ -0.5
MTCL1-207ENST00000518815 STARD3NLO95772 234 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 PRPF40BQ6NWY9 871 aaKnown RBP11.95□□□□□ -0.5
MTCL1-207ENST00000518815 BLOC1S2Q6QNY1 142 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 LRSAM1Q6UWE0 723 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 UNC5CLQ8IV45 518 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 BOLA2Q9H3K6 86 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 NWD2Q9ULI1 1742 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 A0A087WZG4 1122 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 HS1BP3Q53T59 392 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 ERBB4Q15303 1308 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 MRC1P22897 1456 aa11.95□□□□□ -0.5
MTCL1-207ENST00000518815 CHAF1AQ13111 956 aaPredicted RBP11.94□□□□□ -0.5
MTCL1-207ENST00000518815 STK11IPQ8N1F8 1099 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 SUCLG2Q96I99 432 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 MPHOSPH8Q99549 860 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 CDCA7Q9BWT1 371 aaPredicted RBP11.94□□□□□ -0.5
MTCL1-207ENST00000518815 LSG1Q9H089 658 aaKnown RBP11.94□□□□□ -0.5
MTCL1-207ENST00000518815 BICC1Q9H694 974 aaKnown RBP11.94□□□□□ -0.5
MTCL1-207ENST00000518815 GPTP24298 496 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 CCDC158Q5M9N0 1113 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.94□□□□□ -0.5
MTCL1-207ENST00000518815 JCADQ9P266 1359 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 TTC39AQ5SRH9 613 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 ZCRB1Q8TBF4 217 aaKnown RBP11.94□□□□□ -0.5
MTCL1-207ENST00000518815 CCDC39Q9UFE4 941 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 CCDC171Q6TFL3 1326 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 STX6O43752 255 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 ZSCAN22P10073 491 aaPredicted RBP11.94□□□□□ -0.5
MTCL1-207ENST00000518815 CREBRFQ8IUR6 639 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 NGLY1Q96IV0 654 aa11.94□□□□□ -0.5
MTCL1-207ENST00000518815 EXOC5O00471 708 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 AK2P54819 239 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 STK3Q13188 491 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 GCKRQ14397 625 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 UBE3BQ7Z3V4 1068 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 ZSCAN30Q86W11 494 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 NOL10Q9BSC4 688 aaKnown RBP11.93□□□□□ -0.5
MTCL1-207ENST00000518815 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
MTCL1-207ENST00000518815 MTMR7Q9Y216 660 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 UTYO14607 1347 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 BICD2Q8TD16 824 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 BTG4Q9NY30 223 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 TBC1D2BQ9UPU7 963 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 NEURL1BA8MQ27 555 aa11.93□□□□□ -0.5
MTCL1-207ENST00000518815 THRAP3Q9Y2W1 955 aaKnown RBP11.93□□□□□ -0.5
MTCL1-207ENST00000518815 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
MTCL1-207ENST00000518815 PPP1R9BQ96SB3 815 aa11.92□□□□□ -0.5
MTCL1-207ENST00000518815 RRP12Q5JTH9 1297 aaKnown RBP11.92□□□□□ -0.5
MTCL1-207ENST00000518815 CCDC183Q5T5S1 534 aa11.92□□□□□ -0.5
MTCL1-207ENST00000518815 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
MTCL1-207ENST00000518815 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
MTCL1-207ENST00000518815 SYCE3A1L190 88 aa11.92□□□□□ -0.5
MTCL1-207ENST00000518815 PROSER3Q2NL68 480 aa11.92□□□□□ -0.5
MTCL1-207ENST00000518815 GAS2L3Q86XJ1 694 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 PLBD2Q8NHP8 589 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 NRAPQ86VF7 1730 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 SPATA31A6Q5VVP1 1343 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 UBE2HP62256 183 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 PKP1Q13835 747 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 RUFY3Q7L099 469 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 ERVV-2B6SEH9 535 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 TRIM29Q14134 588 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 UVSSAQ2YD98 709 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 TICAM2Q86XR7 235 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 CCDC83Q8IWF9 413 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 COPRSQ9NQ92 184 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 PRDM10Q9NQV6 1147 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 WNK3Q9BYP7 1800 aa11.91□□□□□ -0.5
MTCL1-207ENST00000518815 KDM6AO15550 1401 aaPredicted RBP11.9□□□□□ -0.5
MTCL1-207ENST00000518815 TPM2P07951 284 aa11.9□□□□□ -0.5
MTCL1-207ENST00000518815 MCM5P33992 734 aa11.9□□□□□ -0.5
MTCL1-207ENST00000518815 KRT85P78386 507 aa11.9□□□□□ -0.5
MTCL1-207ENST00000518815 NMIQ13287 307 aaPredicted RBP11.9□□□□□ -0.5
MTCL1-207ENST00000518815 CREB3L3Q68CJ9 461 aa11.9□□□□□ -0.5
MTCL1-207ENST00000518815 HEG1Q9ULI3 1381 aa11.9□□□□□ -0.5
MTCL1-207ENST00000518815 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
MTCL1-207ENST00000518815 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
MTCL1-207ENST00000518815 F13A1P00488 732 aa11.9□□□□□ -0.5
MTCL1-207ENST00000518815 HMGB1P09429 215 aaKnown RBP11.9□□□□□ -0.5
MTCL1-207ENST00000518815 LARP1BQ659C4 914 aaKnown RBP11.9□□□□□ -0.5
MTCL1-207ENST00000518815 CWC25Q9NXE8 425 aaPredicted RBP11.9□□□□□ -0.5
MTCL1-207ENST00000518815 DISP2A7MBM2 1401 aa11.9□□□□□ -0.51
MTCL1-207ENST00000518815 ERICH2A1L162 156 aa11.89□□□□□ -0.51
MTCL1-207ENST00000518815 CYP27B1O15528 508 aa11.89□□□□□ -0.51
MTCL1-207ENST00000518815 DHX16O60231 1041 aaKnown RBP11.89□□□□□ -0.51
MTCL1-207ENST00000518815 FIBPO43427 364 aa11.89□□□□□ -0.51
MTCL1-207ENST00000518815 GJB2P29033 226 aa11.89□□□□□ -0.51
MTCL1-207ENST00000518815 METTL24Q5JXM2 366 aa11.89□□□□□ -0.51
MTCL1-207ENST00000518815 ZDHHC9Q9Y397 364 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms