RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 FAM129BQ96TA1 746 aa6.59□□□□□ -1.35
VPS13B-207ENST00000518569 ENAMQ9NRM1 1142 aa6.59□□□□□ -1.35
VPS13B-207ENST00000518569 USP20Q9Y2K6 914 aa6.59□□□□□ -1.35
VPS13B-207ENST00000518569 UBAP1LF5GYI3 381 aa6.58□□□□□ -1.36
VPS13B-207ENST00000518569 C2CD2LO14523 706 aa6.58□□□□□ -1.36
VPS13B-207ENST00000518569 CELA2BP08218 269 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-207ENST00000518569 ERCC3P19447 782 aa6.58□□□□□ -1.36
VPS13B-207ENST00000518569 MAPK1P28482 360 aa6.58□□□□□ -1.36
VPS13B-207ENST00000518569 TRIP4Q15650 581 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-207ENST00000518569 NLRP13Q86W25 1043 aa6.58□□□□□ -1.36
VPS13B-207ENST00000518569 ZSCAN29Q8IWY8 852 aaPredicted RBP6.58□□□□□ -1.36
VPS13B-207ENST00000518569 DMRTB1Q96MA1 342 aa6.58□□□□□ -1.36
VPS13B-207ENST00000518569 ASB16Q96NS5 453 aa6.58□□□□□ -1.36
VPS13B-207ENST00000518569 SLC30A3Q99726 388 aa6.58□□□□□ -1.36
VPS13B-207ENST00000518569 GGNBP2Q9H3C7 697 aa6.58□□□□□ -1.36
VPS13B-207ENST00000518569 IGF1RP08069 1367 aa6.57□□□□□ -1.36
VPS13B-207ENST00000518569 MAP3K6O95382 1288 aa6.57□□□□□ -1.36
VPS13B-207ENST00000518569 IGHA2P01877 340 aa6.57□□□□□ -1.36
VPS13B-207ENST00000518569 ARAFP10398 606 aa6.57□□□□□ -1.36
VPS13B-207ENST00000518569 SUZ12Q15022 739 aaKnown RBP6.57□□□□□ -1.36
VPS13B-207ENST00000518569 C8orf34Q49A92 452 aa6.57□□□□□ -1.36
VPS13B-207ENST00000518569 ZNF468Q5VIY5 522 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-207ENST00000518569 KANK3Q6NY19 840 aa6.57□□□□□ -1.36
VPS13B-207ENST00000518569 NEDD1Q8NHV4 660 aa6.57□□□□□ -1.36
VPS13B-207ENST00000518569 PNMA5Q96PV4 448 aa6.57□□□□□ -1.36
VPS13B-207ENST00000518569 PRR12Q9ULL5 1215 aa6.57□□□□□ -1.36
VPS13B-207ENST00000518569 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.57□□□□□ -1.36
VPS13B-207ENST00000518569 SIN3BO75182 1162 aa6.56□□□□□ -1.36
VPS13B-207ENST00000518569 NEFLP07196 543 aa6.56□□□□□ -1.36
VPS13B-207ENST00000518569 GRIN2CQ14957 1233 aa6.56□□□□□ -1.36
VPS13B-207ENST00000518569 TMC7Q7Z402 723 aa6.56□□□□□ -1.36
VPS13B-207ENST00000518569 PODNQ7Z5L7 613 aa6.56□□□□□ -1.36
VPS13B-207ENST00000518569 ALKBH8Q96BT7 664 aaKnown RBP6.56□□□□□ -1.36
VPS13B-207ENST00000518569 SASH3O75995 380 aa6.55□□□□□ -1.36
VPS13B-207ENST00000518569 MFAP1P55081 439 aaKnown RBP6.55□□□□□ -1.36
VPS13B-207ENST00000518569 COL19A1Q14993 1142 aa6.55□□□□□ -1.36
VPS13B-207ENST00000518569 DNAJC14Q6Y2X3 702 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-207ENST00000518569 ZNF438Q7Z4V0 828 aa6.55□□□□□ -1.36
VPS13B-207ENST00000518569 TMC1Q8TDI8 760 aa6.55□□□□□ -1.36
VPS13B-207ENST00000518569 BHMTQ93088 406 aa6.55□□□□□ -1.36
VPS13B-207ENST00000518569 ELP3Q9H9T3 547 aa6.55□□□□□ -1.36
VPS13B-207ENST00000518569 GDF2Q9UK05 429 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-207ENST00000518569 PHF20L1A8MW92 1017 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 RARAP10276 462 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 HOXD8P13378 290 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-207ENST00000518569 NFKB1P19838 968 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 TARSP26639 723 aaKnown RBP6.54□□□□□ -1.36
VPS13B-207ENST00000518569 ADH6P28332 368 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 SOX18P35713 384 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 SYT9Q86SS6 491 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 GOLGA6L1Q8N7Z2 621 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 TNFRSF25Q93038 417 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 PMEPA1Q969W9 287 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 ABI2Q9NYB9 513 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-207ENST00000518569 ZFATQ9P243 1243 aa6.54□□□□□ -1.36
VPS13B-207ENST00000518569 ADARB2-AS1A8MUL3 147 aa6.53□□□□□ -1.36
VPS13B-207ENST00000518569 GPR182O15218 404 aa6.53□□□□□ -1.36
VPS13B-207ENST00000518569 TREHO43280 583 aa6.53□□□□□ -1.36
VPS13B-207ENST00000518569 TNFRSF21O75509 655 aa6.53□□□□□ -1.36
VPS13B-207ENST00000518569 BCRP11274 1271 aa6.53□□□□□ -1.36
VPS13B-207ENST00000518569 PCSK7Q16549 785 aa6.53□□□□□ -1.36
VPS13B-207ENST00000518569 TTC39BQ5VTQ0 682 aaPredicted RBP6.53□□□□□ -1.36
VPS13B-207ENST00000518569 SNX29Q8TEQ0 813 aa6.53□□□□□ -1.36
VPS13B-207ENST00000518569 LRRC4BQ9NT99 713 aa6.53□□□□□ -1.36
VPS13B-207ENST00000518569 TLR7Q9NYK1 1049 aaKnown RBP6.53□□□□□ -1.36
VPS13B-207ENST00000518569 TMEM63CQ9P1W3 806 aa6.53□□□□□ -1.36
VPS13B-207ENST00000518569 CCDC9Q9Y3X0 531 aaKnown RBP6.53□□□□□ -1.36
VPS13B-207ENST00000518569 A6NHS1 94 aa6.52□□□□□ -1.37
VPS13B-207ENST00000518569 PLCB3Q01970 1234 aa6.52□□□□□ -1.37
VPS13B-207ENST00000518569 DSC3Q14574 896 aa6.52□□□□□ -1.37
VPS13B-207ENST00000518569 DHX32Q7L7V1 743 aaKnown RBP6.52□□□□□ -1.37
VPS13B-207ENST00000518569 KRT25Q7Z3Z0 450 aa6.52□□□□□ -1.37
VPS13B-207ENST00000518569 OR13H1Q8NG92 308 aa6.52□□□□□ -1.37
VPS13B-207ENST00000518569 TRPM4Q8TD43 1214 aa6.52□□□□□ -1.37
VPS13B-207ENST00000518569 OXCT2Q9BYC2 517 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-207ENST00000518569 DNAJC25Q9H1X3 360 aa6.52□□□□□ -1.37
VPS13B-207ENST00000518569 KLF15Q9UIH9 416 aa6.52□□□□□ -1.37
VPS13B-207ENST00000518569 CNTNAP5Q8WYK1 1306 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 ANKRD33BA6NCL7 494 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 MMP20O60882 483 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 IGHA1P01876 353 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 PSAPP07602 524 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 NRLP54845 237 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 PCBP4P57723 403 aaKnown RBP6.51□□□□□ -1.37
VPS13B-207ENST00000518569 PLAURQ03405 335 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 SLCO4C1Q6ZQN7 724 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 RAB44Q7Z6P3 723 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-207ENST00000518569 ACDQ96AP0 544 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 MDFIQ99750 246 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 NIF3L1Q9GZT8 377 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 PODXL2Q9NZ53 605 aa6.51□□□□□ -1.37
VPS13B-207ENST00000518569 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
VPS13B-207ENST00000518569 GPLD1P80108 840 aa6.5□□□□□ -1.37
VPS13B-207ENST00000518569 FMR1Q06787 632 aaKnown RBP eCLIP6.5□□□□□ -1.37
VPS13B-207ENST00000518569 BEND7Q8N7W2 519 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-207ENST00000518569 KRTAP4-6Q9BYQ5 205 aa6.5□□□□□ -1.37
VPS13B-207ENST00000518569 ZFYVE28Q9HCC9 887 aa6.5□□□□□ -1.37
VPS13B-207ENST00000518569 GGA1Q9UJY5 639 aa6.5□□□□□ -1.37
VPS13B-207ENST00000518569 ELOA3CA0A087WX78 387 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-207ENST00000518569 ELOA3DA6NLF2 546 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms