RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 SNED1Q8TER0 1413 aa23.79■■□□□ 1.4
HOXA3-203ENST00000518451 PI4KAP2A4QPH2 592 aa23.79■■□□□ 1.4
HOXA3-203ENST00000518451 DPP8Q6V1X1 898 aaPredicted RBP23.79■■□□□ 1.4
HOXA3-203ENST00000518451 GPC2Q8N158 579 aa23.79■■□□□ 1.4
HOXA3-203ENST00000518451 PI4KAP1Q8N8J0 262 aa23.79■■□□□ 1.4
HOXA3-203ENST00000518451 PCCAP05165 728 aaPredicted RBP23.78■■□□□ 1.4
HOXA3-203ENST00000518451 RTFDC1Q9BY42 306 aaPredicted RBP23.78■■□□□ 1.4
HOXA3-203ENST00000518451 WDR90Q96KV7 1748 aa23.78■■□□□ 1.4
HOXA3-203ENST00000518451 NIM1KQ8IY84 436 aa23.77■■□□□ 1.4
HOXA3-203ENST00000518451 PPIP5K2O43314 1243 aa23.76■■□□□ 1.39
HOXA3-203ENST00000518451 HACL1Q9UJ83 578 aa23.76■■□□□ 1.39
HOXA3-203ENST00000518451 ZNF541Q9H0D2 1346 aa23.76■■□□□ 1.39
HOXA3-203ENST00000518451 VAMP4O75379 141 aa23.75■■□□□ 1.39
HOXA3-203ENST00000518451 EXOSC9Q06265 439 aaKnown RBP23.75■■□□□ 1.39
HOXA3-203ENST00000518451 PDE8AO60658 829 aa23.74■■□□□ 1.39
HOXA3-203ENST00000518451 CCDC152Q4G0S7 254 aa23.74■■□□□ 1.39
HOXA3-203ENST00000518451 CHADLQ6NUI6 762 aa23.74■■□□□ 1.39
HOXA3-203ENST00000518451 TAF1DQ9H5J8 278 aaPredicted RBP23.74■■□□□ 1.39
HOXA3-203ENST00000518451 RPS8P62241 208 aaKnown RBP23.73■■□□□ 1.39
HOXA3-203ENST00000518451 FLIIQ13045 1269 aa23.73■■□□□ 1.39
HOXA3-203ENST00000518451 PNMA8AQ86V59 439 aaPredicted RBP23.73■■□□□ 1.39
HOXA3-203ENST00000518451 CEP350Q5VT06 3117 aa23.73■■□□□ 1.39
HOXA3-203ENST00000518451 AOC3Q16853 763 aa23.72■■□□□ 1.39
HOXA3-203ENST00000518451 CELF1Q92879 486 aaKnown RBP23.72■■□□□ 1.39
HOXA3-203ENST00000518451 ZNRF3Q9ULT6 936 aa23.72■■□□□ 1.39
HOXA3-203ENST00000518451 GJA3Q9Y6H8 435 aa23.72■■□□□ 1.39
HOXA3-203ENST00000518451 LMOD1P29536 600 aaPredicted RBP23.71■■□□□ 1.39
HOXA3-203ENST00000518451 FKBP5Q13451 457 aaPredicted RBP23.71■■□□□ 1.39
HOXA3-203ENST00000518451 G2E3Q7L622 706 aa23.71■■□□□ 1.39
HOXA3-203ENST00000518451 LDHDQ86WU2 507 aa23.71■■□□□ 1.39
HOXA3-203ENST00000518451 NSFL1CQ9UNZ2 370 aaKnown RBP23.71■■□□□ 1.39
HOXA3-203ENST00000518451 CDHR2Q9BYE9 1310 aa23.7■■□□□ 1.38
HOXA3-203ENST00000518451 IGKV5-2P06315 115 aa23.7■■□□□ 1.38
HOXA3-203ENST00000518451 EPHX2P34913 555 aa23.7■■□□□ 1.38
HOXA3-203ENST00000518451 KIAA2012Q0VF49 1180 aa23.7■■□□□ 1.38
HOXA3-203ENST00000518451 SLC51AQ86UW1 340 aa23.69■■□□□ 1.38
HOXA3-203ENST00000518451 DNAJC5GQ8N7S2 189 aa23.69■■□□□ 1.38
HOXA3-203ENST00000518451 SPINK5Q9NQ38 1064 aaPredicted RBP23.69■■□□□ 1.38
HOXA3-203ENST00000518451 NEURL1BA8MQ27 555 aa23.68■■□□□ 1.38
HOXA3-203ENST00000518451 WASHC4Q2M389 1173 aa23.68■■□□□ 1.38
HOXA3-203ENST00000518451 EAPPQ56P03 285 aaPredicted RBP23.68■■□□□ 1.38
HOXA3-203ENST00000518451 DNAAF4Q8WXU2 420 aa23.68■■□□□ 1.38
HOXA3-203ENST00000518451 CLEC11AQ9Y240 323 aa23.68■■□□□ 1.38
HOXA3-203ENST00000518451 C6orf229H3BNL8 230 aa23.67■■□□□ 1.38
HOXA3-203ENST00000518451 TNIP1Q15025 636 aa23.67■■□□□ 1.38
HOXA3-203ENST00000518451 JARID2Q92833 1246 aaPredicted RBP23.67■■□□□ 1.38
HOXA3-203ENST00000518451 EYA3Q99504 573 aa23.67■■□□□ 1.38
HOXA3-203ENST00000518451 LAMB2P55268 1798 aa23.67■■□□□ 1.38
HOXA3-203ENST00000518451 CWF19L2Q2TBE0 894 aaKnown RBP23.66■■□□□ 1.38
HOXA3-203ENST00000518451 LINS1Q8NG48 757 aa23.66■■□□□ 1.38
HOXA3-203ENST00000518451 SCN4AP35499 1836 aa23.66■■□□□ 1.38
HOXA3-203ENST00000518451 DDX60Q8IY21 1712 aaKnown RBP23.65■■□□□ 1.38
HOXA3-203ENST00000518451 H7C1W4 665 aa23.65■■□□□ 1.38
HOXA3-203ENST00000518451 CXCL9Q07325 125 aa23.65■■□□□ 1.38
HOXA3-203ENST00000518451 GCKRQ14397 625 aa23.65■■□□□ 1.38
HOXA3-203ENST00000518451 ANKRD18AQ8IVF6 992 aa23.65■■□□□ 1.38
HOXA3-203ENST00000518451 CDC5LQ99459 802 aaKnown RBP23.65■■□□□ 1.38
HOXA3-203ENST00000518451 SEC31BQ9NQW1 1179 aa23.65■■□□□ 1.38
HOXA3-203ENST00000518451 POTEIP0CG38 1075 aa23.64■■□□□ 1.37
HOXA3-203ENST00000518451 POTEJP0CG39 1038 aa23.64■■□□□ 1.37
HOXA3-203ENST00000518451 CTSWP56202 376 aa23.64■■□□□ 1.37
HOXA3-203ENST00000518451 GPSM2P81274 684 aa23.64■■□□□ 1.37
HOXA3-203ENST00000518451 CIAPIN1Q6FI81 312 aa23.64■■□□□ 1.37
HOXA3-203ENST00000518451 ZNF521Q96K83 1311 aa23.63■■□□□ 1.37
HOXA3-203ENST00000518451 CCER2I3L3R5 266 aa23.63■■□□□ 1.37
HOXA3-203ENST00000518451 TTLL11Q8NHH1 800 aa23.63■■□□□ 1.37
HOXA3-203ENST00000518451 KLRG1Q96E93 195 aa23.63■■□□□ 1.37
HOXA3-203ENST00000518451 CCDC85AQ96PX6 553 aaPredicted RBP23.63■■□□□ 1.37
HOXA3-203ENST00000518451 PODXL2Q9NZ53 605 aa23.63■■□□□ 1.37
HOXA3-203ENST00000518451 ANKIB1Q9P2G1 1089 aa23.63■■□□□ 1.37
HOXA3-203ENST00000518451 E9PSI1 815 aa23.62■■□□□ 1.37
HOXA3-203ENST00000518451 HTRA3P83110 453 aa23.62■■□□□ 1.37
HOXA3-203ENST00000518451 USP50Q70EL3 339 aaPredicted RBP23.62■■□□□ 1.37
HOXA3-203ENST00000518451 UBE3BQ7Z3V4 1068 aa23.62■■□□□ 1.37
HOXA3-203ENST00000518451 ZC3H12CQ9C0D7 883 aaKnown RBP23.62■■□□□ 1.37
HOXA3-203ENST00000518451 POLLQ9UGP5 575 aa23.62■■□□□ 1.37
HOXA3-203ENST00000518451 COL4A5P29400 1685 aa23.62■■□□□ 1.37
HOXA3-203ENST00000518451 SCNN1DP51172 638 aa23.61■■□□□ 1.37
HOXA3-203ENST00000518451 TBC1D16Q8TBP0 767 aa23.61■■□□□ 1.37
HOXA3-203ENST00000518451 RIMBP2O15034 1052 aa23.6■■□□□ 1.37
HOXA3-203ENST00000518451 EPS15P42566 896 aa23.6■■□□□ 1.37
HOXA3-203ENST00000518451 BCL2L13Q9BXK5 485 aa23.6■■□□□ 1.37
HOXA3-203ENST00000518451 GGA1Q9UJY5 639 aa23.6■■□□□ 1.37
HOXA3-203ENST00000518451 G3V3G9 751 aa23.59■■□□□ 1.37
HOXA3-203ENST00000518451 RAD17O75943 681 aa23.59■■□□□ 1.37
HOXA3-203ENST00000518451 DCAF8Q5TAQ9 597 aa23.59■■□□□ 1.37
HOXA3-203ENST00000518451 PLA2G12BQ9BX93 195 aa23.59■■□□□ 1.37
HOXA3-203ENST00000518451 CREBZFQ9NS37 354 aa23.59■■□□□ 1.37
HOXA3-203ENST00000518451 ADARB2Q9NS39 739 aaKnown RBP23.59■■□□□ 1.37
HOXA3-203ENST00000518451 GPRC5DQ9NZD1 345 aa23.59■■□□□ 1.37
HOXA3-203ENST00000518451 RTL9Q8NET4 1388 aa23.58■■□□□ 1.37
HOXA3-203ENST00000518451 CNTROBQ8N137 903 aa23.58■■□□□ 1.37
HOXA3-203ENST00000518451 BSDC1Q9NW68 430 aaPredicted RBP23.58■■□□□ 1.37
HOXA3-203ENST00000518451 UFL1O94874 794 aa23.57■■□□□ 1.36
HOXA3-203ENST00000518451 ITGBL1O95965 494 aaPredicted RBP23.57■■□□□ 1.36
HOXA3-203ENST00000518451 GMPSP49915 693 aaPredicted RBP23.57■■□□□ 1.36
HOXA3-203ENST00000518451 GREM2Q9H772 168 aa23.57■■□□□ 1.36
HOXA3-203ENST00000518451 CACNA1FO60840 1977 aa23.57■■□□□ 1.36
HOXA3-203ENST00000518451 TAF1P21675 1872 aa23.57■■□□□ 1.36
HOXA3-203ENST00000518451 XDHP47989 1333 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms