RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 GCKRQ14397 625 aa23.76■■□□□ 1.39
FAM49B-208ENST00000518344 DPY19L2Q6NUT2 758 aa23.76■■□□□ 1.39
FAM49B-208ENST00000518344 CELF1Q92879 486 aaKnown RBP23.76■■□□□ 1.39
FAM49B-208ENST00000518344 CDHR2Q9BYE9 1310 aa23.76■■□□□ 1.39
FAM49B-208ENST00000518344 GLTPD2A6NH11 291 aa23.75■■□□□ 1.39
FAM49B-208ENST00000518344 IARSP41252 1262 aaKnown RBP23.75■■□□□ 1.39
FAM49B-208ENST00000518344 CCDC152Q4G0S7 254 aa23.75■■□□□ 1.39
FAM49B-208ENST00000518344 UBE3BQ7Z3V4 1068 aa23.75■■□□□ 1.39
FAM49B-208ENST00000518344 SSH1Q8WYL5 1049 aa23.75■■□□□ 1.39
FAM49B-208ENST00000518344 RRAGCQ9HB90 399 aa23.75■■□□□ 1.39
FAM49B-208ENST00000518344 DDX60Q8IY21 1712 aaKnown RBP23.75■■□□□ 1.39
FAM49B-208ENST00000518344 LAMB2P55268 1798 aa23.74■■□□□ 1.39
FAM49B-208ENST00000518344 H7C1W4 665 aa23.74■■□□□ 1.39
FAM49B-208ENST00000518344 C1QTNF8P60827 252 aa23.74■■□□□ 1.39
FAM49B-208ENST00000518344 SLC4A10Q6U841 1118 aa23.74■■□□□ 1.39
FAM49B-208ENST00000518344 BCL2L13Q9BXK5 485 aa23.74■■□□□ 1.39
FAM49B-208ENST00000518344 SEC31BQ9NQW1 1179 aa23.74■■□□□ 1.39
FAM49B-208ENST00000518344 KIF3CO14782 793 aa23.73■■□□□ 1.39
FAM49B-208ENST00000518344 BEND3Q5T5X7 828 aa23.73■■□□□ 1.39
FAM49B-208ENST00000518344 TMC4Q7Z404 712 aa23.73■■□□□ 1.39
FAM49B-208ENST00000518344 CTSWP56202 376 aa23.72■■□□□ 1.39
FAM49B-208ENST00000518344 RPS8P62241 208 aaKnown RBP23.72■■□□□ 1.39
FAM49B-208ENST00000518344 DPP8Q6V1X1 898 aaPredicted RBP23.72■■□□□ 1.39
FAM49B-208ENST00000518344 MPNDQ8N594 471 aa23.72■■□□□ 1.39
FAM49B-208ENST00000518344 SNED1Q8TER0 1413 aa23.72■■□□□ 1.39
FAM49B-208ENST00000518344 JDP2Q8WYK2 163 aa23.71■■□□□ 1.39
FAM49B-208ENST00000518344 ALDH1L2Q3SY69 923 aa23.7■■□□□ 1.38
FAM49B-208ENST00000518344 LARGE2Q8N3Y3 721 aa23.7■■□□□ 1.38
FAM49B-208ENST00000518344 SMC4Q9NTJ3 1288 aa23.7■■□□□ 1.38
FAM49B-208ENST00000518344 CCDC88AQ3V6T2 1871 aa23.7■■□□□ 1.38
FAM49B-208ENST00000518344 CT47B1P0C2W7 299 aaPredicted RBP23.69■■□□□ 1.38
FAM49B-208ENST00000518344 C16orf71Q8IYS4 520 aaPredicted RBP23.69■■□□□ 1.38
FAM49B-208ENST00000518344 SUPT20HQ8NEM7 779 aa23.69■■□□□ 1.38
FAM49B-208ENST00000518344 TTLL11Q8NHH1 800 aa23.69■■□□□ 1.38
FAM49B-208ENST00000518344 PPIP5K2O43314 1243 aa23.68■■□□□ 1.38
FAM49B-208ENST00000518344 DDNO94850 711 aaPredicted RBP23.68■■□□□ 1.38
FAM49B-208ENST00000518344 SRCIN1Q9C0H9 1055 aa23.68■■□□□ 1.38
FAM49B-208ENST00000518344 NSFL1CQ9UNZ2 370 aaKnown RBP23.68■■□□□ 1.38
FAM49B-208ENST00000518344 CACNA1FO60840 1977 aa23.68■■□□□ 1.38
FAM49B-208ENST00000518344 TIAM2Q8IVF5 1701 aa23.67■■□□□ 1.38
FAM49B-208ENST00000518344 PTPRCP08575 1304 aa23.67■■□□□ 1.38
FAM49B-208ENST00000518344 CASP7P55210 303 aa23.67■■□□□ 1.38
FAM49B-208ENST00000518344 AOC3Q16853 763 aa23.67■■□□□ 1.38
FAM49B-208ENST00000518344 GREM2Q9H772 168 aa23.67■■□□□ 1.38
FAM49B-208ENST00000518344 VEGFAP15692 232 aaPredicted RBP23.66■■□□□ 1.38
FAM49B-208ENST00000518344 ANKRD18AQ8IVF6 992 aa23.66■■□□□ 1.38
FAM49B-208ENST00000518344 RTFDC1Q9BY42 306 aaPredicted RBP23.66■■□□□ 1.38
FAM49B-208ENST00000518344 C9orf78Q9NZ63 289 aaPredicted RBP23.66■■□□□ 1.38
FAM49B-208ENST00000518344 TAF1P21675 1872 aa23.65■■□□□ 1.38
FAM49B-208ENST00000518344 FZD9O00144 591 aa23.65■■□□□ 1.38
FAM49B-208ENST00000518344 ALDH1L1O75891 902 aa23.65■■□□□ 1.38
FAM49B-208ENST00000518344 TOMM70O94826 608 aa23.65■■□□□ 1.38
FAM49B-208ENST00000518344 GPSM2P81274 684 aa23.65■■□□□ 1.38
FAM49B-208ENST00000518344 NIM1KQ8IY84 436 aa23.65■■□□□ 1.38
FAM49B-208ENST00000518344 CDC5LQ99459 802 aaKnown RBP23.65■■□□□ 1.38
FAM49B-208ENST00000518344 PLA2G12BQ9BX93 195 aa23.65■■□□□ 1.38
FAM49B-208ENST00000518344 ZNF541Q9H0D2 1346 aa23.64■■□□□ 1.38
FAM49B-208ENST00000518344 GRM8O00222 908 aa23.64■■□□□ 1.37
FAM49B-208ENST00000518344 EIF6P56537 245 aaKnown RBP23.64■■□□□ 1.37
FAM49B-208ENST00000518344 VPS33BQ9H267 617 aa23.64■■□□□ 1.37
FAM49B-208ENST00000518344 COL4A1P02462 1669 aa23.64■■□□□ 1.37
FAM49B-208ENST00000518344 C6orf229H3BNL8 230 aa23.63■■□□□ 1.37
FAM49B-208ENST00000518344 ANKIB1Q9P2G1 1089 aa23.63■■□□□ 1.37
FAM49B-208ENST00000518344 POTECB2RU33 542 aa23.62■■□□□ 1.37
FAM49B-208ENST00000518344 NOB1Q9ULX3 412 aaKnown RBP23.62■■□□□ 1.37
FAM49B-208ENST00000518344 DICER1Q9UPY3 1922 aaKnown RBP23.62■■□□□ 1.37
FAM49B-208ENST00000518344 RIMBP2O15034 1052 aa23.61■■□□□ 1.37
FAM49B-208ENST00000518344 CSF1RP07333 972 aa23.61■■□□□ 1.37
FAM49B-208ENST00000518344 ITGA6P23229 1130 aa23.61■■□□□ 1.37
FAM49B-208ENST00000518344 RARSP54136 660 aaKnown RBP23.61■■□□□ 1.37
FAM49B-208ENST00000518344 KIAA2012Q0VF49 1180 aa23.61■■□□□ 1.37
FAM49B-208ENST00000518344 FAM161AQ3B820 660 aa23.61■■□□□ 1.37
FAM49B-208ENST00000518344 POLLQ9UGP5 575 aa23.61■■□□□ 1.37
FAM49B-208ENST00000518344 CHMP3Q9Y3E7 222 aa23.61■■□□□ 1.37
FAM49B-208ENST00000518344 GJA3Q9Y6H8 435 aa23.61■■□□□ 1.37
FAM49B-208ENST00000518344 FOXO4P98177 505 aa23.6■■□□□ 1.37
FAM49B-208ENST00000518344 WASHC4Q2M389 1173 aa23.6■■□□□ 1.37
FAM49B-208ENST00000518344 RTL9Q8NET4 1388 aa23.6■■□□□ 1.37
FAM49B-208ENST00000518344 COL4A5P29400 1685 aa23.6■■□□□ 1.37
FAM49B-208ENST00000518344 IGHMBP2P38935 993 aaKnown RBP23.59■■□□□ 1.37
FAM49B-208ENST00000518344 TBC1D16Q8TBP0 767 aa23.59■■□□□ 1.37
FAM49B-208ENST00000518344 EPHA10Q5JZY3 1008 aa23.58■■□□□ 1.37
FAM49B-208ENST00000518344 GPC2Q8N158 579 aa23.58■■□□□ 1.37
FAM49B-208ENST00000518344 RBM46Q8TBY0 533 aaKnown RBP23.58■■□□□ 1.37
FAM49B-208ENST00000518344 GPR101Q96P66 508 aaPredicted RBP23.58■■□□□ 1.37
FAM49B-208ENST00000518344 EYA3Q99504 573 aa23.58■■□□□ 1.37
FAM49B-208ENST00000518344 BSDC1Q9NW68 430 aaPredicted RBP23.58■■□□□ 1.37
FAM49B-208ENST00000518344 GGA1Q9UJY5 639 aa23.58■■□□□ 1.37
FAM49B-208ENST00000518344 ZNRF3Q9ULT6 936 aa23.58■■□□□ 1.37
FAM49B-208ENST00000518344 ANKRD18BA2A2Z9 1011 aa23.57■■□□□ 1.36
FAM49B-208ENST00000518344 UFL1O94874 794 aa23.57■■□□□ 1.36
FAM49B-208ENST00000518344 NBPF7P0C2Y1 421 aaPredicted RBP23.57■■□□□ 1.36
FAM49B-208ENST00000518344 LMBR1LQ6UX01 489 aa23.57■■□□□ 1.36
FAM49B-208ENST00000518344 MPHOSPH8Q99549 860 aa23.57■■□□□ 1.36
FAM49B-208ENST00000518344 PODXL2Q9NZ53 605 aa23.57■■□□□ 1.36
FAM49B-208ENST00000518344 ZBED9Q6R2W3 1325 aa23.57■■□□□ 1.36
FAM49B-208ENST00000518344 IQCA1LA6NCM1 817 aa23.56■■□□□ 1.36
FAM49B-208ENST00000518344 BRPF1P55201 1214 aaPredicted RBP23.56■■□□□ 1.36
FAM49B-208ENST00000518344 IFIT5Q13325 482 aaKnown RBP23.56■■□□□ 1.36
FAM49B-208ENST00000518344 L3MBTL3Q96JM7 780 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms