RNA–Protein interactions for RNA: ENST00000518013.5

NSMCE2-204, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-204ENST00000518013 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
NSMCE2-204ENST00000518013 C7orf43Q8WVR3 580 aa16.78■□□□□ 0.28
NSMCE2-204ENST00000518013 TAOK3Q9H2K8 898 aa16.78■□□□□ 0.28
NSMCE2-204ENST00000518013 FER1L6Q2WGJ9 1857 aa16.78■□□□□ 0.28
NSMCE2-204ENST00000518013 BBOX1O75936 387 aa16.77■□□□□ 0.28
NSMCE2-204ENST00000518013 TMC4Q7Z404 712 aa16.77■□□□□ 0.28
NSMCE2-204ENST00000518013 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.28
NSMCE2-204ENST00000518013 ARHGAP45Q92619 1136 aa16.77■□□□□ 0.28
NSMCE2-204ENST00000518013 FRAT1Q92837 279 aaPredicted RBP16.77■□□□□ 0.28
NSMCE2-204ENST00000518013 YTHDC1Q96MU7 727 aaKnown RBP16.77■□□□□ 0.28
NSMCE2-204ENST00000518013 UTRNP46939 3433 aa16.77■□□□□ 0.27
NSMCE2-204ENST00000518013 LTBP3Q9NS15 1303 aa16.76■□□□□ 0.27
NSMCE2-204ENST00000518013 NFKBIEO00221 500 aa16.76■□□□□ 0.27
NSMCE2-204ENST00000518013 BCAR3O75815 825 aa16.76■□□□□ 0.27
NSMCE2-204ENST00000518013 CCT4P50991 539 aaKnown RBP16.76■□□□□ 0.27
NSMCE2-204ENST00000518013 GRIPAP1Q4V328 841 aa16.76■□□□□ 0.27
NSMCE2-204ENST00000518013 CCDC85AQ96PX6 553 aaPredicted RBP16.76■□□□□ 0.27
NSMCE2-204ENST00000518013 RNF181Q9P0P0 153 aa16.76■□□□□ 0.27
NSMCE2-204ENST00000518013 LMNB1P20700 586 aa16.75■□□□□ 0.27
NSMCE2-204ENST00000518013 CASP7P55210 303 aa16.75■□□□□ 0.27
NSMCE2-204ENST00000518013 C9orf131Q5VYM1 1079 aa16.75■□□□□ 0.27
NSMCE2-204ENST00000518013 OLFM4Q6UX06 510 aa16.75■□□□□ 0.27
NSMCE2-204ENST00000518013 PLA2G12BQ9BX93 195 aa16.75■□□□□ 0.27
NSMCE2-204ENST00000518013 ATP6V0A2Q9Y487 856 aa16.75■□□□□ 0.27
NSMCE2-204ENST00000518013 TAF1P21675 1872 aa16.75■□□□□ 0.27
NSMCE2-204ENST00000518013 SBF1O95248 1867 aa16.74■□□□□ 0.27
NSMCE2-204ENST00000518013 FKBP4Q02790 459 aaKnown RBP eCLIP16.74■□□□□ 0.27
NSMCE2-204ENST00000518013 TTLL11Q8NHH1 800 aa16.74■□□□□ 0.27
NSMCE2-204ENST00000518013 CDC5LQ99459 802 aaKnown RBP16.74■□□□□ 0.27
NSMCE2-204ENST00000518013 RPS8P62241 208 aaKnown RBP16.73■□□□□ 0.27
NSMCE2-204ENST00000518013 ZKSCAN2Q63HK3 967 aa16.73■□□□□ 0.27
NSMCE2-204ENST00000518013 ATF7IPQ6VMQ6 1270 aa16.73■□□□□ 0.27
NSMCE2-204ENST00000518013 SP8Q8IXZ3 490 aa16.73■□□□□ 0.27
NSMCE2-204ENST00000518013 CELF1Q92879 486 aaKnown RBP16.73■□□□□ 0.27
NSMCE2-204ENST00000518013 SEC31BQ9NQW1 1179 aa16.73■□□□□ 0.27
NSMCE2-204ENST00000518013 RTL9Q8NET4 1388 aa16.73■□□□□ 0.27
NSMCE2-204ENST00000518013 CCDC88AQ3V6T2 1871 aa16.72■□□□□ 0.27
NSMCE2-204ENST00000518013 ANKRD18AQ8IVF6 992 aa16.72■□□□□ 0.27
NSMCE2-204ENST00000518013 PSMD1Q99460 953 aa16.72■□□□□ 0.27
NSMCE2-204ENST00000518013 GREM2Q9H772 168 aa16.72■□□□□ 0.27
NSMCE2-204ENST00000518013 LRRC37AA6NMS7 1700 aa16.72■□□□□ 0.27
NSMCE2-204ENST00000518013 UTYO14607 1347 aa16.71■□□□□ 0.27
NSMCE2-204ENST00000518013 NBPF7P0C2Y1 421 aaPredicted RBP16.71■□□□□ 0.27
NSMCE2-204ENST00000518013 TRIM27P14373 513 aa16.71■□□□□ 0.27
NSMCE2-204ENST00000518013 FAM161AQ3B820 660 aa16.71■□□□□ 0.27
NSMCE2-204ENST00000518013 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
NSMCE2-204ENST00000518013 CHMP3Q9Y3E7 222 aa16.71■□□□□ 0.27
NSMCE2-204ENST00000518013 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
NSMCE2-204ENST00000518013 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
NSMCE2-204ENST00000518013 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
NSMCE2-204ENST00000518013 CSF1RP07333 972 aa16.7■□□□□ 0.26
NSMCE2-204ENST00000518013 ITGA6P23229 1130 aa16.7■□□□□ 0.26
NSMCE2-204ENST00000518013 FTSJ3Q8IY81 847 aaKnown RBP16.7■□□□□ 0.26
NSMCE2-204ENST00000518013 MPNDQ8N594 471 aa16.7■□□□□ 0.26
NSMCE2-204ENST00000518013 SUPT20HQ8NEM7 779 aa16.7■□□□□ 0.26
NSMCE2-204ENST00000518013 ZNF277Q9NRM2 450 aaPredicted RBP16.7■□□□□ 0.26
NSMCE2-204ENST00000518013 DICER1Q9UPY3 1922 aaKnown RBP16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 ANKRD18BA2A2Z9 1011 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 IGHMBP2P38935 993 aaKnown RBP16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 PRELPP51888 382 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 FOXO4P98177 505 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 SUCLG2Q96I99 432 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 USP44Q9H0E7 712 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 RCAN3Q9UKA8 241 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 HDAC5Q9UQL6 1122 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 COL4A1P02462 1669 aa16.69■□□□□ 0.26
NSMCE2-204ENST00000518013 SPEF2Q9C093 1822 aa16.68■□□□□ 0.26
NSMCE2-204ENST00000518013 UBTFL1P0CB47 393 aaPredicted RBP16.68■□□□□ 0.26
NSMCE2-204ENST00000518013 IARSP41252 1262 aaKnown RBP16.68■□□□□ 0.26
NSMCE2-204ENST00000518013 IFIT5Q13325 482 aaKnown RBP16.68■□□□□ 0.26
NSMCE2-204ENST00000518013 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
NSMCE2-204ENST00000518013 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
NSMCE2-204ENST00000518013 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
NSMCE2-204ENST00000518013 TAF7LQ5H9L4 462 aa16.67■□□□□ 0.26
NSMCE2-204ENST00000518013 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
NSMCE2-204ENST00000518013 ZNF784Q8NCA9 323 aaPredicted RBP16.67■□□□□ 0.26
NSMCE2-204ENST00000518013 MPHOSPH8Q99549 860 aa16.67■□□□□ 0.26
NSMCE2-204ENST00000518013 BICC1Q9H694 974 aaKnown RBP16.67■□□□□ 0.26
NSMCE2-204ENST00000518013 NSFL1CQ9UNZ2 370 aaKnown RBP16.67■□□□□ 0.26
NSMCE2-204ENST00000518013 LARGE2Q8N3Y3 721 aa16.66■□□□□ 0.26
NSMCE2-204ENST00000518013 ZNF526Q8TF50 670 aaPredicted RBP16.66■□□□□ 0.26
NSMCE2-204ENST00000518013 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
NSMCE2-204ENST00000518013 RTFDC1Q9BY42 306 aaPredicted RBP16.66■□□□□ 0.26
NSMCE2-204ENST00000518013 BSDC1Q9NW68 430 aaPredicted RBP16.66■□□□□ 0.26
NSMCE2-204ENST00000518013 ANKIB1Q9P2G1 1089 aa16.66■□□□□ 0.26
NSMCE2-204ENST00000518013 PPIP5K2O43314 1243 aa16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 GNAI3P08754 354 aa16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 MS4A1P11836 297 aa16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 GPSM2P81274 684 aa16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 KAZALD1Q96I82 304 aa16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 VPS33BQ9H267 617 aa16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 GPBP1L1Q9HC44 474 aaPredicted RBP16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 TNNQ9UQP3 1299 aa16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
NSMCE2-204ENST00000518013 C6orf229H3BNL8 230 aa16.64■□□□□ 0.25
NSMCE2-204ENST00000518013 RABL6Q3YEC7 729 aaPredicted RBP16.64■□□□□ 0.25
NSMCE2-204ENST00000518013 EYA3Q99504 573 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms