RNA–Protein interactions for RNA: ENST00000517647.1

TRIM55-205, Transcript of tripartite motif containing 55, humanhuman

TSL 2

Gene TRIM55, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-205ENST00000517647 C3orf67Q6ZVT6 689 aa14.05□□□□□ -0.16
TRIM55-205ENST00000517647 G2E3Q7L622 706 aa14.05□□□□□ -0.16
TRIM55-205ENST00000517647 DDX60Q8IY21 1712 aaKnown RBP14.04□□□□□ -0.16
TRIM55-205ENST00000517647 HCLS1P14317 486 aaPredicted RBP14.04□□□□□ -0.16
TRIM55-205ENST00000517647 SYNE4Q8N205 404 aa14.04□□□□□ -0.16
TRIM55-205ENST00000517647 LINS1Q8NG48 757 aa14.04□□□□□ -0.16
TRIM55-205ENST00000517647 FAM89AQ96GI7 184 aa14.04□□□□□ -0.16
TRIM55-205ENST00000517647 MYD88Q99836 296 aa14.04□□□□□ -0.16
TRIM55-205ENST00000517647 GPBP1L1Q9HC44 474 aaPredicted RBP14.04□□□□□ -0.16
TRIM55-205ENST00000517647 ATP6V0A2Q9Y487 856 aa14.04□□□□□ -0.16
TRIM55-205ENST00000517647 NEURL1BA8MQ27 555 aa14.03□□□□□ -0.16
TRIM55-205ENST00000517647 IRS4O14654 1257 aaPredicted RBP14.03□□□□□ -0.16
TRIM55-205ENST00000517647 BRPF1P55201 1214 aaPredicted RBP14.03□□□□□ -0.16
TRIM55-205ENST00000517647 GRAPQ13588 217 aa14.03□□□□□ -0.16
TRIM55-205ENST00000517647 DDX46Q7L014 1031 aaKnown RBP14.03□□□□□ -0.16
TRIM55-205ENST00000517647 SP8Q8IXZ3 490 aa14.03□□□□□ -0.16
TRIM55-205ENST00000517647 GRAPLQ8TC17 118 aaPredicted RBP14.03□□□□□ -0.16
TRIM55-205ENST00000517647 DNAAF4Q8WXU2 420 aa14.03□□□□□ -0.16
TRIM55-205ENST00000517647 PLA2G12BQ9BX93 195 aa14.03□□□□□ -0.16
TRIM55-205ENST00000517647 RTFDC1Q9BY42 306 aaPredicted RBP14.03□□□□□ -0.16
TRIM55-205ENST00000517647 ABCC4O15439 1325 aa14.03□□□□□ -0.16
TRIM55-205ENST00000517647 CACNA1SQ13698 1873 aa14.03□□□□□ -0.16
TRIM55-205ENST00000517647 CCDC88AQ3V6T2 1871 aa14.02□□□□□ -0.16
TRIM55-205ENST00000517647 RTL9Q8NET4 1388 aa14.02□□□□□ -0.17
TRIM55-205ENST00000517647 KDM2BQ8NHM5 1336 aa14.02□□□□□ -0.17
TRIM55-205ENST00000517647 GLTPD2A6NH11 291 aa14.02□□□□□ -0.17
TRIM55-205ENST00000517647 H7C1W4 665 aa14.02□□□□□ -0.17
TRIM55-205ENST00000517647 PDE8AO60658 829 aa14.02□□□□□ -0.17
TRIM55-205ENST00000517647 FKBP5Q13451 457 aaPredicted RBP14.02□□□□□ -0.17
TRIM55-205ENST00000517647 ALDH1L2Q3SY69 923 aa14.02□□□□□ -0.17
TRIM55-205ENST00000517647 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
TRIM55-205ENST00000517647 KIF3CO14782 793 aa14.01□□□□□ -0.17
TRIM55-205ENST00000517647 PPEF1O14829 653 aaPredicted RBP14.01□□□□□ -0.17
TRIM55-205ENST00000517647 SUPT16HQ9Y5B9 1047 aaKnown RBP14.01□□□□□ -0.17
TRIM55-205ENST00000517647 PTPRCP08575 1304 aa14□□□□□ -0.17
TRIM55-205ENST00000517647 TCERG1O14776 1098 aaKnown RBP14□□□□□ -0.17
TRIM55-205ENST00000517647 CASP7P55210 303 aa14□□□□□ -0.17
TRIM55-205ENST00000517647 GCKRQ14397 625 aa14□□□□□ -0.17
TRIM55-205ENST00000517647 BEND3Q5T5X7 828 aa14□□□□□ -0.17
TRIM55-205ENST00000517647 LRRC37AA6NMS7 1700 aa14□□□□□ -0.17
TRIM55-205ENST00000517647 ZBED9Q6R2W3 1325 aa13.99□□□□□ -0.17
TRIM55-205ENST00000517647 IARSP41252 1262 aaKnown RBP13.99□□□□□ -0.17
TRIM55-205ENST00000517647 C1QTNF8P60827 252 aa13.99□□□□□ -0.17
TRIM55-205ENST00000517647 CCDC152Q4G0S7 254 aa13.99□□□□□ -0.17
TRIM55-205ENST00000517647 DPY19L2Q6NUT2 758 aa13.99□□□□□ -0.17
TRIM55-205ENST00000517647 MRPL50Q8N5N7 158 aaKnown RBP13.99□□□□□ -0.17
TRIM55-205ENST00000517647 SUPT20HQ8NEM7 779 aa13.99□□□□□ -0.17
TRIM55-205ENST00000517647 TMX4Q9H1E5 349 aaPredicted RBP13.99□□□□□ -0.17
TRIM55-205ENST00000517647 TIAM2Q8IVF5 1701 aa13.98□□□□□ -0.17
TRIM55-205ENST00000517647 FZD9O00144 591 aa13.98□□□□□ -0.17
TRIM55-205ENST00000517647 ALDH1L1O75891 902 aa13.98□□□□□ -0.17
TRIM55-205ENST00000517647 RPS8P62241 208 aaKnown RBP13.98□□□□□ -0.17
TRIM55-205ENST00000517647 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRIM55-205ENST00000517647 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
TRIM55-205ENST00000517647 CDCA7LQ96GN5 454 aa13.98□□□□□ -0.17
TRIM55-205ENST00000517647 L3MBTL3Q96JM7 780 aaPredicted RBP13.98□□□□□ -0.17
TRIM55-205ENST00000517647 WDR90Q96KV7 1748 aa13.98□□□□□ -0.17
TRIM55-205ENST00000517647 CSF1RP07333 972 aa13.97□□□□□ -0.17
TRIM55-205ENST00000517647 CTSWP56202 376 aa13.97□□□□□ -0.17
TRIM55-205ENST00000517647 CWF19L2Q2TBE0 894 aaKnown RBP13.97□□□□□ -0.17
TRIM55-205ENST00000517647 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
TRIM55-205ENST00000517647 TTLL11Q8NHH1 800 aa13.97□□□□□ -0.17
TRIM55-205ENST00000517647 PODXL2Q9NZ53 605 aa13.97□□□□□ -0.17
TRIM55-205ENST00000517647 MYH3P11055 1940 aa13.96□□□□□ -0.17
TRIM55-205ENST00000517647 TOMM70O94826 608 aa13.96□□□□□ -0.17
TRIM55-205ENST00000517647 SSH1Q8WYL5 1049 aa13.96□□□□□ -0.17
TRIM55-205ENST00000517647 CELF1Q92879 486 aaKnown RBP13.96□□□□□ -0.17
TRIM55-205ENST00000517647 ZNF277Q9NRM2 450 aaPredicted RBP13.96□□□□□ -0.17
TRIM55-205ENST00000517647 UTYO14607 1347 aa13.95□□□□□ -0.18
TRIM55-205ENST00000517647 ZBTB22O15209 634 aa13.95□□□□□ -0.18
TRIM55-205ENST00000517647 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
TRIM55-205ENST00000517647 MPNDQ8N594 471 aa13.95□□□□□ -0.18
TRIM55-205ENST00000517647 RBM46Q8TBY0 533 aaKnown RBP13.95□□□□□ -0.18
TRIM55-205ENST00000517647 NMRK2Q9NPI5 230 aa13.95□□□□□ -0.18
TRIM55-205ENST00000517647 POTECB2RU33 542 aa13.94□□□□□ -0.18
TRIM55-205ENST00000517647 KIAA2012Q0VF49 1180 aa13.94□□□□□ -0.18
TRIM55-205ENST00000517647 LTBP1Q14766 1721 aa13.94□□□□□ -0.18
TRIM55-205ENST00000517647 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
TRIM55-205ENST00000517647 DPP8Q6V1X1 898 aaPredicted RBP13.94□□□□□ -0.18
TRIM55-205ENST00000517647 UBE3BQ7Z3V4 1068 aa13.94□□□□□ -0.18
TRIM55-205ENST00000517647 PIP4P2Q8N4L2 257 aa13.94□□□□□ -0.18
TRIM55-205ENST00000517647 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
TRIM55-205ENST00000517647 CDC5LQ99459 802 aaKnown RBP13.94□□□□□ -0.18
TRIM55-205ENST00000517647 DUOX1Q9NRD9 1551 aa13.93□□□□□ -0.18
TRIM55-205ENST00000517647 F6X3S4 739 aa13.93□□□□□ -0.18
TRIM55-205ENST00000517647 GRM8O00222 908 aa13.93□□□□□ -0.18
TRIM55-205ENST00000517647 ZNF526Q8TF50 670 aaPredicted RBP13.93□□□□□ -0.18
TRIM55-205ENST00000517647 ARHGAP45Q92619 1136 aa13.93□□□□□ -0.18
TRIM55-205ENST00000517647 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
TRIM55-205ENST00000517647 BSDC1Q9NW68 430 aaPredicted RBP13.93□□□□□ -0.18
TRIM55-205ENST00000517647 TAF1P21675 1872 aa13.93□□□□□ -0.18
TRIM55-205ENST00000517647 SCN4AP35499 1836 aa13.92□□□□□ -0.18
TRIM55-205ENST00000517647 FSTL1Q12841 308 aa13.92□□□□□ -0.18
TRIM55-205ENST00000517647 ANKRD18AQ8IVF6 992 aa13.92□□□□□ -0.18
TRIM55-205ENST00000517647 GPC2Q8N158 579 aa13.92□□□□□ -0.18
TRIM55-205ENST00000517647 LARGE2Q8N3Y3 721 aa13.92□□□□□ -0.18
TRIM55-205ENST00000517647 SEC31BQ9NQW1 1179 aa13.92□□□□□ -0.18
TRIM55-205ENST00000517647 COL4A5P29400 1685 aa13.91□□□□□ -0.18
TRIM55-205ENST00000517647 IQCA1LA6NCM1 817 aa13.91□□□□□ -0.18
TRIM55-205ENST00000517647 RARSP54136 660 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms