RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 SLC35F4A4IF30 521 aa8.58□□□□□ -1.04
CTNNA1-202ENST00000517533 EFSO43281 561 aa8.58□□□□□ -1.04
CTNNA1-202ENST00000517533 FANCCQ00597 558 aa8.58□□□□□ -1.04
CTNNA1-202ENST00000517533 PTSQ03393 145 aa8.58□□□□□ -1.04
CTNNA1-202ENST00000517533 TMEM87AQ8NBN3 555 aa8.58□□□□□ -1.04
CTNNA1-202ENST00000517533 GJA3Q9Y6H8 435 aa8.58□□□□□ -1.04
CTNNA1-202ENST00000517533 AK5Q9Y6K8 562 aa8.58□□□□□ -1.04
CTNNA1-202ENST00000517533 SCAMP3O14828 347 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-202ENST00000517533 MAN1A2O60476 641 aa8.57□□□□□ -1.04
CTNNA1-202ENST00000517533 KCNQ4P56696 695 aa8.57□□□□□ -1.04
CTNNA1-202ENST00000517533 DBN1Q16643 649 aa8.57□□□□□ -1.04
CTNNA1-202ENST00000517533 TTC16Q8NEE8 873 aa8.57□□□□□ -1.04
CTNNA1-202ENST00000517533 MRS2Q9HD23 443 aa8.57□□□□□ -1.04
CTNNA1-202ENST00000517533 NPHS2Q9NP85 383 aa8.57□□□□□ -1.04
CTNNA1-202ENST00000517533 ZFATQ9P243 1243 aa8.57□□□□□ -1.04
CTNNA1-202ENST00000517533 FNDC3AQ9Y2H6 1198 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-202ENST00000517533 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-202ENST00000517533 DCDC2BA2VCK2 349 aa8.56□□□□□ -1.04
CTNNA1-202ENST00000517533 PHACTR2O75167 634 aa8.56□□□□□ -1.04
CTNNA1-202ENST00000517533 SASH3O75995 380 aa8.56□□□□□ -1.04
CTNNA1-202ENST00000517533 TARSP26639 723 aaKnown RBP8.56□□□□□ -1.04
CTNNA1-202ENST00000517533 GSX2Q9BZM3 304 aa8.56□□□□□ -1.04
CTNNA1-202ENST00000517533 LATS2Q9NRM7 1088 aa8.56□□□□□ -1.04
CTNNA1-202ENST00000517533 NDFIP2Q9NV92 336 aa8.56□□□□□ -1.04
CTNNA1-202ENST00000517533 FAM157BP0CG42 384 aa8.55□□□□□ -1.04
CTNNA1-202ENST00000517533 VEGFBP49765 207 aa8.55□□□□□ -1.04
CTNNA1-202ENST00000517533 TNP2Q05952 138 aa8.55□□□□□ -1.04
CTNNA1-202ENST00000517533 RIPOR1Q6ZS17 1223 aa8.55□□□□□ -1.04
CTNNA1-202ENST00000517533 KRT25Q7Z3Z0 450 aa8.55□□□□□ -1.04
CTNNA1-202ENST00000517533 NLRP13Q86W25 1043 aa8.55□□□□□ -1.04
CTNNA1-202ENST00000517533 PGBD3Q8N328 593 aa8.55□□□□□ -1.04
CTNNA1-202ENST00000517533 KCNH4Q9UQ05 1017 aa8.55□□□□□ -1.04
CTNNA1-202ENST00000517533 ATXN7O15265 892 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-202ENST00000517533 BNIP3LO60238 219 aa8.54□□□□□ -1.04
CTNNA1-202ENST00000517533 FGD1P98174 961 aa8.54□□□□□ -1.04
CTNNA1-202ENST00000517533 GALNT12Q8IXK2 581 aa8.54□□□□□ -1.04
CTNNA1-202ENST00000517533 ABI2Q9NYB9 513 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-202ENST00000517533 KANSL3Q9P2N6 904 aa8.54□□□□□ -1.04
CTNNA1-202ENST00000517533 MMP20O60882 483 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 NEFLP07196 543 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 MAPTP10636 758 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 EPB42P16452 691 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 ERCC5P28715 1186 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 EFHC2Q5JST6 749 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 COL13A1Q5TAT6 717 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 MEI1Q5TIA1 1274 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 PEAR1Q5VY43 1037 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 NT5DC4Q86YG4 428 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 CCDC155Q8N6L0 562 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 SLC30A3Q99726 388 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 C12orf49Q9H741 205 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 PCDHGC4Q9Y5F7 938 aa8.53□□□□□ -1.04
CTNNA1-202ENST00000517533 KHNYNO15037 678 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-202ENST00000517533 PPM1GO15355 546 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-202ENST00000517533 ACPPP15309 386 aa8.52□□□□□ -1.05
CTNNA1-202ENST00000517533 NXPE4Q6UWF7 544 aa8.52□□□□□ -1.05
CTNNA1-202ENST00000517533 GLIS3Q8NEA6 775 aa8.52□□□□□ -1.05
CTNNA1-202ENST00000517533 CRELD1Q96HD1 420 aa8.52□□□□□ -1.05
CTNNA1-202ENST00000517533 NUCKS1Q9H1E3 243 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-202ENST00000517533 SPG7Q9UQ90 795 aa8.52□□□□□ -1.05
CTNNA1-202ENST00000517533 LCE2BO14633 110 aa8.51□□□□□ -1.05
CTNNA1-202ENST00000517533 EIF4BP23588 611 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-202ENST00000517533 GRM2Q14416 872 aa8.51□□□□□ -1.05
CTNNA1-202ENST00000517533 RAB44Q7Z6P3 723 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-202ENST00000517533 ABHD17AQ96GS6 310 aa8.51□□□□□ -1.05
CTNNA1-202ENST00000517533 DRC1Q96MC2 740 aa8.51□□□□□ -1.05
CTNNA1-202ENST00000517533 C8orf37Q96NL8 207 aa8.51□□□□□ -1.05
CTNNA1-202ENST00000517533 BCO2Q9BYV7 579 aa8.51□□□□□ -1.05
CTNNA1-202ENST00000517533 SMARCA5O60264 1052 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-202ENST00000517533 SNRPBP14678 240 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-202ENST00000517533 CCINQ13939 588 aa8.5□□□□□ -1.05
CTNNA1-202ENST00000517533 LBRQ14739 615 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-202ENST00000517533 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-202ENST00000517533 FRMD6Q96NE9 622 aa8.5□□□□□ -1.05
CTNNA1-202ENST00000517533 C11orf16Q9NQ32 467 aa8.5□□□□□ -1.05
CTNNA1-202ENST00000517533 GMPR2Q9P2T1 348 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-202ENST00000517533 SALL4Q9UJQ4 1053 aa8.5□□□□□ -1.05
CTNNA1-202ENST00000517533 A0A1W2PP55 124 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 USP17L7P0C7H9 530 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 NFKB1P19838 968 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 CD33P20138 364 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 CES1P23141 567 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 ZNF76P36508 570 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 ZC3H6P61129 1189 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 NAALADL2Q58DX5 795 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 TRIM22Q8IYM9 498 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 OR13H1Q8NG92 308 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 RNF34Q969K3 372 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 METTL5Q9NRN9 209 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-202ENST00000517533 ZNF394Q53GI3 561 aa8.48□□□□□ -1.05
CTNNA1-202ENST00000517533 TTC39BQ5VTQ0 682 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-202ENST00000517533 FIGNL1Q6PIW4 674 aa8.48□□□□□ -1.05
CTNNA1-202ENST00000517533 SREK1Q8WXA9 508 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-202ENST00000517533 GTPBP3Q969Y2 492 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-202ENST00000517533 TRIM47Q96LD4 638 aa8.48□□□□□ -1.05
CTNNA1-202ENST00000517533 SUV39H2Q9H5I1 410 aa8.48□□□□□ -1.05
CTNNA1-202ENST00000517533 NLRP2Q9NX02 1062 aa8.48□□□□□ -1.05
CTNNA1-202ENST00000517533 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms