RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 CDCA7Q9BWT1 371 aaPredicted RBP23.73■■□□□ 1.39
HOXA11-202ENST00000517402 SPATA31A5Q5VU36 1347 aa23.73■■□□□ 1.39
HOXA11-202ENST00000517402 SPATA31A7Q8IWB4 1347 aa23.73■■□□□ 1.39
HOXA11-202ENST00000517402 CASTP20810 708 aaKnown RBP23.72■■□□□ 1.39
HOXA11-202ENST00000517402 DDX46Q7L014 1031 aaKnown RBP23.72■■□□□ 1.39
HOXA11-202ENST00000517402 ZBTB38Q8NAP3 1195 aaPredicted RBP23.72■■□□□ 1.39
HOXA11-202ENST00000517402 TTC14Q96N46 770 aa23.72■■□□□ 1.39
HOXA11-202ENST00000517402 TBC1D2BQ9UPU7 963 aa23.72■■□□□ 1.39
HOXA11-202ENST00000517402 THRAP3Q9Y2W1 955 aaKnown RBP23.72■■□□□ 1.39
HOXA11-202ENST00000517402 ZDHHC9Q9Y397 364 aa23.72■■□□□ 1.39
HOXA11-202ENST00000517402 RBM8AQ9Y5S9 174 aaKnown RBP23.72■■□□□ 1.39
HOXA11-202ENST00000517402 TOM1O60784 492 aa23.72■■□□□ 1.39
HOXA11-202ENST00000517402 NLRP10Q86W26 655 aa23.72■■□□□ 1.39
HOXA11-202ENST00000517402 SLIT2O94813 1529 aa23.72■■□□□ 1.39
HOXA11-202ENST00000517402 NWD2Q9ULI1 1742 aa23.71■■□□□ 1.39
HOXA11-202ENST00000517402 BAG4O95429 457 aaKnown RBP23.71■■□□□ 1.39
HOXA11-202ENST00000517402 CCDC57Q2TAC2 916 aa23.71■■□□□ 1.39
HOXA11-202ENST00000517402 AK2P54819 239 aa23.71■■□□□ 1.39
HOXA11-202ENST00000517402 NECTIN1Q15223 517 aa23.71■■□□□ 1.39
HOXA11-202ENST00000517402 HAUS7Q99871 368 aa23.71■■□□□ 1.39
HOXA11-202ENST00000517402 KCNJ4P48050 445 aa23.7■■□□□ 1.38
HOXA11-202ENST00000517402 MAP4K1Q92918 833 aa23.7■■□□□ 1.38
HOXA11-202ENST00000517402 JAKMIP1Q96N16 626 aaKnown RBP23.7■■□□□ 1.38
HOXA11-202ENST00000517402 SNRKQ9NRH2 765 aa23.7■■□□□ 1.38
HOXA11-202ENST00000517402 COL9A3Q14050 684 aaPredicted RBP23.69■■□□□ 1.38
HOXA11-202ENST00000517402 DZIP3Q86Y13 1208 aaKnown RBP23.69■■□□□ 1.38
HOXA11-202ENST00000517402 A0A1B0GUL7 405 aa23.69■■□□□ 1.38
HOXA11-202ENST00000517402 FOXD4L5Q5VV16 416 aaPredicted RBP23.69■■□□□ 1.38
HOXA11-202ENST00000517402 CLEC17AQ6ZS10 378 aa23.69■■□□□ 1.38
HOXA11-202ENST00000517402 FOXD4L4Q8WXT5 416 aaPredicted RBP23.69■■□□□ 1.38
HOXA11-202ENST00000517402 CIAO1O76071 339 aa23.68■■□□□ 1.38
HOXA11-202ENST00000517402 CREB3L3Q68CJ9 461 aa23.68■■□□□ 1.38
HOXA11-202ENST00000517402 CHAMP1Q96JM3 812 aa23.68■■□□□ 1.38
HOXA11-202ENST00000517402 RUFY3Q7L099 469 aa23.68■■□□□ 1.38
HOXA11-202ENST00000517402 SEC62Q99442 399 aaKnown RBP23.68■■□□□ 1.38
HOXA11-202ENST00000517402 PLA2G12BQ9BX93 195 aa23.68■■□□□ 1.38
HOXA11-202ENST00000517402 GPR108Q9NPR9 543 aa23.68■■□□□ 1.38
HOXA11-202ENST00000517402 TAF6LQ9Y6J9 622 aa23.68■■□□□ 1.38
HOXA11-202ENST00000517402 MYH3P11055 1940 aa23.67■■□□□ 1.38
HOXA11-202ENST00000517402 UBN2Q6ZU65 1347 aa23.67■■□□□ 1.38
HOXA11-202ENST00000517402 IL6STP40189 918 aaPredicted RBP23.67■■□□□ 1.38
HOXA11-202ENST00000517402 CCDC129Q6ZRS4 1044 aa23.67■■□□□ 1.38
HOXA11-202ENST00000517402 KCNB2Q92953 911 aa23.67■■□□□ 1.38
HOXA11-202ENST00000517402 GOLIM4O00461 696 aa23.66■■□□□ 1.38
HOXA11-202ENST00000517402 ATP6V1AP38606 617 aa23.66■■□□□ 1.38
HOXA11-202ENST00000517402 SLFNL1Q499Z3 407 aa23.66■■□□□ 1.38
HOXA11-202ENST00000517402 INTS4Q96HW7 963 aaKnown RBP23.66■■□□□ 1.38
HOXA11-202ENST00000517402 CSF1RP07333 972 aa23.66■■□□□ 1.38
HOXA11-202ENST00000517402 MCTP1Q6DN14 999 aa23.66■■□□□ 1.38
HOXA11-202ENST00000517402 JCADQ9P266 1359 aa23.66■■□□□ 1.38
HOXA11-202ENST00000517402 SLC27A2O14975 620 aa23.65■■□□□ 1.38
HOXA11-202ENST00000517402 IFIT5Q13325 482 aaKnown RBP23.65■■□□□ 1.38
HOXA11-202ENST00000517402 HSP90AB3PQ58FF7 597 aa23.65■■□□□ 1.38
HOXA11-202ENST00000517402 TAF7LQ5H9L4 462 aa23.65■■□□□ 1.38
HOXA11-202ENST00000517402 GREM2Q9H772 168 aa23.65■■□□□ 1.38
HOXA11-202ENST00000517402 CEP126Q9P2H0 1117 aa23.65■■□□□ 1.38
HOXA11-202ENST00000517402 TRMT112Q9UI30 125 aaKnown RBP23.65■■□□□ 1.38
HOXA11-202ENST00000517402 CDHR2Q9BYE9 1310 aa23.65■■□□□ 1.38
HOXA11-202ENST00000517402 MYH14Q7Z406 1995 aaKnown RBP23.65■■□□□ 1.38
HOXA11-202ENST00000517402 KCNQ2O43526 872 aa23.65■■□□□ 1.38
HOXA11-202ENST00000517402 LARGE1O95461 756 aa23.65■■□□□ 1.38
HOXA11-202ENST00000517402 ZKSCAN1P17029 563 aaPredicted RBP23.65■■□□□ 1.38
HOXA11-202ENST00000517402 LOC102724428A0A0B4J2F2 783 aa23.64■■□□□ 1.37
HOXA11-202ENST00000517402 TAF5LO75529 589 aa23.64■■□□□ 1.37
HOXA11-202ENST00000517402 CRKLP46109 303 aaKnown RBP23.64■■□□□ 1.37
HOXA11-202ENST00000517402 SIK1P57059 783 aa23.64■■□□□ 1.37
HOXA11-202ENST00000517402 ITPK1Q13572 414 aa23.64■■□□□ 1.37
HOXA11-202ENST00000517402 INTS5Q6P9B9 1019 aaKnown RBP23.64■■□□□ 1.37
HOXA11-202ENST00000517402 KBTBD3Q8NAB2 608 aa23.64■■□□□ 1.37
HOXA11-202ENST00000517402 TTLL11Q8NHH1 800 aa23.64■■□□□ 1.37
HOXA11-202ENST00000517402 PAG1Q9NWQ8 432 aa23.64■■□□□ 1.37
HOXA11-202ENST00000517402 RFX7Q2KHR2 1363 aa23.64■■□□□ 1.37
HOXA11-202ENST00000517402 RIC1Q4ADV7 1423 aa23.64■■□□□ 1.37
HOXA11-202ENST00000517402 ADORA1P30542 326 aa23.63■■□□□ 1.37
HOXA11-202ENST00000517402 FAM98CQ17RN3 349 aaKnown RBP23.63■■□□□ 1.37
HOXA11-202ENST00000517402 BARGINQ6ZT62 677 aa23.63■■□□□ 1.37
HOXA11-202ENST00000517402 ZSWIM6Q9HCJ5 1215 aa23.63■■□□□ 1.37
HOXA11-202ENST00000517402 IRS4O14654 1257 aaPredicted RBP23.63■■□□□ 1.37
HOXA11-202ENST00000517402 ITGA6P23229 1130 aa23.63■■□□□ 1.37
HOXA11-202ENST00000517402 CTSWP56202 376 aa23.63■■□□□ 1.37
HOXA11-202ENST00000517402 C8orf37Q96NL8 207 aa23.63■■□□□ 1.37
HOXA11-202ENST00000517402 PDRG1Q9NUG6 133 aa23.63■■□□□ 1.37
HOXA11-202ENST00000517402 PALLDQ8WX93 1383 aa23.62■■□□□ 1.37
HOXA11-202ENST00000517402 RPAP1Q9BWH6 1393 aaPredicted RBP23.62■■□□□ 1.37
HOXA11-202ENST00000517402 GOLGA6L22H0YM25 854 aa23.62■■□□□ 1.37
HOXA11-202ENST00000517402 EIF5P55010 431 aaKnown RBP23.62■■□□□ 1.37
HOXA11-202ENST00000517402 CCDC87Q9NVE4 849 aa23.62■■□□□ 1.37
HOXA11-202ENST00000517402 CYP46A1Q9Y6A2 500 aa23.62■■□□□ 1.37
HOXA11-202ENST00000517402 DTNBO60941 627 aa23.62■■□□□ 1.37
HOXA11-202ENST00000517402 IFIT1P09914 478 aaKnown RBP23.62■■□□□ 1.37
HOXA11-202ENST00000517402 LIMCH1Q9UPQ0 1083 aa23.62■■□□□ 1.37
HOXA11-202ENST00000517402 ERVV-1B6SEH8 477 aa23.61■■□□□ 1.37
HOXA11-202ENST00000517402 TM6SF1Q9BZW5 370 aa23.61■■□□□ 1.37
HOXA11-202ENST00000517402 FAM177BA6PVY3 158 aa23.6■■□□□ 1.37
HOXA11-202ENST00000517402 VPS53Q5VIR6 699 aa23.6■■□□□ 1.37
HOXA11-202ENST00000517402 TCEANC2Q96MN5 208 aa23.6■■□□□ 1.37
HOXA11-202ENST00000517402 BRD1O95696 1058 aa23.6■■□□□ 1.37
HOXA11-202ENST00000517402 ZNF34Q8IZ26 560 aa23.6■■□□□ 1.37
HOXA11-202ENST00000517402 XAGE2Q96GT9 111 aa23.6■■□□□ 1.37
HOXA11-202ENST00000517402 CERKQ8TCT0 537 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms