RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 NPM2Q86SE8 214 aaKnown RBP7.4□□□□□ -1.22
LINC00534-201ENST00000517400 NLRP13Q86W25 1043 aa7.4□□□□□ -1.22
LINC00534-201ENST00000517400 VWA5B2Q8N398 1253 aa7.4□□□□□ -1.22
LINC00534-201ENST00000517400 TRERF1Q96PN7 1200 aa7.4□□□□□ -1.22
LINC00534-201ENST00000517400 ELP3Q9H9T3 547 aa7.4□□□□□ -1.22
LINC00534-201ENST00000517400 NXF1Q9UBU9 619 aaKnown RBP7.4□□□□□ -1.22
LINC00534-201ENST00000517400 ZNF16P17020 682 aaPredicted RBP7.39□□□□□ -1.23
LINC00534-201ENST00000517400 FGD1P98174 961 aa7.39□□□□□ -1.23
LINC00534-201ENST00000517400 ENOX2Q16206 610 aaKnown RBP7.39□□□□□ -1.23
LINC00534-201ENST00000517400 ZNF326Q5BKZ1 582 aaKnown RBP7.39□□□□□ -1.23
LINC00534-201ENST00000517400 DNAJC25Q9H1X3 360 aa7.39□□□□□ -1.23
LINC00534-201ENST00000517400 CDC14CA4D256 554 aa7.38□□□□□ -1.23
LINC00534-201ENST00000517400 FGFR3P22607 806 aa7.38□□□□□ -1.23
LINC00534-201ENST00000517400 MAPK8P45983 427 aa7.38□□□□□ -1.23
LINC00534-201ENST00000517400 SNX29Q8TEQ0 813 aa7.38□□□□□ -1.23
LINC00534-201ENST00000517400 GIPC2Q8TF65 315 aa7.38□□□□□ -1.23
LINC00534-201ENST00000517400 CSRNP1Q96S65 589 aa7.38□□□□□ -1.23
LINC00534-201ENST00000517400 TMEM63CQ9P1W3 806 aa7.38□□□□□ -1.23
LINC00534-201ENST00000517400 SASH3O75995 380 aa7.37□□□□□ -1.23
LINC00534-201ENST00000517400 CD33P20138 364 aa7.37□□□□□ -1.23
LINC00534-201ENST00000517400 SPEM2Q0P670 501 aa7.37□□□□□ -1.23
LINC00534-201ENST00000517400 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
LINC00534-201ENST00000517400 ABI2Q9NYB9 513 aaPredicted RBP7.37□□□□□ -1.23
LINC00534-201ENST00000517400 DCAF1Q9Y4B6 1507 aa7.37□□□□□ -1.23
LINC00534-201ENST00000517400 PNMA6FA0A0J9YX94 578 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 GPR25O00155 361 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 EIF1AYO14602 144 aaKnown RBP7.36□□□□□ -1.23
LINC00534-201ENST00000517400 CPNE3O75131 537 aaKnown RBP7.36□□□□□ -1.23
LINC00534-201ENST00000517400 LDHBP07195 334 aaKnown RBP7.36□□□□□ -1.23
LINC00534-201ENST00000517400 TARSP26639 723 aaKnown RBP7.36□□□□□ -1.23
LINC00534-201ENST00000517400 RBM25P49756 843 aaKnown RBP7.36□□□□□ -1.23
LINC00534-201ENST00000517400 TAGLNQ01995 201 aaKnown RBP7.36□□□□□ -1.23
LINC00534-201ENST00000517400 ORC1Q13415 861 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 GRIN2CQ14957 1233 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 TTC39BQ5VTQ0 682 aaPredicted RBP7.36□□□□□ -1.23
LINC00534-201ENST00000517400 ALG1LQ6GMV1 187 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 PMEPA1Q969W9 287 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 SLC30A3Q99726 388 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 ZFYVE28Q9HCC9 887 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 ZFATQ9P243 1243 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 FOXD3Q9UJU5 478 aaPredicted RBP7.36□□□□□ -1.23
LINC00534-201ENST00000517400 ERCC6Q03468 1493 aa7.36□□□□□ -1.23
LINC00534-201ENST00000517400 H3BM21 787 aa7.35□□□□□ -1.23
LINC00534-201ENST00000517400 PHACTR2O75167 634 aa7.35□□□□□ -1.23
LINC00534-201ENST00000517400 PRPF40AO75400 957 aaKnown RBP7.35□□□□□ -1.23
LINC00534-201ENST00000517400 MAP3K6O95382 1288 aa7.35□□□□□ -1.23
LINC00534-201ENST00000517400 CTBSQ01459 385 aa7.35□□□□□ -1.23
LINC00534-201ENST00000517400 ATP2B2Q01814 1243 aa7.35□□□□□ -1.23
LINC00534-201ENST00000517400 C1orf127Q8N9H9 656 aa7.35□□□□□ -1.23
LINC00534-201ENST00000517400 FBF1Q8TES7 1133 aa7.35□□□□□ -1.23
LINC00534-201ENST00000517400 PNMA5Q96PV4 448 aa7.35□□□□□ -1.23
LINC00534-201ENST00000517400 CNTN3Q9P232 1028 aa7.35□□□□□ -1.23
LINC00534-201ENST00000517400 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.35□□□□□ -1.23
LINC00534-201ENST00000517400 UNCXA6NJT0 531 aa7.34□□□□□ -1.23
LINC00534-201ENST00000517400 MMP20O60882 483 aa7.34□□□□□ -1.23
LINC00534-201ENST00000517400 RARAP10276 462 aa7.34□□□□□ -1.23
LINC00534-201ENST00000517400 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.23
LINC00534-201ENST00000517400 VEGFBP49765 207 aa7.34□□□□□ -1.23
LINC00534-201ENST00000517400 NEUROD1Q13562 356 aa7.34□□□□□ -1.23
LINC00534-201ENST00000517400 KRT25Q7Z3Z0 450 aa7.34□□□□□ -1.23
LINC00534-201ENST00000517400 OR13H1Q8NG92 308 aa7.34□□□□□ -1.23
LINC00534-201ENST00000517400 CHRDQ9H2X0 955 aa7.34□□□□□ -1.23
LINC00534-201ENST00000517400 WWC3Q9ULE0 1092 aa7.34□□□□□ -1.23
LINC00534-201ENST00000517400 VSIG8P0DPA2 414 aa7.33□□□□□ -1.24
LINC00534-201ENST00000517400 NFKB1P19838 968 aa7.33□□□□□ -1.24
LINC00534-201ENST00000517400 BHMTQ93088 406 aa7.33□□□□□ -1.24
LINC00534-201ENST00000517400 TLR7Q9NYK1 1049 aaKnown RBP7.33□□□□□ -1.24
LINC00534-201ENST00000517400 E9PSI1 815 aa7.32□□□□□ -1.24
LINC00534-201ENST00000517400 C2CD2LO14523 706 aa7.32□□□□□ -1.24
LINC00534-201ENST00000517400 HOXD8P13378 290 aaPredicted RBP7.32□□□□□ -1.24
LINC00534-201ENST00000517400 MX2P20592 715 aa7.32□□□□□ -1.24
LINC00534-201ENST00000517400 CES1P23141 567 aa7.32□□□□□ -1.24
LINC00534-201ENST00000517400 SOX18P35713 384 aa7.32□□□□□ -1.24
LINC00534-201ENST00000517400 GPR161Q8N6U8 529 aaKnown RBP7.32□□□□□ -1.24
LINC00534-201ENST00000517400 CCDC74AQ96AQ1 378 aa7.32□□□□□ -1.24
LINC00534-201ENST00000517400 BCL11AQ9H165 835 aa7.32□□□□□ -1.24
LINC00534-201ENST00000517400 AVENQ9NQS1 362 aaPredicted RBP7.32□□□□□ -1.24
LINC00534-201ENST00000517400 PRR12Q9ULL5 1215 aa7.32□□□□□ -1.24
LINC00534-201ENST00000517400 ERBB4Q15303 1308 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 EREGO14944 169 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 PSAPP07602 524 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 BMP4P12644 408 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 GMPRP36959 345 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 GAS6Q14393 721 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 ZNF468Q5VIY5 522 aaPredicted RBP7.31□□□□□ -1.24
LINC00534-201ENST00000517400 USPL1Q5W0Q7 1092 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 RAB44Q7Z6P3 723 aaPredicted RBP7.31□□□□□ -1.24
LINC00534-201ENST00000517400 GALNT12Q8IXK2 581 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 MRRFQ96E11 262 aaKnown RBP7.31□□□□□ -1.24
LINC00534-201ENST00000517400 FRMD6Q96NE9 622 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 SETDB2Q96T68 719 aa7.31□□□□□ -1.24
LINC00534-201ENST00000517400 DUSP9Q99956 384 aaKnown RBP7.31□□□□□ -1.24
LINC00534-201ENST00000517400 SIN3BO75182 1162 aa7.3□□□□□ -1.24
LINC00534-201ENST00000517400 CYP2E1P05181 493 aaPredicted RBP7.3□□□□□ -1.24
LINC00534-201ENST00000517400 VAMP1P23763 118 aa7.3□□□□□ -1.24
LINC00534-201ENST00000517400 DAB2P98082 770 aa7.3□□□□□ -1.24
LINC00534-201ENST00000517400 XPCQ01831 940 aaPredicted RBP7.3□□□□□ -1.24
LINC00534-201ENST00000517400 PLAURQ03405 335 aa7.3□□□□□ -1.24
LINC00534-201ENST00000517400 DHX32Q7L7V1 743 aaKnown RBP7.3□□□□□ -1.24
LINC00534-201ENST00000517400 TMC4Q7Z404 712 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms