RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 SH3TC1Q8TE82 1336 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 SBF1O95248 1867 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 RAD17O75943 681 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CELF2O95319 508 aaKnown RBP9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 NTSR2O95665 410 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ANXA1P04083 346 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 HDGFL1Q5TGJ6 251 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 SP8Q8IXZ3 490 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CCDC146Q8IYE0 955 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ZNF428Q96B54 188 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CAPNS2Q96L46 248 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 PLEKHF1Q96S99 279 aa9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 NSFL1CQ9UNZ2 370 aaKnown RBP9.57□□□□□ -0.88
TNFRSF11B-202ENST00000517352 DLEC1Q9Y238 1755 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 IBTKQ9P2D0 1353 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 RASSF10A6NK89 507 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 TMPOP42166 694 aaKnown RBP9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 GMPSP49915 693 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 WASHC4Q2M389 1173 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CYP4F22Q6NT55 531 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 TMC4Q7Z404 712 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 RIC3Q7Z5B4 369 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 EYA3Q99504 573 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CHMP4AQ9BY43 222 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 WBP1LQ9NX94 342 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 GPRC5DQ9NZD1 345 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 SLX4Q8IY92 1834 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ABCC4O15439 1325 aa9.56□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CCDC85CA6NKD9 419 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 TRAF5O00463 557 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 RIMBP2O15034 1052 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 SCNN1DP51172 638 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CALD1Q05682 793 aaKnown RBP9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CXCL9Q07325 125 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 GOLGA2Q08379 1002 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 DDX10Q13206 875 aaKnown RBP9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 TCIRG1Q13488 830 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 GRAPQ13588 217 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 SLC10A5Q5PT55 438 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 RBM26Q5T8P6 1007 aaKnown RBP9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ANKRD13DQ6ZTN6 518 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CDC37L1Q7L3B6 337 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 NLRP10Q86W26 655 aa9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 GRAPLQ8TC17 118 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 DBF4Q9UBU7 674 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF11B-202ENST00000517352 C3orf67Q6ZVT6 689 aa9.54□□□□□ -0.88
TNFRSF11B-202ENST00000517352 RUNDC1Q96C34 613 aa9.54□□□□□ -0.88
TNFRSF11B-202ENST00000517352 DCPSQ96C86 337 aaKnown RBP9.54□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ZC3H12CQ9C0D7 883 aaKnown RBP9.54□□□□□ -0.88
TNFRSF11B-202ENST00000517352 HYPKQ9NX55 129 aa9.54□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CHPF2Q9P2E5 772 aa9.54□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ANKIB1Q9P2G1 1089 aa9.54□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CNOT7Q9UIV1 285 aaKnown RBP9.54□□□□□ -0.88
TNFRSF11B-202ENST00000517352 COL11A2P13942 1736 aaPredicted RBP9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ANKRD31Q8N7Z5 1873 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ATP5J2-PTCD1G3V325 749 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 CA12O43570 354 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 MAP2K2P36507 400 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 KIAA2012Q0VF49 1180 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 PROSER3Q2NL68 480 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 C2orf69Q8N8R5 385 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 PLBD2Q8NHP8 589 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 ZC3H15Q8WU90 426 aaKnown RBP9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 FAM89AQ96GI7 184 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 GLIS2Q9BZE0 524 aaPredicted RBP9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 FER1L6Q2WGJ9 1857 aa9.53□□□□□ -0.88
TNFRSF11B-202ENST00000517352 DDX58O95786 925 aaKnown RBP9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 HSPA8P11142 646 aaKnown RBP9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 PDIA6Q15084 440 aa9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CCDC88AQ3V6T2 1871 aa9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 USP48Q86UV5 1035 aa9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 MICALL2Q8IY33 904 aa9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 ABHD8Q96I13 439 aa9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 TLL2Q9Y6L7 1015 aa9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 MYBBP1AQ9BQG0 1328 aaKnown RBP9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CDHR2Q9BYE9 1310 aa9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 VIRMAQ69YN4 1812 aaKnown RBP9.52□□□□□ -0.89
TNFRSF11B-202ENST00000517352 RIC1Q4ADV7 1423 aa9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SIPA1L3O60292 1781 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 IRS4O14654 1257 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 AOC2O75106 756 aa9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 HUNKP57058 714 aa9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 FMR1Q06787 632 aaKnown RBP eCLIP9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 TBC1D10BQ4KMP7 808 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 KRT26Q7Z3Y9 468 aa9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SULF1Q8IWU6 871 aa9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 RTFDC1Q9BY42 306 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 DBNDD1Q9H9R9 158 aa9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 TSKSQ9UJT2 592 aa9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 SCN4AP35499 1836 aa9.51□□□□□ -0.89
TNFRSF11B-202ENST00000517352 BCORQ6W2J9 1755 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 ELL2O00472 640 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CHL1O00533 1208 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 HOXB7P09629 217 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 RPS8P62241 208 aaKnown RBP9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 NOGQ13253 232 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 CCDC152Q4G0S7 254 aa9.5□□□□□ -0.89
TNFRSF11B-202ENST00000517352 DUSP27Q5VZP5 1158 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms