RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 TTLL11Q8NHH1 800 aa19.27■□□□□ 0.68
TRPS1-206ENST00000517323 IBTKQ9P2D0 1353 aaPredicted RBP19.26■□□□□ 0.67
TRPS1-206ENST00000517323 GTF2E1P29083 439 aaPredicted RBP19.26■□□□□ 0.67
TRPS1-206ENST00000517323 PTPN12Q05209 780 aaKnown RBP19.26■□□□□ 0.67
TRPS1-206ENST00000517323 TSHZ3Q63HK5 1081 aa19.26■□□□□ 0.67
TRPS1-206ENST00000517323 UPF1Q92900 1129 aaKnown RBP eCLIP19.26■□□□□ 0.67
TRPS1-206ENST00000517323 CTSWP56202 376 aa19.26■□□□□ 0.67
TRPS1-206ENST00000517323 SLC51AQ86UW1 340 aa19.26■□□□□ 0.67
TRPS1-206ENST00000517323 PUS3Q9BZE2 481 aaKnown RBP19.26■□□□□ 0.67
TRPS1-206ENST00000517323 SEC31BQ9NQW1 1179 aa19.26■□□□□ 0.67
TRPS1-206ENST00000517323 STK32BQ9NY57 414 aa19.26■□□□□ 0.67
TRPS1-206ENST00000517323 SPEF2Q9C093 1822 aa19.26■□□□□ 0.67
TRPS1-206ENST00000517323 LAMB2P55268 1798 aa19.26■□□□□ 0.67
TRPS1-206ENST00000517323 TNRC6CQ9HCJ0 1690 aaKnown RBP19.25■□□□□ 0.67
TRPS1-206ENST00000517323 CDHR2Q9BYE9 1310 aa19.25■□□□□ 0.67
TRPS1-206ENST00000517323 NPHP1O15259 732 aa19.25■□□□□ 0.67
TRPS1-206ENST00000517323 OS9Q13438 667 aaPredicted RBP19.25■□□□□ 0.67
TRPS1-206ENST00000517323 CARMIL3Q8ND23 1372 aa19.24■□□□□ 0.67
TRPS1-206ENST00000517323 LRRC24Q50LG9 513 aa19.24■□□□□ 0.67
TRPS1-206ENST00000517323 PDE8AO60658 829 aa19.23■□□□□ 0.67
TRPS1-206ENST00000517323 SASH1O94885 1247 aa19.23■□□□□ 0.67
TRPS1-206ENST00000517323 ITGA6P23229 1130 aa19.23■□□□□ 0.67
TRPS1-206ENST00000517323 CSF1RP07333 972 aa19.22■□□□□ 0.67
TRPS1-206ENST00000517323 TM4SF1P30408 202 aa19.22■□□□□ 0.67
TRPS1-206ENST00000517323 PLA2G12BQ9BX93 195 aa19.22■□□□□ 0.67
TRPS1-206ENST00000517323 RHPN1Q8TCX5 695 aa19.22■□□□□ 0.67
TRPS1-206ENST00000517323 LRRCC1Q9C099 1032 aa19.22■□□□□ 0.67
TRPS1-206ENST00000517323 HDAC5Q9UQL6 1122 aa19.22■□□□□ 0.67
TRPS1-206ENST00000517323 POLRMTO00411 1230 aaKnown RBP19.21■□□□□ 0.67
TRPS1-206ENST00000517323 SERPINB2P05120 415 aa19.21■□□□□ 0.67
TRPS1-206ENST00000517323 PRR5LQ6MZQ0 368 aa19.21■□□□□ 0.67
TRPS1-206ENST00000517323 MMP10P09238 476 aa19.2■□□□□ 0.66
TRPS1-206ENST00000517323 CCDC57Q2TAC2 916 aa19.2■□□□□ 0.66
TRPS1-206ENST00000517323 CNBD1Q8NA66 436 aa19.2■□□□□ 0.66
TRPS1-206ENST00000517323 TPTE2Q6XPS3 522 aa19.2■□□□□ 0.66
TRPS1-206ENST00000517323 NOP58Q9Y2X3 529 aaKnown RBP19.2■□□□□ 0.66
TRPS1-206ENST00000517323 IFIT5Q13325 482 aaKnown RBP19.19■□□□□ 0.66
TRPS1-206ENST00000517323 ATG9AQ7Z3C6 839 aa19.19■□□□□ 0.66
TRPS1-206ENST00000517323 COPRSQ9NQ92 184 aa19.19■□□□□ 0.66
TRPS1-206ENST00000517323 TFCP2Q12800 502 aa19.19■□□□□ 0.66
TRPS1-206ENST00000517323 G3BP1Q13283 466 aaKnown RBP eCLIP19.19■□□□□ 0.66
TRPS1-206ENST00000517323 TLR7Q9NYK1 1049 aaKnown RBP19.19■□□□□ 0.66
TRPS1-206ENST00000517323 PSDA5PKW4 1024 aaPredicted RBP19.17■□□□□ 0.66
TRPS1-206ENST00000517323 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
TRPS1-206ENST00000517323 CCDC125Q86Z20 511 aa19.17■□□□□ 0.66
TRPS1-206ENST00000517323 NYXQ9GZU5 481 aa19.17■□□□□ 0.66
TRPS1-206ENST00000517323 R3HDM1Q15032 1099 aaKnown RBP19.17■□□□□ 0.66
TRPS1-206ENST00000517323 SNAP23O00161 211 aa19.16■□□□□ 0.66
TRPS1-206ENST00000517323 PLEKHM2Q8IWE5 1019 aa19.16■□□□□ 0.66
TRPS1-206ENST00000517323 HELBQ8NG08 1087 aaPredicted RBP19.16■□□□□ 0.66
TRPS1-206ENST00000517323 CCDC8Q9H0W5 538 aaPredicted RBP19.16■□□□□ 0.66
TRPS1-206ENST00000517323 ANKRD31Q8N7Z5 1873 aa19.16■□□□□ 0.66
TRPS1-206ENST00000517323 WTIPA6NIX2 430 aaPredicted RBP19.16■□□□□ 0.66
TRPS1-206ENST00000517323 ZBTB7AO95365 584 aa19.16■□□□□ 0.66
TRPS1-206ENST00000517323 NLGN1Q8N2Q7 840 aa19.16■□□□□ 0.66
TRPS1-206ENST00000517323 FLAD1Q8NFF5 587 aa19.16■□□□□ 0.66
TRPS1-206ENST00000517323 KIF1BPQ96EK5 621 aa19.16■□□□□ 0.66
TRPS1-206ENST00000517323 ZBTB47Q9UFB7 747 aaPredicted RBP19.16■□□□□ 0.66
TRPS1-206ENST00000517323 ANKRD18BA2A2Z9 1011 aa19.15■□□□□ 0.66
TRPS1-206ENST00000517323 RGL2O15211 777 aa19.15■□□□□ 0.66
TRPS1-206ENST00000517323 CELF1Q92879 486 aaKnown RBP19.15■□□□□ 0.66
TRPS1-206ENST00000517323 EAF2Q96CJ1 260 aaPredicted RBP19.15■□□□□ 0.66
TRPS1-206ENST00000517323 QSER1Q2KHR3 1735 aa19.15■□□□□ 0.66
TRPS1-206ENST00000517323 CCDC152Q4G0S7 254 aa19.15■□□□□ 0.66
TRPS1-206ENST00000517323 LDHAL6AQ6ZMR3 332 aa19.15■□□□□ 0.66
TRPS1-206ENST00000517323 EYA2O00167 538 aa19.14■□□□□ 0.65
TRPS1-206ENST00000517323 SLC10A5Q5PT55 438 aa19.14■□□□□ 0.65
TRPS1-206ENST00000517323 AACSQ86V21 672 aa19.14■□□□□ 0.65
TRPS1-206ENST00000517323 NLRP3Q96P20 1036 aa19.14■□□□□ 0.65
TRPS1-206ENST00000517323 RAB11FIP3O75154 756 aa19.13■□□□□ 0.65
TRPS1-206ENST00000517323 CNNM1Q9NRU3 951 aa19.13■□□□□ 0.65
TRPS1-206ENST00000517323 RIC1Q4ADV7 1423 aa19.12■□□□□ 0.65
TRPS1-206ENST00000517323 TAF5LO75529 589 aa19.12■□□□□ 0.65
TRPS1-206ENST00000517323 TIMM10P62072 90 aa19.12■□□□□ 0.65
TRPS1-206ENST00000517323 MAP4K4O95819 1239 aaPredicted RBP19.12■□□□□ 0.65
TRPS1-206ENST00000517323 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
TRPS1-206ENST00000517323 PARP3Q9Y6F1 533 aa19.12■□□□□ 0.65
TRPS1-206ENST00000517323 SALL3Q9BXA9 1300 aa19.11■□□□□ 0.65
TRPS1-206ENST00000517323 GSPT1P15170 499 aaKnown RBP19.11■□□□□ 0.65
TRPS1-206ENST00000517323 SF3B3Q15393 1217 aaKnown RBP19.11■□□□□ 0.65
TRPS1-206ENST00000517323 HSP90AB4PQ58FF6 505 aa19.11■□□□□ 0.65
TRPS1-206ENST00000517323 RIPOR2Q9Y4F9 1068 aa19.11■□□□□ 0.65
TRPS1-206ENST00000517323 ST5P78524 1137 aa19.1■□□□□ 0.65
TRPS1-206ENST00000517323 NRXN2Q9P2S2 1712 aa19.1■□□□□ 0.65
TRPS1-206ENST00000517323 MX1P20591 662 aa19.1■□□□□ 0.65
TRPS1-206ENST00000517323 PDE1AP54750 535 aa19.1■□□□□ 0.65
TRPS1-206ENST00000517323 CLASRPQ8N2M8 674 aaKnown RBP19.1■□□□□ 0.65
TRPS1-206ENST00000517323 NDUFB9Q9Y6M9 179 aa19.1■□□□□ 0.65
TRPS1-206ENST00000517323 CACNA1SQ13698 1873 aa19.09■□□□□ 0.65
TRPS1-206ENST00000517323 HMGB2P26583 209 aaKnown RBP19.09■□□□□ 0.65
TRPS1-206ENST00000517323 TNNI3KQ59H18 835 aa19.09■□□□□ 0.65
TRPS1-206ENST00000517323 MPHOSPH8Q99549 860 aa19.09■□□□□ 0.65
TRPS1-206ENST00000517323 FPGT-TNNI3KV9GXZ4 949 aa19.09■□□□□ 0.65
TRPS1-206ENST00000517323 COL11A2P13942 1736 aaPredicted RBP19.09■□□□□ 0.65
TRPS1-206ENST00000517323 LRP5O75197 1615 aa19.09■□□□□ 0.65
TRPS1-206ENST00000517323 IL15P40933 162 aaPredicted RBP19.09■□□□□ 0.65
TRPS1-206ENST00000517323 METTL24Q5JXM2 366 aa19.09■□□□□ 0.65
TRPS1-206ENST00000517323 ERC1Q8IUD2 1116 aa19.09■□□□□ 0.65
TRPS1-206ENST00000517323 NEUROD6Q96NK8 337 aa19.09■□□□□ 0.65
TRPS1-206ENST00000517323 DBNDD2Q9BQY9 259 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms