RNA–Protein interactions for RNA: ENST00000517315.1

NSMCE2-202, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3 BASIC

Gene NSMCE2, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-202ENST00000517315 ATP1A2P50993 1020 aa8.25□□□□□ -1.09
NSMCE2-202ENST00000517315 TPCN2Q8NHX9 752 aa8.25□□□□□ -1.09
NSMCE2-202ENST00000517315 NUCKS1Q9H1E3 243 aaKnown RBP8.25□□□□□ -1.09
NSMCE2-202ENST00000517315 IQSEC3Q9UPP2 1182 aaPredicted RBP8.25□□□□□ -1.09
NSMCE2-202ENST00000517315 SPATA31E1Q6ZUB1 1445 aa8.25□□□□□ -1.09
NSMCE2-202ENST00000517315 RPGRIP1LQ68CZ1 1315 aa8.25□□□□□ -1.09
NSMCE2-202ENST00000517315 NLRP1Q9C000 1473 aa8.25□□□□□ -1.09
NSMCE2-202ENST00000517315 TMEM131LA2VDJ0 1609 aa8.25□□□□□ -1.09
NSMCE2-202ENST00000517315 NEURL4Q96JN8 1562 aa8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 THBS1P07996 1170 aa8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 MSX1P28360 303 aa8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 GAS6Q14393 721 aa8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 ZNF295-AS1Q8N0V1 137 aa8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 THEMISQ8N1K5 641 aaPredicted RBP8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 GTPBP3Q969Y2 492 aaKnown RBP8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 NIFKQ9BYG3 293 aaKnown RBP8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 PPP1R12CQ9BZL4 782 aa8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 DNAAF2Q9NVR5 837 aaKnown RBP8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 PPLO60437 1756 aa8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 ADGRB3O60242 1522 aa8.24□□□□□ -1.09
NSMCE2-202ENST00000517315 UBR1Q8IWV7 1749 aa8.23□□□□□ -1.09
NSMCE2-202ENST00000517315 MYO3AQ8NEV4 1616 aa8.23□□□□□ -1.09
NSMCE2-202ENST00000517315 CDK2AP1O14519 115 aa8.23□□□□□ -1.09
NSMCE2-202ENST00000517315 CCDC102BQ68D86 513 aa8.23□□□□□ -1.09
NSMCE2-202ENST00000517315 FOXR1Q6PIV2 292 aa8.23□□□□□ -1.09
NSMCE2-202ENST00000517315 RUBCNLQ9H714 662 aa8.23□□□□□ -1.09
NSMCE2-202ENST00000517315 KDM5AP29375 1690 aaKnown RBP8.23□□□□□ -1.09
NSMCE2-202ENST00000517315 IFT172Q9UG01 1749 aa8.23□□□□□ -1.09
NSMCE2-202ENST00000517315 LARGE2Q8N3Y3 721 aa8.22□□□□□ -1.09
NSMCE2-202ENST00000517315 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.22□□□□□ -1.09
NSMCE2-202ENST00000517315 ZNF594Q96JF6 807 aaPredicted RBP8.22□□□□□ -1.09
NSMCE2-202ENST00000517315 SCHIP1Q9P0W5 487 aaPredicted RBP8.22□□□□□ -1.09
NSMCE2-202ENST00000517315 UHRF1BP1Q6BDS2 1440 aa8.21□□□□□ -1.09
NSMCE2-202ENST00000517315 A2ML1A8K2U0 1454 aa8.21□□□□□ -1.09
NSMCE2-202ENST00000517315 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 CSB-PGBD3P0DP91 1061 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 EPHA4P54764 986 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 NBPF8Q3BBV2 869 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 TNS4Q8IZW8 715 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 PGBD3Q8N328 593 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 AIDAQ96BJ3 306 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 TRERF1Q96PN7 1200 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 CABP1Q9NZU7 370 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 GTF3C3Q9Y5Q9 886 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 EID1Q9Y6B2 187 aa8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 CEP170BQ9Y4F5 1589 aaPredicted RBP8.21□□□□□ -1.1
NSMCE2-202ENST00000517315 RIMS2Q9UQ26 1411 aa8.2□□□□□ -1.1
NSMCE2-202ENST00000517315 NEXMIFQ5QGS0 1516 aa8.2□□□□□ -1.1
NSMCE2-202ENST00000517315 ATP4AP20648 1035 aa8.2□□□□□ -1.1
NSMCE2-202ENST00000517315 RASA1P20936 1047 aa8.2□□□□□ -1.1
NSMCE2-202ENST00000517315 FOXK2Q01167 660 aa8.2□□□□□ -1.1
NSMCE2-202ENST00000517315 TXNDC2Q86VQ3 553 aa8.2□□□□□ -1.1
NSMCE2-202ENST00000517315 SIX5Q8N196 739 aa8.2□□□□□ -1.1
NSMCE2-202ENST00000517315 ADGRF5Q8IZF2 1346 aa8.2□□□□□ -1.1
NSMCE2-202ENST00000517315 ZNF142P52746 1687 aaPredicted RBP8.2□□□□□ -1.1
NSMCE2-202ENST00000517315 DKK1O94907 266 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 ADAMTS2O95450 1211 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 SLURP2P0DP57 97 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 LMOD1P29536 600 aaPredicted RBP8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 SRSF11Q05519 484 aaKnown RBP8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 UBAP2LQ14157 1087 aaKnown RBP8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 LBRQ14739 615 aaKnown RBP8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 EFHC2Q5JST6 749 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 TBCELQ5QJ74 424 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 SLC9A9Q8IVB4 645 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 CRISPLD1Q9H336 500 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 MBIPQ9NS73 344 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 PARP3Q9Y6F1 533 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 TMEM2Q9UHN6 1383 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 PRAG1Q86YV5 1406 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 MYOM2P54296 1465 aa8.19□□□□□ -1.1
NSMCE2-202ENST00000517315 SFI1A8K8P3 1242 aa8.18□□□□□ -1.1
NSMCE2-202ENST00000517315 NBPF1Q3BBV0 1214 aa8.18□□□□□ -1.1
NSMCE2-202ENST00000517315 ANKLE2Q86XL3 938 aa8.18□□□□□ -1.1
NSMCE2-202ENST00000517315 C1orf216Q8TAB5 229 aa8.18□□□□□ -1.1
NSMCE2-202ENST00000517315 WHAMMQ8TF30 809 aa8.18□□□□□ -1.1
NSMCE2-202ENST00000517315 ZDHHC1Q8WTX9 485 aa8.18□□□□□ -1.1
NSMCE2-202ENST00000517315 ZMYND15Q9H091 742 aa8.18□□□□□ -1.1
NSMCE2-202ENST00000517315 TRPM1Q7Z4N2 1603 aa8.18□□□□□ -1.1
NSMCE2-202ENST00000517315 M0R2N6 131 aa8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 CRTC2Q53ET0 693 aaPredicted RBP8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 CFAP70Q5T0N1 1121 aa8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 ZNF385CQ66K41 422 aaPredicted RBP8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 CARD11Q9BXL7 1154 aa8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 ZDHHC3Q9NYG2 299 aa8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 RBM19Q9Y4C8 960 aaKnown RBP8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 ROCK2O75116 1388 aaKnown RBP8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 ZFYVE9O95405 1425 aa8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 KIAA1210Q9ULL0 1709 aa8.17□□□□□ -1.1
NSMCE2-202ENST00000517315 MX2P20592 715 aa8.16□□□□□ -1.1
NSMCE2-202ENST00000517315 LTKP29376 864 aa8.16□□□□□ -1.1
NSMCE2-202ENST00000517315 TEAD4Q15561 434 aa8.16□□□□□ -1.1
NSMCE2-202ENST00000517315 LARP1Q6PKG0 1096 aaKnown RBP8.16□□□□□ -1.1
NSMCE2-202ENST00000517315 SVOPQ8N4V2 548 aa8.16□□□□□ -1.1
NSMCE2-202ENST00000517315 TSEN2Q8NCE0 465 aaKnown RBP8.16□□□□□ -1.1
NSMCE2-202ENST00000517315 CFHR5Q9BXR6 569 aa8.16□□□□□ -1.1
NSMCE2-202ENST00000517315 TSPAN10Q9H1Z9 355 aaPredicted RBP8.16□□□□□ -1.1
NSMCE2-202ENST00000517315 C14orf93Q9H972 538 aaKnown RBP8.16□□□□□ -1.1
NSMCE2-202ENST00000517315 SLIT1O75093 1534 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms