RNA–Protein interactions for RNA: ENST00000517310.5

EFCAB13-202, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,477 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-202ENST00000517310 CHMP3Q9Y3E7 222 aa27.21■■□□□ 1.95
EFCAB13-202ENST00000517310 PARP3Q9Y6F1 533 aa27.21■■□□□ 1.95
EFCAB13-202ENST00000517310 R3HDM1Q15032 1099 aaKnown RBP27.2■■□□□ 1.95
EFCAB13-202ENST00000517310 ST5P78524 1137 aa27.19■■□□□ 1.94
EFCAB13-202ENST00000517310 SF3B3Q15393 1217 aaKnown RBP27.19■■□□□ 1.94
EFCAB13-202ENST00000517310 FAM161AQ3B820 660 aa27.19■■□□□ 1.94
EFCAB13-202ENST00000517310 NOP58Q9Y2X3 529 aaKnown RBP27.19■■□□□ 1.94
EFCAB13-202ENST00000517310 TNRC6CQ9HCJ0 1690 aaKnown RBP27.18■■□□□ 1.94
EFCAB13-202ENST00000517310 RTL9Q8NET4 1388 aa27.18■■□□□ 1.94
EFCAB13-202ENST00000517310 CCDC152Q4G0S7 254 aa27.18■■□□□ 1.94
EFCAB13-202ENST00000517310 CCDC24Q8N4L8 307 aa27.18■■□□□ 1.94
EFCAB13-202ENST00000517310 NLRP3Q96P20 1036 aa27.18■■□□□ 1.94
EFCAB13-202ENST00000517310 COPRSQ9NQ92 184 aa27.18■■□□□ 1.94
EFCAB13-202ENST00000517310 PTPN12Q05209 780 aaKnown RBP27.17■■□□□ 1.94
EFCAB13-202ENST00000517310 CCDC57Q2TAC2 916 aa27.17■■□□□ 1.94
EFCAB13-202ENST00000517310 C3orf67Q6ZVT6 689 aa27.17■■□□□ 1.94
EFCAB13-202ENST00000517310 CCDC85AQ96PX6 553 aaPredicted RBP27.17■■□□□ 1.94
EFCAB13-202ENST00000517310 GREM2Q9H772 168 aa27.17■■□□□ 1.94
EFCAB13-202ENST00000517310 SURF6O75683 361 aaKnown RBP27.16■■□□□ 1.94
EFCAB13-202ENST00000517310 IFIT5Q13325 482 aaKnown RBP27.16■■□□□ 1.94
EFCAB13-202ENST00000517310 PA2G4Q9UQ80 394 aaKnown RBP27.16■■□□□ 1.94
EFCAB13-202ENST00000517310 EXOC6BQ9Y2D4 811 aa27.16■■□□□ 1.94
EFCAB13-202ENST00000517310 ANKRD18BA2A2Z9 1011 aa27.14■■□□□ 1.94
EFCAB13-202ENST00000517310 ITGA6P23229 1130 aa27.14■■□□□ 1.94
EFCAB13-202ENST00000517310 HSP90AB4PQ58FF6 505 aa27.14■■□□□ 1.94
EFCAB13-202ENST00000517310 KLHDC4Q8TBB5 520 aa27.14■■□□□ 1.94
EFCAB13-202ENST00000517310 MTFR1LQ9H019 292 aa27.13■■□□□ 1.93
EFCAB13-202ENST00000517310 ANKRD31Q8N7Z5 1873 aa27.13■■□□□ 1.93
EFCAB13-202ENST00000517310 RAB11FIP3O75154 756 aa27.13■■□□□ 1.93
EFCAB13-202ENST00000517310 BRIP1Q9BX63 1249 aa27.12■■□□□ 1.93
EFCAB13-202ENST00000517310 KLRG2A4D1S0 409 aaPredicted RBP27.11■■□□□ 1.93
EFCAB13-202ENST00000517310 PSDA5PKW4 1024 aaPredicted RBP27.11■■□□□ 1.93
EFCAB13-202ENST00000517310 ZBTB7AO95365 584 aa27.11■■□□□ 1.93
EFCAB13-202ENST00000517310 NUCB1Q02818 461 aa27.11■■□□□ 1.93
EFCAB13-202ENST00000517310 FBXO3Q9UK99 471 aa27.11■■□□□ 1.93
EFCAB13-202ENST00000517310 PDZRN3Q9UPQ7 1066 aa27.11■■□□□ 1.93
EFCAB13-202ENST00000517310 G3BP1Q13283 466 aaKnown RBP eCLIP27.1■■□□□ 1.93
EFCAB13-202ENST00000517310 ZNF594Q96JF6 807 aaPredicted RBP27.1■■□□□ 1.93
EFCAB13-202ENST00000517310 CRY2Q49AN0 593 aa27.09■■□□□ 1.93
EFCAB13-202ENST00000517310 TAF7LQ5H9L4 462 aa27.09■■□□□ 1.93
EFCAB13-202ENST00000517310 ANKRD45Q5TZF3 282 aa27.09■■□□□ 1.93
EFCAB13-202ENST00000517310 SIL1Q9H173 461 aa27.09■■□□□ 1.93
EFCAB13-202ENST00000517310 SEC31BQ9NQW1 1179 aa27.09■■□□□ 1.93
EFCAB13-202ENST00000517310 LRP5O75197 1615 aa27.09■■□□□ 1.93
EFCAB13-202ENST00000517310 CIAO1O76071 339 aa27.08■■□□□ 1.93
EFCAB13-202ENST00000517310 ERC1Q8IUD2 1116 aa27.08■■□□□ 1.93
EFCAB13-202ENST00000517310 EYA2O00167 538 aa27.07■■□□□ 1.92
EFCAB13-202ENST00000517310 OS9Q13438 667 aaPredicted RBP27.07■■□□□ 1.92
EFCAB13-202ENST00000517310 CDC5LQ99459 802 aaKnown RBP27.07■■□□□ 1.92
EFCAB13-202ENST00000517310 APBB1O00213 710 aa27.06■■□□□ 1.92
EFCAB13-202ENST00000517310 CHD1LQ86WJ1 897 aa27.06■■□□□ 1.92
EFCAB13-202ENST00000517310 KIF1BPQ96EK5 621 aa27.06■■□□□ 1.92
EFCAB13-202ENST00000517310 LRRCC1Q9C099 1032 aa27.06■■□□□ 1.92
EFCAB13-202ENST00000517310 PDE6BP35913 854 aa27.06■■□□□ 1.92
EFCAB13-202ENST00000517310 ATG9AQ7Z3C6 839 aa27.06■■□□□ 1.92
EFCAB13-202ENST00000517310 RHPN1Q8TCX5 695 aa27.06■■□□□ 1.92
EFCAB13-202ENST00000517310 ATF5Q9Y2D1 282 aaPredicted RBP27.06■■□□□ 1.92
EFCAB13-202ENST00000517310 TAF1P21675 1872 aa27.05■■□□□ 1.92
EFCAB13-202ENST00000517310 SASH1O94885 1247 aa27.05■■□□□ 1.92
EFCAB13-202ENST00000517310 IL15P40933 162 aaPredicted RBP27.05■■□□□ 1.92
EFCAB13-202ENST00000517310 DDX46Q7L014 1031 aaKnown RBP27.05■■□□□ 1.92
EFCAB13-202ENST00000517310 PUS3Q9BZE2 481 aaKnown RBP27.05■■□□□ 1.92
EFCAB13-202ENST00000517310 COL4A1P02462 1669 aa27.04■■□□□ 1.92
EFCAB13-202ENST00000517310 POLD1P28340 1107 aa27.04■■□□□ 1.92
EFCAB13-202ENST00000517310 IGHMBP2P38935 993 aaKnown RBP27.04■■□□□ 1.92
EFCAB13-202ENST00000517310 LRRC24Q50LG9 513 aa27.04■■□□□ 1.92
EFCAB13-202ENST00000517310 C10orf71Q711Q0 1435 aa27.04■■□□□ 1.92
EFCAB13-202ENST00000517310 ZBTB47Q9UFB7 747 aaPredicted RBP27.04■■□□□ 1.92
EFCAB13-202ENST00000517310 SPEF2Q9C093 1822 aa27.03■■□□□ 1.92
EFCAB13-202ENST00000517310 LDHAL6AQ6ZMR3 332 aa27.03■■□□□ 1.92
EFCAB13-202ENST00000517310 RPGRQ92834 1020 aaKnown RBP27.03■■□□□ 1.92
EFCAB13-202ENST00000517310 LNPKQ9C0E8 428 aa27.03■■□□□ 1.92
EFCAB13-202ENST00000517310 SMARCA5O60264 1052 aaPredicted RBP27.02■■□□□ 1.92
EFCAB13-202ENST00000517310 HOXA10P31260 410 aaPredicted RBP27.02■■□□□ 1.92
EFCAB13-202ENST00000517310 ANKRD18AQ8IVF6 992 aa27.02■■□□□ 1.92
EFCAB13-202ENST00000517310 MPHOSPH8Q99549 860 aa27.02■■□□□ 1.92
EFCAB13-202ENST00000517310 RIPOR2Q9Y4F9 1068 aa27.02■■□□□ 1.92
EFCAB13-202ENST00000517310 COL11A2P13942 1736 aaPredicted RBP27.01■■□□□ 1.91
EFCAB13-202ENST00000517310 CELF1Q92879 486 aaKnown RBP27.01■■□□□ 1.91
EFCAB13-202ENST00000517310 RBM17Q96I25 401 aaKnown RBP27.01■■□□□ 1.91
EFCAB13-202ENST00000517310 SGIP1Q9BQI5 828 aa27.01■■□□□ 1.91
EFCAB13-202ENST00000517310 KIF13BQ9NQT8 1826 aa27.01■■□□□ 1.91
EFCAB13-202ENST00000517310 GRAPQ13588 217 aa27■■□□□ 1.91
EFCAB13-202ENST00000517310 GRAPLQ8TC17 118 aaPredicted RBP27■■□□□ 1.91
EFCAB13-202ENST00000517310 CNNM1Q9NRU3 951 aa27■■□□□ 1.91
EFCAB13-202ENST00000517310 SRGNP10124 158 aa27■■□□□ 1.91
EFCAB13-202ENST00000517310 RPS8P62241 208 aaKnown RBP27■■□□□ 1.91
EFCAB13-202ENST00000517310 NPR1P16066 1061 aa26.99■■□□□ 1.91
EFCAB13-202ENST00000517310 PDE4AP27815 886 aa26.99■■□□□ 1.91
EFCAB13-202ENST00000517310 CRAMP1Q96RY5 1269 aa26.99■■□□□ 1.91
EFCAB13-202ENST00000517310 IL1RAPL2Q9NP60 686 aa26.99■■□□□ 1.91
EFCAB13-202ENST00000517310 BSDC1Q9NW68 430 aaPredicted RBP26.99■■□□□ 1.91
EFCAB13-202ENST00000517310 TFCP2Q12800 502 aa26.98■■□□□ 1.91
EFCAB13-202ENST00000517310 SKAP1Q86WV1 359 aa26.98■■□□□ 1.91
EFCAB13-202ENST00000517310 PTGER2P43116 358 aa26.97■■□□□ 1.91
EFCAB13-202ENST00000517310 CLASRPQ8N2M8 674 aaKnown RBP26.97■■□□□ 1.91
EFCAB13-202ENST00000517310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.97■■□□□ 1.91
EFCAB13-202ENST00000517310 MROH5Q6ZUA9 1318 aa26.97■■□□□ 1.91
EFCAB13-202ENST00000517310 C2CD5Q86YS7 1000 aa26.96■■□□□ 1.91
EFCAB13-202ENST00000517310 MASTLQ96GX5 879 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms