RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 PLEKHD1A6NEE1 506 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 C11orf95C9JLR9 678 aaPredicted RBP3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 DNAJC6O75061 913 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 IL2RAP01589 272 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 RPLP1P05386 114 aaKnown RBP3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 IRS1P35568 1242 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 ADD1P35611 737 aaKnown RBP3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 ETFBP38117 255 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 NASPP49321 788 aaPredicted RBP3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 ARID5BQ14865 1188 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 PWP2Q15269 919 aaKnown RBP3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 TLR1Q15399 786 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 PLEKHG4Q58EX7 1191 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 ANKS3Q6ZW76 656 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 KIAA0825Q8IV33 1275 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 RPUSD2Q8IZ73 545 aaKnown RBP3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 L3MBTL2Q969R5 705 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 SPON2Q9BUD6 331 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 PHACTR1Q9C0D0 580 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 ARHGEF10LQ9HCE6 1279 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 KBTBD4Q9NVX7 518 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 CABP1Q9NZU7 370 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 CHPF2Q9P2E5 772 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 FOXD3Q9UJU5 478 aaPredicted RBP3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 ZNF232Q9UNY5 417 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 RIPOR2Q9Y4F9 1068 aa3.57□□□□□ -1.84
SCARNA3-201ENST00000517097 FAM221BA6H8Z2 402 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 PPP1R12AO14974 1030 aaPredicted RBP3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 U2SURPO15042 1029 aaKnown RBP3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 TPD52L2O43399 206 aaKnown RBP3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 KLF4O43474 513 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 TNFRSF21O75509 655 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 SNRPBP14678 240 aaKnown RBP3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 FSHRP23945 695 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 RASA3Q14644 834 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 PLEKHG6Q3KR16 790 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 RC3H1Q5TC82 1133 aaKnown RBP3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 NXPE4Q6UWF7 544 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 NBPF15Q8N660 670 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 HPS1Q92902 700 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 CNKSR1Q969H4 720 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 CDK15Q96Q40 435 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 ESYT1Q9BSJ8 1104 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 RSRP1Q9BUV0 290 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 TRIM55Q9BYV6 548 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 BCO2Q9BYV7 579 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 SRCIN1Q9C0H9 1055 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 ATP13A2Q9NQ11 1180 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 SNTG2Q9NY99 539 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 FAM13BQ9NYF5 915 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 ADAMTS1Q9UHI8 967 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 EFR3BQ9Y2G0 817 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 PRKAB1Q9Y478 270 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 HRH3Q9Y5N1 445 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 PARP3Q9Y6F1 533 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 MRVI1Q9Y6F6 885 aa3.56□□□□□ -1.84
SCARNA3-201ENST00000517097 MICAL2O94851 1124 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 MAP4K4O95819 1239 aaPredicted RBP3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 GRM5P41594 1212 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 CHMP4BP1P59074 171 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 RAB33AQ14088 237 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 HSP90AB2PQ58FF8 381 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 LCE2CQ5TA81 110 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 RELL1Q8IUW5 271 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 FAM9AQ8IZU1 332 aaPredicted RBP3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 ZNF295-AS1Q8N0V1 137 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 SH3TC2Q8TF17 1288 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 STAG1Q8WVM7 1258 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 HNRNPLLQ8WVV9 542 aaKnown RBP3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 EAF1Q96JC9 268 aaPredicted RBP3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 DEPDC7Q96QD5 511 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 PSMD1Q99460 953 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 NOC4LQ9BVI4 516 aaKnown RBP3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 IRF2BPLQ9H1B7 796 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 MYH16Q9H6N6 1097 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 KANSL2Q9H9L4 492 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 ZFYVE28Q9HCC9 887 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 NPHS2Q9NP85 383 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 GINM1Q9NU53 330 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 DDX56Q9NY93 547 aaKnown RBP3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 STRIP2Q9ULQ0 834 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 TTF2Q9UNY4 1162 aaKnown RBP3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 BCS1LQ9Y276 419 aa3.55□□□□□ -1.84
SCARNA3-201ENST00000517097 MINDY4BA8MYZ0 360 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 SIAH2O43255 324 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 CDC45O75419 566 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 WFS1O76024 890 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 EIF4A3P38919 411 aaKnown RBP3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 AMPD3Q01432 767 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 CENPCQ03188 943 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 PWP1Q13610 501 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 PPP1R26Q5T8A7 1209 aaPredicted RBP3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 C1orf53Q5VUE5 145 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 XKR5Q6UX68 686 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 LRP10Q7Z4F1 713 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 CCDC116Q8IYX3 515 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 SNX29Q8TEQ0 813 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 TRIM47Q96LD4 638 aa3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 FHDC1Q9C0D6 1143 aaPredicted RBP3.54□□□□□ -1.84
SCARNA3-201ENST00000517097 SLKQ9H2G2 1235 aaPredicted RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms