RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 NLRP3Q96P20 1036 aa10.9□□□□□ -0.66
SCARNA20.3-201ENST00000516913 POLLQ9UGP5 575 aa10.9□□□□□ -0.66
SCARNA20.3-201ENST00000516913 TSKSQ9UJT2 592 aa10.9□□□□□ -0.66
SCARNA20.3-201ENST00000516913 ZBTB12Q9Y330 459 aaPredicted RBP10.9□□□□□ -0.66
SCARNA20.3-201ENST00000516913 EIF6P56537 245 aaKnown RBP10.89□□□□□ -0.67
SCARNA20.3-201ENST00000516913 KIAA2012Q0VF49 1180 aa10.89□□□□□ -0.67
SCARNA20.3-201ENST00000516913 RTL5Q5HYW3 569 aaPredicted RBP10.89□□□□□ -0.67
SCARNA20.3-201ENST00000516913 PRDM10Q9NQV6 1147 aa10.89□□□□□ -0.67
SCARNA20.3-201ENST00000516913 BABAM1Q9NWV8 329 aa10.89□□□□□ -0.67
SCARNA20.3-201ENST00000516913 TRMT112Q9UI30 125 aaKnown RBP10.89□□□□□ -0.67
SCARNA20.3-201ENST00000516913 ZNRF3Q9ULT6 936 aa10.89□□□□□ -0.67
SCARNA20.3-201ENST00000516913 RTL9Q8NET4 1388 aa10.89□□□□□ -0.67
SCARNA20.3-201ENST00000516913 ASTN2O75129 1339 aaPredicted RBP10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 MAPK8IP3Q9UPT6 1336 aa10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 LAMB2P55268 1798 aa10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 BBOX1O75936 387 aa10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 GPSM2P81274 684 aa10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 RALBP1Q15311 655 aa10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 PPP1R42Q7Z4L9 355 aa10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 CAPNS2Q96L46 248 aa10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 PHAXQ9H814 394 aaKnown RBP10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 SEC31BQ9NQW1 1179 aa10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 MBIPQ9NS73 344 aa10.88□□□□□ -0.67
SCARNA20.3-201ENST00000516913 CTCFP49711 727 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 GRAPQ13588 217 aa10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 SF3B3Q15393 1217 aaKnown RBP10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 USP50Q70EL3 339 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 NIM1KQ8IY84 436 aa10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 MPNDQ8N594 471 aa10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 C8orf58Q8NAV2 365 aa10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 GRAPLQ8TC17 118 aaPredicted RBP10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 LAS1LQ9Y4W2 734 aaKnown RBP10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 TLL2Q9Y6L7 1015 aa10.87□□□□□ -0.67
SCARNA20.3-201ENST00000516913 SH3TC1Q8TE82 1336 aa10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 PSMD14O00487 310 aa10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 DUSP27Q5VZP5 1158 aa10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 DPP8Q6V1X1 898 aaPredicted RBP10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 ANKRD13DQ6ZTN6 518 aa10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 SAPCD2Q86UD0 394 aa10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 TSPYL6Q8N831 410 aa10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 RUNDC1Q96C34 613 aa10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 DBNDD1Q9H9R9 158 aa10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 ADARB2Q9NS39 739 aaKnown RBP10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 ABT1Q9ULW3 272 aaKnown RBP10.86□□□□□ -0.67
SCARNA20.3-201ENST00000516913 ELL2O00472 640 aaPredicted RBP10.85□□□□□ -0.67
SCARNA20.3-201ENST00000516913 RIMBP2O15034 1052 aa10.85□□□□□ -0.67
SCARNA20.3-201ENST00000516913 DOK7Q18PE1 504 aa10.85□□□□□ -0.67
SCARNA20.3-201ENST00000516913 HDGFL1Q5TGJ6 251 aa10.85□□□□□ -0.67
SCARNA20.3-201ENST00000516913 CIAPIN1Q6FI81 312 aa10.85□□□□□ -0.67
SCARNA20.3-201ENST00000516913 USP48Q86UV5 1035 aa10.85□□□□□ -0.67
SCARNA20.3-201ENST00000516913 PLBD2Q8NHP8 589 aa10.85□□□□□ -0.67
SCARNA20.3-201ENST00000516913 CNOT7Q9UIV1 285 aaKnown RBP10.85□□□□□ -0.67
SCARNA20.3-201ENST00000516913 MYBBP1AQ9BQG0 1328 aaKnown RBP10.84□□□□□ -0.67
SCARNA20.3-201ENST00000516913 DDX60Q8IY21 1712 aaKnown RBP10.84□□□□□ -0.67
SCARNA20.3-201ENST00000516913 APAF1O14727 1248 aa10.84□□□□□ -0.67
SCARNA20.3-201ENST00000516913 CELF2O95319 508 aaKnown RBP10.84□□□□□ -0.67
SCARNA20.3-201ENST00000516913 GRM1Q13255 1194 aa10.84□□□□□ -0.67
SCARNA20.3-201ENST00000516913 TRIM28Q13263 835 aaKnown RBP10.84□□□□□ -0.67
SCARNA20.3-201ENST00000516913 ABHD8Q96I13 439 aa10.84□□□□□ -0.67
SCARNA20.3-201ENST00000516913 CFAP44Q96MT7 982 aa10.84□□□□□ -0.67
SCARNA20.3-201ENST00000516913 THSD7BQ9C0I4 1608 aa10.84□□□□□ -0.67
SCARNA20.3-201ENST00000516913 HTTP42858 3142 aa10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 NEFMP07197 916 aa10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 LMOD1P29536 600 aaPredicted RBP10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 TBC1D10BQ4KMP7 808 aaPredicted RBP10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 GRIPAP1Q4V328 841 aa10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 DDX46Q7L014 1031 aaKnown RBP10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 TBC1D16Q8TBP0 767 aa10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 VPS33BQ9H267 617 aa10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 PRKRIP1Q9H875 184 aaPredicted RBP10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 NSFL1CQ9UNZ2 370 aaKnown RBP10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 SCAF8Q9UPN6 1271 aaKnown RBP10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 SCN9AQ15858 1988 aa10.83□□□□□ -0.68
SCARNA20.3-201ENST00000516913 LRRC37AA6NMS7 1700 aa10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 FAM155AB1AL88 458 aaPredicted RBP10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 ADM5C9JUS6 153 aa10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 IRS4O14654 1257 aaPredicted RBP10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 IGKV5-2P06315 115 aa10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 HSP90AB3PQ58FF7 597 aa10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 G2E3Q7L622 706 aa10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 CCDC85AQ96PX6 553 aaPredicted RBP10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 PNNQ9H307 717 aaKnown RBP10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 ANKRD36CQ5JPF3 1778 aa10.82□□□□□ -0.68
SCARNA20.3-201ENST00000516913 RPS8P62241 208 aaKnown RBP10.81□□□□□ -0.68
SCARNA20.3-201ENST00000516913 GMLQ99445 158 aa10.81□□□□□ -0.68
SCARNA20.3-201ENST00000516913 MXD3Q9BW11 206 aa10.81□□□□□ -0.68
SCARNA20.3-201ENST00000516913 DBF4Q9UBU7 674 aaPredicted RBP10.81□□□□□ -0.68
SCARNA20.3-201ENST00000516913 ECE2O60344 883 aa10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 VIL1P09327 827 aaKnown RBP10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 HOXB7P09629 217 aa10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 WASHC4Q2M389 1173 aa10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 TXNRD3Q86VQ6 643 aa10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 DPF2Q92785 391 aa10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 MYD88Q99836 296 aa10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 ZNF408Q9H9D4 720 aa10.8□□□□□ -0.68
SCARNA20.3-201ENST00000516913 MKI67P46013 3256 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms