RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 OSBPL1AQ9BXW6 950 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 BRD7Q9NPI1 651 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 ATG3Q9NT62 314 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 CABP1Q9NZU7 370 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 SERTAD1Q9UHV2 236 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 KCNH4Q9UQ05 1017 aa2.16□□□□□ -2.06
RNU6-557P-201ENST00000516842 ZNF503-AS2A6NEH8 195 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 ZBTB42B2RXF5 422 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 MYCP01106 439 aaPredicted RBP2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 SYN1P17600 705 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 TGM1P22735 817 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 SCNN1DP51172 638 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 SMTNP53814 917 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 TUSC1Q2TAM9 212 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 ACAD11Q709F0 780 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 ATG4DQ86TL0 474 aaPredicted RBP2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 RC3H2Q9HBD1 1191 aaKnown RBP2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 POLR3EQ9NVU0 708 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 KCNK4Q9NYG8 393 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 ADAMTS6Q9UKP5 1117 aa2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 IQSEC3Q9UPP2 1182 aaPredicted RBP2.15□□□□□ -2.07
RNU6-557P-201ENST00000516842 SFI1A8K8P3 1242 aa2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 CYP26A1O43174 497 aa2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 RNASE1P07998 156 aaKnown RBP2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 HOXD8P13378 290 aaPredicted RBP2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 ELMSAN1Q6PJG2 1045 aa2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 HFE2Q6ZVN8 426 aa2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 CCDC125Q86Z20 511 aa2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 GALNT11Q8NCW6 608 aa2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 ZDHHC1Q8WTX9 485 aa2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 LIN37Q96GY3 246 aaPredicted RBP2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 SMG9Q9H0W8 520 aaKnown RBP2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 NEUROD4Q9HD90 331 aa2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 PARD6AQ9NPB6 346 aa2.14□□□□□ -2.07
RNU6-557P-201ENST00000516842 ZBBXA8MT70 800 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 INHAP05111 366 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 NFKB1P19838 968 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 GDF10P55107 478 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 BNIP3Q12983 259 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 PUM1Q14671 1186 aaKnown RBP eCLIP2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 AMHR2Q16671 573 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 ZXDCQ2QGD7 858 aaPredicted RBP2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 SH3PXD2AQ5TCZ1 1133 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 GDF6Q6KF10 455 aaPredicted RBP2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 KIAA1211Q6ZU35 1233 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 PARP9Q8IXQ6 854 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 IL22RA1Q8N6P7 574 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 ZNF280CQ8ND82 737 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 BCL7CQ8WUZ0 217 aaPredicted RBP2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 CEP41Q9BYV8 373 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 KCNK12Q9HB15 430 aa2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 MBNL3Q9NUK0 354 aaKnown RBP2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 ZC3H7BQ9UGR2 993 aaKnown RBP2.13□□□□□ -2.07
RNU6-557P-201ENST00000516842 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 INSRRP14616 1297 aa2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 ADMP35318 185 aa2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 PREPP48147 710 aa2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 CLK2P49760 499 aaKnown RBP2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 KCNQ4P56696 695 aa2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 TYRO3Q06418 890 aa2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 UVSSAQ2YD98 709 aa2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 PRR23BQ6ZRT6 265 aa2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 LRRN4CLQ8ND94 238 aa2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 FRRS1LQ9P0K9 344 aa2.12□□□□□ -2.07
RNU6-557P-201ENST00000516842 A6NJY4 79 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 EML1O00423 815 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 DDX3YO15523 660 aaKnown RBP2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 AP1G2O75843 785 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 ADRB1P08588 477 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 BMP7P18075 431 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 CD96P40200 585 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 SGO2Q562F6 1265 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 FAM117BQ6P1L5 589 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 TXNDC11Q6PKC3 985 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 L3MBTL2Q969R5 705 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 PPP1R16BQ96T49 567 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 GSX2Q9BZM3 304 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 ZCCHC4Q9H5U6 513 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 LRRC4CQ9HCJ2 640 aa2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.11□□□□□ -2.07
RNU6-557P-201ENST00000516842 FAM170BA6NMN3 283 aa2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 CDK2AP1O14519 115 aa2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 MAP4P27816 1152 aaKnown RBP2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 NFIXQ14938 502 aa2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 KCNA10Q16322 511 aa2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 TBCELQ5QJ74 424 aa2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 PNMA1Q8ND90 353 aa2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 TRIM34Q9BYJ4 488 aa2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 CRIM1Q9NZV1 1036 aa2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 SLC5A6Q9Y289 635 aa2.1□□□□□ -2.07
RNU6-557P-201ENST00000516842 LINC01387J3KSC0 135 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 NFIBO00712 420 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 SART1O43290 800 aaKnown RBP2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 CDC25BP30305 580 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 CIAPIN1Q6FI81 312 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 KRT25Q7Z3Z0 450 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 GIMAP7Q8NHV1 300 aa2.09□□□□□ -2.07
RNU6-557P-201ENST00000516842 RHPN1Q8TCX5 695 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms