RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 RAB6BQ9NRW1 208 aa10.79□□□□□ -0.68
LINC00461-216ENST00000515885 CFDP1Q9UEE9 299 aaPredicted RBP10.79□□□□□ -0.68
LINC00461-216ENST00000515885 PLEKHH2Q8IVE3 1493 aa10.79□□□□□ -0.68
LINC00461-216ENST00000515885 BRD2P25440 801 aaKnown RBP10.78□□□□□ -0.68
LINC00461-216ENST00000515885 ADD1P35611 737 aaKnown RBP10.78□□□□□ -0.68
LINC00461-216ENST00000515885 ZNF76P36508 570 aa10.78□□□□□ -0.68
LINC00461-216ENST00000515885 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
LINC00461-216ENST00000515885 SH3PXD2AQ5TCZ1 1133 aa10.78□□□□□ -0.68
LINC00461-216ENST00000515885 SLC43A3Q8NBI5 491 aa10.78□□□□□ -0.68
LINC00461-216ENST00000515885 ACBD3Q9H3P7 528 aa10.78□□□□□ -0.68
LINC00461-216ENST00000515885 IQSEC3Q9UPP2 1182 aaPredicted RBP10.78□□□□□ -0.68
LINC00461-216ENST00000515885 EMILIN1Q9Y6C2 1016 aa10.78□□□□□ -0.68
LINC00461-216ENST00000515885 WASHC2CQ9Y4E1 1318 aa10.78□□□□□ -0.68
LINC00461-216ENST00000515885 MED14O60244 1454 aa10.77□□□□□ -0.69
LINC00461-216ENST00000515885 KIF3BO15066 747 aa10.77□□□□□ -0.69
LINC00461-216ENST00000515885 IL2RAP01589 272 aa10.77□□□□□ -0.69
LINC00461-216ENST00000515885 ITGAEP38570 1179 aa10.77□□□□□ -0.69
LINC00461-216ENST00000515885 GIMAP6Q6P9H5 292 aa10.77□□□□□ -0.69
LINC00461-216ENST00000515885 CCSER2Q9H7U1 834 aa10.77□□□□□ -0.69
LINC00461-216ENST00000515885 CAPN10Q9HC96 672 aa10.77□□□□□ -0.69
LINC00461-216ENST00000515885 PZPP20742 1482 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 GPATCH8Q9UKJ3 1502 aaKnown RBP10.76□□□□□ -0.69
LINC00461-216ENST00000515885 MZF1P28698 734 aaPredicted RBP10.76□□□□□ -0.69
LINC00461-216ENST00000515885 PTPN5P54829 565 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 MYT1Q01538 1121 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 LCE2DQ5TA82 110 aaPredicted RBP10.76□□□□□ -0.69
LINC00461-216ENST00000515885 ALG1LQ6GMV1 187 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 ETFBKMTQ8IXQ9 262 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 XAGE2Q96GT9 111 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 NGLY1Q96IV0 654 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 DNAJC2Q99543 621 aaKnown RBP10.76□□□□□ -0.69
LINC00461-216ENST00000515885 ARHGEF10LQ9HCE6 1279 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 PRKAG2Q9UGJ0 569 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 CFAP65Q6ZU64 1925 aaKnown RBP10.76□□□□□ -0.69
LINC00461-216ENST00000515885 CCNB3Q8WWL7 1395 aa10.76□□□□□ -0.69
LINC00461-216ENST00000515885 KIAA1107Q9UPP5 1409 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 NLRP1Q9C000 1473 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 KDM5DQ9BY66 1539 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 PDGFAP04085 211 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 GNA15P30679 374 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 TNNI2P48788 182 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 DNM1Q05193 864 aaKnown RBP10.75□□□□□ -0.69
LINC00461-216ENST00000515885 PPP1R26Q5T8A7 1209 aaPredicted RBP10.75□□□□□ -0.69
LINC00461-216ENST00000515885 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 EDEM1Q92611 657 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 TLL2Q9Y6L7 1015 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 MIA2Q96PC5 1412 aa10.75□□□□□ -0.69
LINC00461-216ENST00000515885 EML1O00423 815 aa10.74□□□□□ -0.69
LINC00461-216ENST00000515885 CDK2AP1O14519 115 aa10.74□□□□□ -0.69
LINC00461-216ENST00000515885 CTSHP09668 335 aa10.74□□□□□ -0.69
LINC00461-216ENST00000515885 DHX38Q92620 1227 aaKnown RBP10.74□□□□□ -0.69
LINC00461-216ENST00000515885 TRIM52Q96A61 297 aa10.74□□□□□ -0.69
LINC00461-216ENST00000515885 HRH3Q9Y5N1 445 aa10.74□□□□□ -0.69
LINC00461-216ENST00000515885 CASKIN1Q8WXD9 1431 aa10.74□□□□□ -0.69
LINC00461-216ENST00000515885 XIRP1Q702N8 1843 aaKnown RBP10.73□□□□□ -0.69
LINC00461-216ENST00000515885 TLR1Q15399 786 aa10.73□□□□□ -0.69
LINC00461-216ENST00000515885 LHX8Q68G74 356 aa10.73□□□□□ -0.69
LINC00461-216ENST00000515885 CCDC116Q8IYX3 515 aa10.73□□□□□ -0.69
LINC00461-216ENST00000515885 ALDH16A1Q8IZ83 802 aa10.73□□□□□ -0.69
LINC00461-216ENST00000515885 ZDHHC1Q8WTX9 485 aa10.73□□□□□ -0.69
LINC00461-216ENST00000515885 LNPKQ9C0E8 428 aa10.73□□□□□ -0.69
LINC00461-216ENST00000515885 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.73□□□□□ -0.69
LINC00461-216ENST00000515885 CHMP3Q9Y3E7 222 aa10.73□□□□□ -0.69
LINC00461-216ENST00000515885 DHX29Q7Z478 1369 aaKnown RBP10.73□□□□□ -0.69
LINC00461-216ENST00000515885 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
LINC00461-216ENST00000515885 ZAP70P43403 619 aa10.72□□□□□ -0.69
LINC00461-216ENST00000515885 DGKZQ13574 1117 aa10.72□□□□□ -0.69
LINC00461-216ENST00000515885 C11orf91Q3C1V1 193 aa10.72□□□□□ -0.69
LINC00461-216ENST00000515885 CSRNP1Q96S65 589 aa10.72□□□□□ -0.69
LINC00461-216ENST00000515885 SERTM1A2A2V5 107 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 USP5P45974 858 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 HIRAP54198 1017 aaPredicted RBP10.71□□□□□ -0.69
LINC00461-216ENST00000515885 ORC1Q13415 861 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 TEAD4Q15561 434 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 RC3H1Q5TC82 1133 aaKnown RBP10.71□□□□□ -0.69
LINC00461-216ENST00000515885 ZNF295-AS1Q8N0V1 137 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 NLRP2Q9NX02 1062 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 KLK14Q9P0G3 267 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 HCN4Q9Y3Q4 1203 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 AK5Q9Y6K8 562 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 ROBO1Q9Y6N7 1651 aa10.71□□□□□ -0.69
LINC00461-216ENST00000515885 ZC3H13Q5T200 1668 aaKnown RBP10.7□□□□□ -0.7
LINC00461-216ENST00000515885 FAM135BQ49AJ0 1406 aa10.7□□□□□ -0.7
LINC00461-216ENST00000515885 MPNDQ8N594 471 aa10.7□□□□□ -0.7
LINC00461-216ENST00000515885 CNKSR1Q969H4 720 aa10.7□□□□□ -0.7
LINC00461-216ENST00000515885 GMLQ99445 158 aa10.7□□□□□ -0.7
LINC00461-216ENST00000515885 KRTAP3-3Q9BYR6 98 aa10.7□□□□□ -0.7
LINC00461-216ENST00000515885 KRTAP3-2Q9BYR7 98 aa10.7□□□□□ -0.7
LINC00461-216ENST00000515885 ZNF644Q9H582 1327 aaPredicted RBP10.69□□□□□ -0.7
LINC00461-216ENST00000515885 SIAH2O43255 324 aa10.69□□□□□ -0.7
LINC00461-216ENST00000515885 ADH1CP00326 375 aa10.69□□□□□ -0.7
LINC00461-216ENST00000515885 NR3C2P08235 984 aa10.69□□□□□ -0.7
LINC00461-216ENST00000515885 ATP2B1P20020 1258 aa10.69□□□□□ -0.7
LINC00461-216ENST00000515885 NOS2P35228 1153 aa10.69□□□□□ -0.7
LINC00461-216ENST00000515885 RTN1Q16799 776 aa10.69□□□□□ -0.7
LINC00461-216ENST00000515885 MEX3CQ5U5Q3 659 aaKnown RBP10.69□□□□□ -0.7
LINC00461-216ENST00000515885 ANKLE1Q8NAG6 615 aa10.69□□□□□ -0.7
LINC00461-216ENST00000515885 FBF1Q8TES7 1133 aa10.69□□□□□ -0.7
LINC00461-216ENST00000515885 CRELD1Q96HD1 420 aa10.69□□□□□ -0.7
LINC00461-216ENST00000515885 ESYT1Q9BSJ8 1104 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms