RNA–Protein interactions for RNA: ENST00000515809.1

RBM47-215, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 229 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-215ENST00000515809 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
RBM47-215ENST00000515809 STYK1Q6J9G0 422 aa17.78■□□□□ 0.44
RBM47-215ENST00000515809 MASTLQ96GX5 879 aa17.78■□□□□ 0.44
RBM47-215ENST00000515809 RBM17Q96I25 401 aaKnown RBP17.78■□□□□ 0.44
RBM47-215ENST00000515809 SUCLG2Q96I99 432 aa17.78■□□□□ 0.44
RBM47-215ENST00000515809 LRRC37AA6NMS7 1700 aa17.78■□□□□ 0.44
RBM47-215ENST00000515809 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.44
RBM47-215ENST00000515809 CHMP3Q9Y3E7 222 aa17.77■□□□□ 0.44
RBM47-215ENST00000515809 LRRFIP2Q9Y608 721 aaKnown RBP17.77■□□□□ 0.44
RBM47-215ENST00000515809 ZBTB7BO15156 539 aaPredicted RBP17.76■□□□□ 0.43
RBM47-215ENST00000515809 DPEP1P16444 411 aa17.76■□□□□ 0.43
RBM47-215ENST00000515809 CHRNA5P30532 468 aa17.76■□□□□ 0.43
RBM47-215ENST00000515809 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
RBM47-215ENST00000515809 CNKSR1Q969H4 720 aa17.76■□□□□ 0.43
RBM47-215ENST00000515809 ZNF622Q969S3 477 aaKnown RBP eCLIP17.76■□□□□ 0.43
RBM47-215ENST00000515809 SYT17Q9BSW7 474 aa17.76■□□□□ 0.43
RBM47-215ENST00000515809 BICC1Q9H694 974 aaKnown RBP17.76■□□□□ 0.43
RBM47-215ENST00000515809 SLX4Q8IY92 1834 aa17.76■□□□□ 0.43
RBM47-215ENST00000515809 A0A1B0GUL6 1792 aa17.76■□□□□ 0.43
RBM47-215ENST00000515809 A0A0G2JLW4 131 aa17.75■□□□□ 0.43
RBM47-215ENST00000515809 ALDH1B1P30837 517 aa17.75■□□□□ 0.43
RBM47-215ENST00000515809 FOXO4P98177 505 aa17.75■□□□□ 0.43
RBM47-215ENST00000515809 NLGN2Q8NFZ4 835 aa17.75■□□□□ 0.43
RBM47-215ENST00000515809 TTLL11Q8NHH1 800 aa17.75■□□□□ 0.43
RBM47-215ENST00000515809 CDC5LQ99459 802 aaKnown RBP17.75■□□□□ 0.43
RBM47-215ENST00000515809 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
RBM47-215ENST00000515809 HOXA10P31260 410 aaPredicted RBP17.74■□□□□ 0.43
RBM47-215ENST00000515809 FAM161AQ3B820 660 aa17.74■□□□□ 0.43
RBM47-215ENST00000515809 RABL6Q3YEC7 729 aaPredicted RBP17.74■□□□□ 0.43
RBM47-215ENST00000515809 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
RBM47-215ENST00000515809 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
RBM47-215ENST00000515809 CRAMP1Q96RY5 1269 aa17.74■□□□□ 0.43
RBM47-215ENST00000515809 CRBNQ96SW2 442 aa17.74■□□□□ 0.43
RBM47-215ENST00000515809 ANKRD18BA2A2Z9 1011 aa17.73■□□□□ 0.43
RBM47-215ENST00000515809 NEFLP07196 543 aa17.73■□□□□ 0.43
RBM47-215ENST00000515809 CSF1RP07333 972 aa17.73■□□□□ 0.43
RBM47-215ENST00000515809 IFIT5Q13325 482 aaKnown RBP17.73■□□□□ 0.43
RBM47-215ENST00000515809 GRAPQ13588 217 aa17.73■□□□□ 0.43
RBM47-215ENST00000515809 AAMPQ13685 434 aa17.73■□□□□ 0.43
RBM47-215ENST00000515809 CCDC57Q2TAC2 916 aa17.73■□□□□ 0.43
RBM47-215ENST00000515809 EPHA10Q5JZY3 1008 aa17.73■□□□□ 0.43
RBM47-215ENST00000515809 GRAPLQ8TC17 118 aaPredicted RBP17.73■□□□□ 0.43
RBM47-215ENST00000515809 KAZALD1Q96I82 304 aa17.73■□□□□ 0.43
RBM47-215ENST00000515809 GREM2Q9H772 168 aa17.73■□□□□ 0.43
RBM47-215ENST00000515809 TAF7LQ5H9L4 462 aa17.72■□□□□ 0.43
RBM47-215ENST00000515809 TMC4Q7Z404 712 aa17.72■□□□□ 0.43
RBM47-215ENST00000515809 TTLL6Q8N841 843 aa17.72■□□□□ 0.43
RBM47-215ENST00000515809 ANKRD44Q8N8A2 993 aa17.72■□□□□ 0.43
RBM47-215ENST00000515809 ITGA6P23229 1130 aa17.71■□□□□ 0.43
RBM47-215ENST00000515809 IGHMBP2P38935 993 aaKnown RBP17.71■□□□□ 0.43
RBM47-215ENST00000515809 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.43
RBM47-215ENST00000515809 PRPF40BQ6NWY9 871 aaKnown RBP17.71■□□□□ 0.43
RBM47-215ENST00000515809 ANKRD18AQ8IVF6 992 aa17.71■□□□□ 0.43
RBM47-215ENST00000515809 TMX4Q9H1E5 349 aaPredicted RBP17.71■□□□□ 0.43
RBM47-215ENST00000515809 C1orf115Q9H7X2 142 aa17.71■□□□□ 0.43
RBM47-215ENST00000515809 ZBTB40Q9NUA8 1239 aa17.71■□□□□ 0.43
RBM47-215ENST00000515809 COL4A1P02462 1669 aa17.71■□□□□ 0.42
RBM47-215ENST00000515809 FER1L6Q2WGJ9 1857 aa17.7■□□□□ 0.42
RBM47-215ENST00000515809 PPEF1O14829 653 aaPredicted RBP17.7■□□□□ 0.42
RBM47-215ENST00000515809 MTX1Q13505 466 aa17.7■□□□□ 0.42
RBM47-215ENST00000515809 SRGAP3O43295 1099 aa17.69■□□□□ 0.42
RBM47-215ENST00000515809 BBOX1O75936 387 aa17.69■□□□□ 0.42
RBM47-215ENST00000515809 KCNA3P22001 575 aa17.69■□□□□ 0.42
RBM47-215ENST00000515809 SOGA3Q5TF21 947 aa17.69■□□□□ 0.42
RBM47-215ENST00000515809 SEC31BQ9NQW1 1179 aa17.69■□□□□ 0.42
RBM47-215ENST00000515809 HMMRO75330 724 aa17.68■□□□□ 0.42
RBM47-215ENST00000515809 CELF1Q92879 486 aaKnown RBP17.68■□□□□ 0.42
RBM47-215ENST00000515809 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
RBM47-215ENST00000515809 BCS1LQ9Y276 419 aa17.68■□□□□ 0.42
RBM47-215ENST00000515809 LTBP1Q14766 1721 aa17.67■□□□□ 0.42
RBM47-215ENST00000515809 RPS8P62241 208 aaKnown RBP17.67■□□□□ 0.42
RBM47-215ENST00000515809 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
RBM47-215ENST00000515809 CEP85Q6P2H3 762 aa17.67■□□□□ 0.42
RBM47-215ENST00000515809 RPAP2Q8IXW5 612 aaPredicted RBP17.67■□□□□ 0.42
RBM47-215ENST00000515809 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
RBM47-215ENST00000515809 WWC3Q9ULE0 1092 aa17.67■□□□□ 0.42
RBM47-215ENST00000515809 SRCAPQ6ZRS2 3230 aa17.65■□□□□ 0.42
RBM47-215ENST00000515809 DCAF8L1A6NGE4 600 aa17.65■□□□□ 0.42
RBM47-215ENST00000515809 ATP8B2P98198 1209 aa17.65■□□□□ 0.42
RBM47-215ENST00000515809 GRIPAP1Q4V328 841 aa17.65■□□□□ 0.42
RBM47-215ENST00000515809 CC2D2BQ6DHV5 1058 aa17.65■□□□□ 0.42
RBM47-215ENST00000515809 EXOC6Q8TAG9 804 aa17.65■□□□□ 0.42
RBM47-215ENST00000515809 CNNM1Q9NRU3 951 aa17.65■□□□□ 0.42
RBM47-215ENST00000515809 BSDC1Q9NW68 430 aaPredicted RBP17.65■□□□□ 0.42
RBM47-215ENST00000515809 ATP6V0A2Q9Y487 856 aa17.65■□□□□ 0.42
RBM47-215ENST00000515809 CCDC93Q567U6 631 aa17.64■□□□□ 0.41
RBM47-215ENST00000515809 LDHAL6AQ6ZMR3 332 aa17.64■□□□□ 0.41
RBM47-215ENST00000515809 FBXO3Q9UK99 471 aa17.64■□□□□ 0.41
RBM47-215ENST00000515809 CCDC88AQ3V6T2 1871 aa17.64■□□□□ 0.41
RBM47-215ENST00000515809 PNMA6EA0A0J9YXQ4 647 aa17.63■□□□□ 0.41
RBM47-215ENST00000515809 C21orf2O43822 256 aa17.63■□□□□ 0.41
RBM47-215ENST00000515809 GPR162Q16538 588 aa17.63■□□□□ 0.41
RBM47-215ENST00000515809 SP8Q8IXZ3 490 aa17.63■□□□□ 0.41
RBM47-215ENST00000515809 SSH3Q8TE77 659 aa17.63■□□□□ 0.41
RBM47-215ENST00000515809 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
RBM47-215ENST00000515809 ARAP2Q8WZ64 1704 aa17.63■□□□□ 0.41
RBM47-215ENST00000515809 RFX5P48382 616 aaPredicted RBP17.62■□□□□ 0.41
RBM47-215ENST00000515809 POLA2Q14181 598 aa17.62■□□□□ 0.41
RBM47-215ENST00000515809 ZNF594Q96JF6 807 aaPredicted RBP17.62■□□□□ 0.41
RBM47-215ENST00000515809 COPRSQ9NQ92 184 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms