RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 LPIN3Q9BQK8 851 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 PPP1R12CQ9BZL4 782 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 USP20Q9Y2K6 914 aa6.76□□□□□ -1.33
HERC4-215ENST00000515753 USP17L15C9J2P7 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L10C9JJH3 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L13C9JLJ4 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L12C9JPN9 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L11C9JVI0 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L21D6R901 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L18D6R9N7 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L22D6RA61 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L17D6RBQ6 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L19D6RCP7 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L20D6RJB6 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 EPB42P16452 691 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 LMOD1P29536 600 aaPredicted RBP6.75□□□□□ -1.33
HERC4-215ENST00000515753 USP17L24Q0WX57 530 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 GRIK5Q16478 980 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 ELMSAN1Q6PJG2 1045 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 DHX32Q7L7V1 743 aaKnown RBP6.75□□□□□ -1.33
HERC4-215ENST00000515753 IFT43Q96FT9 208 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 ZMYND15Q9H091 742 aa6.75□□□□□ -1.33
HERC4-215ENST00000515753 QTRT2Q9H974 415 aaKnown RBP6.75□□□□□ -1.33
HERC4-215ENST00000515753 RARAP10276 462 aa6.74□□□□□ -1.33
HERC4-215ENST00000515753 IREB2P48200 963 aaKnown RBP6.74□□□□□ -1.33
HERC4-215ENST00000515753 ERICH6Q7L0X2 663 aa6.74□□□□□ -1.33
HERC4-215ENST00000515753 NBPF11Q86T75 865 aa6.74□□□□□ -1.33
HERC4-215ENST00000515753 SSBP4Q9BWG4 385 aaPredicted RBP6.74□□□□□ -1.33
HERC4-215ENST00000515753 MICAL2O94851 1124 aa6.73□□□□□ -1.33
HERC4-215ENST00000515753 MAP3K6O95382 1288 aa6.73□□□□□ -1.33
HERC4-215ENST00000515753 ARSDP51689 593 aa6.73□□□□□ -1.33
HERC4-215ENST00000515753 WFDC12Q8WWY7 111 aa6.73□□□□□ -1.33
HERC4-215ENST00000515753 VRTNQ9H8Y1 702 aa6.73□□□□□ -1.33
HERC4-215ENST00000515753 FAM196BA6NMK8 535 aa6.72□□□□□ -1.33
HERC4-215ENST00000515753 PCSK7Q16549 785 aa6.72□□□□□ -1.33
HERC4-215ENST00000515753 FBXO11Q86XK2 927 aa6.72□□□□□ -1.33
HERC4-215ENST00000515753 WFDC8Q8IUA0 241 aa6.72□□□□□ -1.33
HERC4-215ENST00000515753 TRPM4Q8TD43 1214 aa6.72□□□□□ -1.33
HERC4-215ENST00000515753 VTI1AQ96AJ9 217 aa6.72□□□□□ -1.33
HERC4-215ENST00000515753 ARXQ96QS3 562 aa6.72□□□□□ -1.33
HERC4-215ENST00000515753 SMG9Q9H0W8 520 aaKnown RBP6.72□□□□□ -1.33
HERC4-215ENST00000515753 OPLAHO14841 1288 aa6.71□□□□□ -1.34
HERC4-215ENST00000515753 HYAL3O43820 417 aaPredicted RBP6.71□□□□□ -1.34
HERC4-215ENST00000515753 NOS3P29474 1203 aa6.71□□□□□ -1.34
HERC4-215ENST00000515753 WEE1P30291 646 aa6.71□□□□□ -1.34
HERC4-215ENST00000515753 C11orf91Q3C1V1 193 aa6.71□□□□□ -1.34
HERC4-215ENST00000515753 CDCA8Q53HL2 280 aa6.71□□□□□ -1.34
HERC4-215ENST00000515753 KRTAP9-9Q9BYP9 154 aa6.71□□□□□ -1.34
HERC4-215ENST00000515753 KRTAP9-4Q9BYQ2 154 aa6.71□□□□□ -1.34
HERC4-215ENST00000515753 FRRS1LQ9P0K9 344 aa6.71□□□□□ -1.34
HERC4-215ENST00000515753 LRFN2Q9ULH4 789 aa6.71□□□□□ -1.34
HERC4-215ENST00000515753 RTCBQ9Y3I0 505 aaKnown RBP6.71□□□□□ -1.34
HERC4-215ENST00000515753 J3QW42 95 aa6.7□□□□□ -1.34
HERC4-215ENST00000515753 DEAF1O75398 565 aaPredicted RBP6.7□□□□□ -1.34
HERC4-215ENST00000515753 EIF2AK2P19525 551 aaKnown RBP6.7□□□□□ -1.34
HERC4-215ENST00000515753 GPLD1P80108 840 aa6.7□□□□□ -1.34
HERC4-215ENST00000515753 LRP8Q14114 963 aa6.7□□□□□ -1.34
HERC4-215ENST00000515753 RGL4Q8IZJ4 473 aa6.7□□□□□ -1.34
HERC4-215ENST00000515753 CMTR1Q8N1G2 835 aaKnown RBP6.7□□□□□ -1.34
HERC4-215ENST00000515753 DTWD1Q8N5C7 304 aa6.7□□□□□ -1.34
HERC4-215ENST00000515753 MEGF10Q96KG7 1140 aa6.7□□□□□ -1.34
HERC4-215ENST00000515753 FOXO3O43524 673 aa6.68□□□□□ -1.34
HERC4-215ENST00000515753 XYLBO75191 536 aa6.68□□□□□ -1.34
HERC4-215ENST00000515753 ALX3O95076 343 aa6.68□□□□□ -1.34
HERC4-215ENST00000515753 GDF6Q6KF10 455 aaPredicted RBP6.68□□□□□ -1.34
HERC4-215ENST00000515753 IGF2-ASQ6U949 168 aa6.68□□□□□ -1.34
HERC4-215ENST00000515753 TREML1Q86YW5 311 aa6.68□□□□□ -1.34
HERC4-215ENST00000515753 NSUN5Q96P11 429 aaKnown RBP6.68□□□□□ -1.34
HERC4-215ENST00000515753 TLR7Q9NYK1 1049 aaKnown RBP6.68□□□□□ -1.34
HERC4-215ENST00000515753 NRLP54845 237 aa6.67□□□□□ -1.34
HERC4-215ENST00000515753 FAM200AQ8TCP9 573 aa6.67□□□□□ -1.34
HERC4-215ENST00000515753 TTC9Q92623 222 aa6.67□□□□□ -1.34
HERC4-215ENST00000515753 PLD4Q96BZ4 506 aa6.67□□□□□ -1.34
HERC4-215ENST00000515753 MYO19Q96H55 970 aa6.67□□□□□ -1.34
HERC4-215ENST00000515753 PRIMPOLQ96LW4 560 aa6.67□□□□□ -1.34
HERC4-215ENST00000515753 LOC102724428A0A0B4J2F2 783 aa6.66□□□□□ -1.34
HERC4-215ENST00000515753 DLL1O00548 723 aa6.66□□□□□ -1.34
HERC4-215ENST00000515753 MMP20O60882 483 aa6.66□□□□□ -1.34
HERC4-215ENST00000515753 SIK1P57059 783 aa6.66□□□□□ -1.34
HERC4-215ENST00000515753 COX20Q5RI15 118 aa6.66□□□□□ -1.34
HERC4-215ENST00000515753 CFAP70Q5T0N1 1121 aa6.66□□□□□ -1.34
HERC4-215ENST00000515753 C14orf37Q86TY3 774 aa6.66□□□□□ -1.34
HERC4-215ENST00000515753 IL22RA1Q8N6P7 574 aa6.66□□□□□ -1.34
HERC4-215ENST00000515753 PSAPP07602 524 aa6.65□□□□□ -1.34
HERC4-215ENST00000515753 RFX1P22670 979 aa6.65□□□□□ -1.34
HERC4-215ENST00000515753 ARID4AP29374 1257 aaPredicted RBP6.65□□□□□ -1.34
HERC4-215ENST00000515753 FKBP5Q13451 457 aaPredicted RBP6.65□□□□□ -1.34
HERC4-215ENST00000515753 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
HERC4-215ENST00000515753 C11orf16Q9NQ32 467 aa6.65□□□□□ -1.34
HERC4-215ENST00000515753 ZNF777Q9ULD5 760 aaPredicted RBP6.65□□□□□ -1.34
HERC4-215ENST00000515753 KCNMB2Q9Y691 235 aa6.65□□□□□ -1.34
HERC4-215ENST00000515753 EGFRP00533 1210 aa6.64□□□□□ -1.35
HERC4-215ENST00000515753 GHRHP01286 108 aa6.64□□□□□ -1.35
HERC4-215ENST00000515753 PRR23CQ6ZRP0 262 aa6.64□□□□□ -1.35
HERC4-215ENST00000515753 AKTIPQ9H8T0 292 aa6.64□□□□□ -1.35
HERC4-215ENST00000515753 PRMT3O60678 531 aa6.63□□□□□ -1.35
HERC4-215ENST00000515753 ETFBKMTQ8IXQ9 262 aa6.63□□□□□ -1.35
HERC4-215ENST00000515753 AGGF1Q8N302 714 aaeCLIP6.63□□□□□ -1.35
HERC4-215ENST00000515753 SAP130Q9H0E3 1048 aa6.63□□□□□ -1.35
HERC4-215ENST00000515753 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms