RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 H0YGN5 161 aa12.24□□□□□ -0.45
CSNK1A1-206ENST00000515748 APAF1O14727 1248 aa12.24□□□□□ -0.45
CSNK1A1-206ENST00000515748 CEP290O15078 2479 aa12.24□□□□□ -0.45
CSNK1A1-206ENST00000515748 EN2P19622 333 aaPredicted RBP12.24□□□□□ -0.45
CSNK1A1-206ENST00000515748 TAF7Q15545 349 aaPredicted RBP12.24□□□□□ -0.45
CSNK1A1-206ENST00000515748 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
CSNK1A1-206ENST00000515748 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
CSNK1A1-206ENST00000515748 TTC5Q8N0Z6 440 aa12.24□□□□□ -0.45
CSNK1A1-206ENST00000515748 SNED1Q8TER0 1413 aa12.24□□□□□ -0.45
CSNK1A1-206ENST00000515748 HEG1Q9ULI3 1381 aa12.23□□□□□ -0.45
CSNK1A1-206ENST00000515748 NOM1Q5C9Z4 860 aaKnown RBP12.23□□□□□ -0.45
CSNK1A1-206ENST00000515748 KRT26Q7Z3Y9 468 aa12.23□□□□□ -0.45
CSNK1A1-206ENST00000515748 NGEFQ8N5V2 710 aa12.23□□□□□ -0.45
CSNK1A1-206ENST00000515748 BCL2L13Q9BXK5 485 aa12.23□□□□□ -0.45
CSNK1A1-206ENST00000515748 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
CSNK1A1-206ENST00000515748 ZNRF3Q9ULT6 936 aa12.23□□□□□ -0.45
CSNK1A1-206ENST00000515748 RRP7AQ9Y3A4 280 aaKnown RBP12.23□□□□□ -0.45
CSNK1A1-206ENST00000515748 DLG5Q8TDM6 1919 aa12.22□□□□□ -0.45
CSNK1A1-206ENST00000515748 H7C1D1 291 aa12.22□□□□□ -0.45
CSNK1A1-206ENST00000515748 PPIP5K2O43314 1243 aa12.22□□□□□ -0.45
CSNK1A1-206ENST00000515748 A1BGP04217 495 aa12.22□□□□□ -0.45
CSNK1A1-206ENST00000515748 CLEC4GQ6UXB4 293 aa12.22□□□□□ -0.45
CSNK1A1-206ENST00000515748 ZNF496Q96IT1 587 aaPredicted RBP12.22□□□□□ -0.45
CSNK1A1-206ENST00000515748 FMNL2Q96PY5 1086 aa12.22□□□□□ -0.45
CSNK1A1-206ENST00000515748 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
CSNK1A1-206ENST00000515748 TEX13AQ9BXU3 409 aaPredicted RBP12.22□□□□□ -0.45
CSNK1A1-206ENST00000515748 BCORQ6W2J9 1755 aa12.21□□□□□ -0.45
CSNK1A1-206ENST00000515748 SHTN1A0MZ66 631 aa12.21□□□□□ -0.45
CSNK1A1-206ENST00000515748 CALD1Q05682 793 aaKnown RBP12.21□□□□□ -0.45
CSNK1A1-206ENST00000515748 AOC3Q16853 763 aa12.21□□□□□ -0.45
CSNK1A1-206ENST00000515748 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
CSNK1A1-206ENST00000515748 DZIP3Q86Y13 1208 aaKnown RBP12.21□□□□□ -0.45
CSNK1A1-206ENST00000515748 VPS33BQ9H267 617 aa12.21□□□□□ -0.45
CSNK1A1-206ENST00000515748 KIAA0100Q14667 2235 aaKnown RBP12.21□□□□□ -0.46
CSNK1A1-206ENST00000515748 KDM3BQ7LBC6 1761 aa12.2□□□□□ -0.46
CSNK1A1-206ENST00000515748 FAM177BA6PVY3 158 aa12.2□□□□□ -0.46
CSNK1A1-206ENST00000515748 CHL1O00533 1208 aa12.2□□□□□ -0.46
CSNK1A1-206ENST00000515748 FKTNO75072 461 aa12.2□□□□□ -0.46
CSNK1A1-206ENST00000515748 TNIP1Q15025 636 aa12.2□□□□□ -0.46
CSNK1A1-206ENST00000515748 RASAL3Q86YV0 1011 aa12.2□□□□□ -0.46
CSNK1A1-206ENST00000515748 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
CSNK1A1-206ENST00000515748 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
CSNK1A1-206ENST00000515748 TCERG1O14776 1098 aaKnown RBP12.19□□□□□ -0.46
CSNK1A1-206ENST00000515748 KCNQ3O43525 872 aa12.19□□□□□ -0.46
CSNK1A1-206ENST00000515748 ZNF853P0CG23 659 aa12.19□□□□□ -0.46
CSNK1A1-206ENST00000515748 NEUROD2Q15784 382 aa12.19□□□□□ -0.46
CSNK1A1-206ENST00000515748 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
CSNK1A1-206ENST00000515748 DCPSQ96C86 337 aaKnown RBP12.19□□□□□ -0.46
CSNK1A1-206ENST00000515748 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
CSNK1A1-206ENST00000515748 IL16Q14005 1332 aa12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 RANBP2P49792 3224 aaKnown RBP12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 ADM5C9JUS6 153 aa12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 RAD17O75943 681 aa12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 SNRPA1P09661 255 aaKnown RBP12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 GTF2E1P29083 439 aaPredicted RBP12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 TM4SF4P48230 202 aa12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 EIF4A1P60842 406 aaKnown RBP12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 CRY2Q49AN0 593 aa12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 SAMD7Q7Z3H4 446 aa12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 SLC51AQ86UW1 340 aa12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 MIER1Q8N108 512 aa12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 NIP7Q9Y221 180 aaKnown RBP eCLIP12.18□□□□□ -0.46
CSNK1A1-206ENST00000515748 HOXA10P31260 410 aaPredicted RBP12.17□□□□□ -0.46
CSNK1A1-206ENST00000515748 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
CSNK1A1-206ENST00000515748 MICALL2Q8IY33 904 aa12.17□□□□□ -0.46
CSNK1A1-206ENST00000515748 COL25A1Q9BXS0 654 aaPredicted RBP12.17□□□□□ -0.46
CSNK1A1-206ENST00000515748 R3HDMLQ9H3Y0 253 aa12.17□□□□□ -0.46
CSNK1A1-206ENST00000515748 ZNF652Q9Y2D9 606 aa12.17□□□□□ -0.46
CSNK1A1-206ENST00000515748 TRIM17Q9Y577 477 aa12.17□□□□□ -0.46
CSNK1A1-206ENST00000515748 GNAI1P63096 354 aa12.16□□□□□ -0.46
CSNK1A1-206ENST00000515748 MIS18AQ9NYP9 233 aa12.16□□□□□ -0.46
CSNK1A1-206ENST00000515748 ZNF521Q96K83 1311 aa12.15□□□□□ -0.46
CSNK1A1-206ENST00000515748 HOXB7P09629 217 aa12.15□□□□□ -0.46
CSNK1A1-206ENST00000515748 TBC1D10BQ4KMP7 808 aaPredicted RBP12.15□□□□□ -0.46
CSNK1A1-206ENST00000515748 RBM26Q5T8P6 1007 aaKnown RBP12.15□□□□□ -0.46
CSNK1A1-206ENST00000515748 OTOP1Q7RTM1 612 aa12.15□□□□□ -0.46
CSNK1A1-206ENST00000515748 RPGRQ92834 1020 aaKnown RBP12.15□□□□□ -0.46
CSNK1A1-206ENST00000515748 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
CSNK1A1-206ENST00000515748 CENPFP49454 3210 aa12.15□□□□□ -0.46
CSNK1A1-206ENST00000515748 ERBB4Q15303 1308 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 BRCA2P51587 3418 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 SCN7AQ01118 1682 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 PPEF1O14829 653 aaPredicted RBP12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 EGFRP00533 1210 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 WDR63Q8IWG1 891 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 DPF2Q92785 391 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 ARMC5Q96C12 935 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 RBM17Q96I25 401 aaKnown RBP12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 CRAMP1Q96RY5 1269 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 CFHR5Q9BXR6 569 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 TMX4Q9H1E5 349 aaPredicted RBP12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 ZBTB12Q9Y330 459 aaPredicted RBP12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 HTTP42858 3142 aa12.14□□□□□ -0.47
CSNK1A1-206ENST00000515748 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
CSNK1A1-206ENST00000515748 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms